PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	gene-IMY05_010G0141300 View in Genome Browser
Position	CM029808.1:12541402-12548632 (-) 7230bp
Gene Type	gene
Gene Description (Protein Product)	Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome
Organism	Salix suchowensis
Also AS	AT5G17410

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	gene-IMY05_014G0102600 Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome gene-IMY05_014G0072900 Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome gene-IMY05_C4595000200 Belongs to the protein kinase superfamily
Regulatory gene	gene-IMY05_002G0021500 Protein BASIC PENTACYSTEINE6-like gene-IMY05_004G0119500 Protein BASIC PENTACYSTEINE4-like gene-IMY05_004G0124700 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0000226	microtubule cytoskeleton organization	BP
GO:0000278	mitotic cell cycle	BP
GO:0000280	nuclear division	BP
GO:0000923	equatorial microtubule organizing center	CC
GO:0000930	gamma-tubulin complex	CC
GO:0003674	molecular_function	MF
GO:0005198	structural molecule activity	MF
GO:0005200	structural constituent of cytoskeleton	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005635	nuclear envelope	CC
GO:0005654	nucleoplasm	CC
GO:0005737	cytoplasm	CC
GO:0005813	centrosome	CC
GO:0005815	microtubule organizing center	CC
GO:0005856	cytoskeleton	CC
GO:0005874	microtubule	CC
GO:0005881	cytoplasmic microtubule	CC
GO:0005938	cell cortex	CC
GO:0006996	organelle organization	BP
GO:0007010	cytoskeleton organization	BP
GO:0007017	microtubule-based process	BP
GO:0007020	microtubule nucleation	BP
GO:0007049	cell cycle	BP
GO:0007051	spindle organization	BP
GO:0007052	mitotic spindle organization	BP
GO:0007098	centrosome cycle	BP
GO:0007275	multicellular organism development	BP
GO:0008092	cytoskeletal protein binding	MF
GO:0008104	protein localization	BP
GO:0008150	biological_process	BP
GO:0008275	gamma-tubulin small complex	CC
GO:0009987	cellular process	BP
GO:0010638	positive regulation of organelle organization	BP
GO:0010968	regulation of microtubule nucleation	BP
GO:0012505	endomembrane system	CC
GO:0015630	microtubule cytoskeleton	CC
GO:0015631	tubulin binding	MF
GO:0016043	cellular component organization	BP
GO:0022402	cell cycle process	BP
GO:0022414	reproductive process	BP
GO:0022607	cellular component assembly	BP
GO:0030863	cortical cytoskeleton	CC
GO:0030981	cortical microtubule cytoskeleton	CC
GO:0031023	microtubule organizing center organization	BP
GO:0031109	microtubule polymerization or depolymerization	BP
GO:0031110	regulation of microtubule polymerization or depolymerization	BP
GO:0031112	positive regulation of microtubule polymerization or depolymerization	BP
GO:0031113	regulation of microtubule polymerization	BP
GO:0031116	positive regulation of microtubule polymerization	BP
GO:0031122	cytoplasmic microtubule organization	BP
GO:0031334	positive regulation of protein-containing complex assembly	BP
GO:0031503	protein-containing complex localization	BP
GO:0031967	organelle envelope	CC
GO:0031974	membrane-enclosed lumen	CC
GO:0031975	envelope	CC
GO:0031981	nuclear lumen	CC
GO:0032153	cell division site	CC
GO:0032155	obsolete cell division site part	CC
GO:0032271	regulation of protein polymerization	BP
GO:0032273	positive regulation of protein polymerization	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032886	regulation of microtubule-based process	BP
GO:0032991	protein-containing complex	CC
GO:0033036	macromolecule localization	BP
GO:0033043	regulation of organelle organization	BP
GO:0033566	gamma-tubulin complex localization	BP
GO:0034613	protein localization	BP
GO:0034622	protein-containing complex assembly	BP
GO:0034629	protein-containing complex localization	BP
GO:0043015	gamma-tubulin binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0043254	regulation of protein-containing complex assembly	BP
GO:0043933	protein-containing complex organization	BP
GO:0044085	cellular component biogenesis	BP
GO:0044087	regulation of cellular component biogenesis	BP
GO:0044089	positive regulation of cellular component biogenesis	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044428	obsolete nuclear part	CC
GO:0044430	obsolete cytoskeletal part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044448	obsolete cell cortex part	CC
GO:0044450	obsolete microtubule organizing center part	CC
GO:0044464	obsolete cell part	CC
GO:0046785	microtubule polymerization	BP
GO:0048229	gametophyte development	BP
GO:0048285	organelle fission	BP
GO:0048518	positive regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0048856	anatomical structure development	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051128	regulation of cellular component organization	BP
GO:0051130	positive regulation of cellular component organization	BP
GO:0051179	localization	BP
GO:0051225	spindle assembly	BP
GO:0051258	protein polymerization	BP
GO:0051298	centrosome duplication	BP
GO:0051321	meiotic cell cycle	BP
GO:0051415	microtubule nucleation by interphase microtubule organizing center	BP
GO:0051418	microtubule nucleation by microtubule organizing center	BP
GO:0051493	regulation of cytoskeleton organization	BP
GO:0051495	positive regulation of cytoskeleton organization	BP
GO:0051641	cellular localization	BP
GO:0055028	cortical microtubule	CC
GO:0065003	protein-containing complex assembly	BP
GO:0065007	biological regulation	BP
GO:0070013	intracellular organelle lumen	CC
GO:0070507	regulation of microtubule cytoskeleton organization	BP
GO:0070727	cellular macromolecule localization	BP
GO:0070925	organelle assembly	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0071944	cell periphery	CC
GO:0090063	positive regulation of microtubule nucleation	BP
GO:0090307	mitotic spindle assembly	BP
GO:0097435	supramolecular fiber organization	BP
GO:0099080	supramolecular complex	CC
GO:0099081	supramolecular polymer	CC
GO:0099512	supramolecular fiber	CC
GO:0099513	polymeric cytoskeletal fiber	CC
GO:0099568	cytoplasmic region	CC
GO:0140014	mitotic nuclear division	BP
GO:1902850	microtubule cytoskeleton organization involved in mitosis	BP
GO:1902903	regulation of supramolecular fiber organization	BP
GO:1902905	positive regulation of supramolecular fiber organization	BP
GO:1903047	mitotic cell cycle process	BP