PPGR - Gene Detail

Basic Information

Gene ID	gene-IMY05_010G0157600 View in Genome Browser
Position	CM029808.1:13684441-13687412 (-) 2971bp
Gene Type	gene
Gene Description (Protein Product)	BTB POZ and MATH domain-containing protein
Organism	Salix suchowensis
Also AS	AT2G39760

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-IMY05_017G0015100 Component of the EKC KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity

gene-IMY05_C4695000200 Cullin-domain-containing protein

gene-IMY05_016G0134300 Homeobox-leucine zipper protein

Regulatory gene

gene-IMY05_001G0031600 Myb-like DNA-binding domain

gene-IMY05_001G0043400 Transcription factor

gene-IMY05_001G0045500 Transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0006950	response to stress	BP
GO:0006970	response to osmotic stress	BP
GO:0008150	biological_process	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009651	response to salt stress	BP
GO:0009987	cellular process	BP
GO:0019222	regulation of metabolic process	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031396	regulation of protein ubiquitination	BP
GO:0031399	regulation of protein modification process	BP
GO:0032268	regulation of protein metabolic process	BP
GO:0033554	cellular response to stress	BP
GO:0042802	identical protein binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051246	regulation of protein metabolic process	BP
GO:0051716	cellular response to stimulus	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0071214	cellular response to abiotic stimulus	BP
GO:0071470	cellular response to osmotic stress	BP
GO:0071472	cellular response to salt stress	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0104004	cellular response to environmental stimulus	BP
GO:1903320	regulation of protein modification by small protein conjugation or removal	BP