PPGR - Gene Detail

Basic Information

Gene ID	gene-IMY05_C0883000300 View in Genome Browser
Position	JAEQKX010000110.1:77767-83203 (+) 5436bp
Gene Type	gene
Gene Description (Protein Product)	Ras GTPase-activating protein-binding protein
Organism	Salix suchowensis
Also AS	AT5G60980

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-IMY05_C4687000400 Cysteine proteinase

gene-IMY05_C4580000500 Rnase l inhibitor-type atp binding cassette protein

gene-IMY05_C3926000300 Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003723	RNA binding	MF
GO:0003729	mRNA binding	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006464	protein modification process	BP
GO:0006508	proteolysis	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006914	autophagy	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009987	cellular process	BP
GO:0010494	cytoplasmic stress granule	CC
GO:0016236	macroautophagy	BP
GO:0016579	protein deubiquitination	BP
GO:0019538	protein metabolic process	BP
GO:0032386	regulation of intracellular transport	BP
GO:0032879	regulation of localization	BP
GO:0032991	protein-containing complex	CC
GO:0034517	ribophagy	BP
GO:0035770	ribonucleoprotein granule	CC
GO:0035973	aggrephagy	BP
GO:0036211	protein modification process	BP
GO:0036464	cytoplasmic ribonucleoprotein granule	CC
GO:0043021	ribonucleoprotein complex binding	MF
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043412	macromolecule modification	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0044877	protein-containing complex binding	MF
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051049	regulation of transport	BP
GO:0060341	regulation of cellular localization	BP
GO:0060627	regulation of vesicle-mediated transport	BP
GO:0060628	regulation of ER to Golgi vesicle-mediated transport	BP
GO:0061912	selective autophagy	BP
GO:0061919	process utilizing autophagic mechanism	BP
GO:0065007	biological regulation	BP
GO:0070646	protein modification by small protein removal	BP
GO:0070647	protein modification by small protein conjugation or removal	BP
GO:0071704	organic substance metabolic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:1901363	heterocyclic compound binding	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1905538	polysome binding	MF
GO:1990861	Ubp3-Bre5 deubiquitination complex	CC
GO:1990904	ribonucleoprotein complex	CC