Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
gene-IMY05_C4383000100
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Position
JAEQKX010000633.1:369-1110 (-)
741bp
Gene Type
gene
Gene Description (Protein Product)
Nucleoside diphosphate kinase
Organism
Salix suchowensis
Also AS AT4G09320

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-IMY05_C4546000100 Thymidylate kinase
gene-IMY05_C4482000100 Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions
gene-IMY05_C4524000300 Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004550 nucleoside diphosphate kinase activity MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005740 mitochondrial envelope CC
GO:0005758 mitochondrial intermembrane space CC
GO:0005829 cytosol CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006165 nucleoside diphosphate phosphorylation BP
GO:0006213 pyrimidine nucleoside metabolic process BP
GO:0006220 pyrimidine nucleotide metabolic process BP
GO:0006221 pyrimidine nucleotide biosynthetic process BP
GO:0006241 CTP biosynthetic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006753 nucleoside phosphate metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006974 cellular response to DNA damage stimulus BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009116 nucleoside metabolic process BP
GO:0009117 nucleotide metabolic process BP
GO:0009119 ribonucleoside metabolic process BP
GO:0009132 nucleoside diphosphate metabolic process BP
GO:0009141 nucleoside triphosphate metabolic process BP
GO:0009142 nucleoside triphosphate biosynthetic process BP
GO:0009147 pyrimidine nucleoside triphosphate metabolic process BP
GO:0009148 pyrimidine nucleoside triphosphate biosynthetic process BP
GO:0009163 nucleoside biosynthetic process BP
GO:0009165 nucleotide biosynthetic process BP
GO:0009199 ribonucleoside triphosphate metabolic process BP
GO:0009201 ribonucleoside triphosphate biosynthetic process BP
GO:0009208 pyrimidine ribonucleoside triphosphate metabolic process BP
GO:0009209 pyrimidine ribonucleoside triphosphate biosynthetic process BP
GO:0009218 pyrimidine ribonucleotide metabolic process BP
GO:0009220 pyrimidine ribonucleotide biosynthetic process BP
GO:0009259 ribonucleotide metabolic process BP
GO:0009260 ribonucleotide biosynthetic process BP
GO:0009987 cellular process BP
GO:0016049 cell growth BP
GO:0016301 kinase activity MF
GO:0016310 phosphorylation BP
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016776 phosphotransferase activity, phosphate group as acceptor MF
GO:0018130 heterocycle biosynthetic process BP
GO:0019205 nucleobase-containing compound kinase activity MF
GO:0019438 aromatic compound biosynthetic process BP
GO:0019637 organophosphate metabolic process BP
GO:0019693 ribose phosphate metabolic process BP
GO:0031967 organelle envelope CC
GO:0031970 organelle envelope lumen CC
GO:0031974 membrane-enclosed lumen CC
GO:0031975 envelope CC
GO:0033554 cellular response to stress BP
GO:0034404 nucleobase-containing small molecule biosynthetic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034654 nucleobase-containing compound biosynthetic process BP
GO:0040007 growth BP
GO:0042455 ribonucleoside biosynthetic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046036 CTP metabolic process BP
GO:0046131 pyrimidine ribonucleoside metabolic process BP
GO:0046132 pyrimidine ribonucleoside biosynthetic process BP
GO:0046134 pyrimidine nucleoside biosynthetic process BP
GO:0046390 ribose phosphate biosynthetic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046939 nucleotide phosphorylation BP
GO:0050896 response to stimulus BP
GO:0051211 anisotropic cell growth BP
GO:0051716 cellular response to stimulus BP
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0061508 CDP phosphorylation BP
GO:0070013 intracellular organelle lumen CC
GO:0071704 organic substance metabolic process BP
GO:0072527 pyrimidine-containing compound metabolic process BP
GO:0072528 pyrimidine-containing compound biosynthetic process BP
GO:0090407 organophosphate biosynthetic process BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901293 nucleoside phosphate biosynthetic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901657 glycosyl compound metabolic process BP
GO:1901659 glycosyl compound biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00240 Pyrimidine metabolism -
map00230 Purine metabolism -