Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
gene-IMY05_C4768000400
View in Genome Browser
Position
JAEQKX010000955.1:12285-13796 (+)
1511bp
Gene Type
gene
Gene Description (Protein Product)
"Nuclear pore complex scaffold
Organism
Salix suchowensis
Also AS

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-IMY05_C4910000200 GLE1-like protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005198 structural molecule activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005635 nuclear envelope CC
GO:0005643 nuclear pore CC
GO:0005737 cytoplasm CC
GO:0006810 transport BP
GO:0006913 nucleocytoplasmic transport BP
GO:0006996 organelle organization BP
GO:0006997 nucleus organization BP
GO:0006999 nuclear pore organization BP
GO:0007346 regulation of mitotic cell cycle BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0010389 regulation of G2/M transition of mitotic cell cycle BP
GO:0010564 regulation of cell cycle process BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016043 cellular component organization BP
GO:0017056 structural constituent of nuclear pore MF
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031967 organelle envelope CC
GO:0031974 membrane-enclosed lumen CC
GO:0031975 envelope CC
GO:0031981 nuclear lumen CC
GO:0032386 regulation of intracellular transport BP
GO:0032879 regulation of localization BP
GO:0032991 protein-containing complex CC
GO:0034399 nuclear periphery CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043933 protein-containing complex organization BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044611 nuclear pore inner ring CC
GO:0046822 regulation of nucleocytoplasmic transport BP
GO:0046907 intracellular transport BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051049 regulation of transport BP
GO:0051169 nuclear transport BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0051726 regulation of cell cycle BP
GO:0060341 regulation of cellular localization BP
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0071840 cellular component organization or biogenesis BP
GO:1901987 regulation of cell cycle phase transition BP
GO:1901990 regulation of mitotic cell cycle phase transition BP
GO:1902749 regulation of cell cycle G2/M phase transition BP
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.