Basic Information
Gene ID
gene-IMY05_C5045000400
Position
JAEQKX010001139.1:29001-39248 (-)
10247bp
Gene Type
gene
Gene Description (Protein Product)
Transcription regulatory protein SNF2-like
Organism
Also AS AT3G06010

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-IMY05_C5327000200 Belongs to the actin family
gene-IMY05_C5045000400 Transcription regulatory protein SNF2-like
gene-IMY05_C5144000700 Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
GO Term Description GO Category
GO:0000182 rDNA binding MF
GO:0000228 nuclear chromosome CC
GO:0000785 chromatin CC
GO:0000790 chromatin CC
GO:0001085 RNA polymerase II-specific DNA-binding transcription factor binding MF
GO:0001102 RNA polymerase II-specific DNA-binding transcription factor binding MF
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003682 chromatin binding MF
GO:0003690 double-stranded DNA binding MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005694 chromosome CC
GO:0005975 carbohydrate metabolic process BP
GO:0005984 disaccharide metabolic process BP
GO:0005985 sucrose metabolic process BP
GO:0005987 sucrose catabolic process BP
GO:0006066 alcohol metabolic process BP
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006259 DNA metabolic process BP
GO:0006260 DNA replication BP
GO:0006261 DNA-templated DNA replication BP
GO:0006281 DNA repair BP
GO:0006302 double-strand break repair BP
GO:0006310 DNA recombination BP
GO:0006325 chromatin organization BP
GO:0006338 chromatin remodeling BP
GO:0006355 regulation of DNA-templated transcription BP
GO:0006357 regulation of transcription by RNA polymerase II BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006974 cellular response to DNA damage stimulus BP
GO:0006996 organelle organization BP
GO:0007154 cell communication BP
GO:0008094 ATP-dependent activity, acting on DNA MF
GO:0008134 transcription factor binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009267 cellular response to starvation BP
GO:0009311 oligosaccharide metabolic process BP
GO:0009313 oligosaccharide catabolic process BP
GO:0009605 response to external stimulus BP
GO:0009889 regulation of biosynthetic process BP
GO:0009891 positive regulation of biosynthetic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0010453 regulation of cell fate commitment BP
GO:0010455 positive regulation of cell fate commitment BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010557 positive regulation of macromolecule biosynthetic process BP
GO:0010570 regulation of filamentous growth BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010628 positive regulation of gene expression BP
GO:0010810 regulation of cell-substrate adhesion BP
GO:0010811 positive regulation of cell-substrate adhesion BP
GO:0016043 cellular component organization BP
GO:0016052 carbohydrate catabolic process BP
GO:0016462 pyrophosphatase activity MF
GO:0016514 SWI/SNF complex CC
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016887 ATP hydrolysis activity MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0030155 regulation of cell adhesion BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031328 positive regulation of cellular biosynthetic process BP
GO:0031490 chromatin DNA binding MF
GO:0031491 nucleosome binding MF
GO:0031492 nucleosomal DNA binding MF
GO:0031494 regulation of mating type switching BP
GO:0031496 positive regulation of mating type switching BP
GO:0031667 response to nutrient levels BP
GO:0031668 cellular response to extracellular stimulus BP
GO:0031669 cellular response to nutrient levels BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032991 protein-containing complex CC
GO:0033554 cellular response to stress BP
GO:0033613 DNA-binding transcription factor binding MF
GO:0034198 cellular response to amino acid starvation BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0034728 nucleosome organization BP
GO:0036003 positive regulation of transcription from RNA polymerase II promoter in response to stress BP
GO:0040008 regulation of growth BP
GO:0042148 strand invasion BP
GO:0042393 histone binding MF
GO:0042594 response to starvation BP
GO:0042623 ATP hydrolysis activity MF
GO:0042766 obsolete nucleosome mobilization BP
GO:0043044 chromatin remodeling BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043565 sequence-specific DNA binding MF
GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress BP
GO:0043620 regulation of DNA-templated transcription in response to stress BP
GO:0043900 obsolete regulation of multi-organism process BP
GO:0043902 obsolete positive regulation of multi-organism process BP
GO:0043933 protein-containing complex organization BP
GO:0044107 cellular alcohol metabolic process BP
GO:0044109 cellular alcohol catabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044262 cellular carbohydrate metabolic process BP
GO:0044275 cellular carbohydrate catabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044282 small molecule catabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044454 obsolete nuclear chromosome part CC
GO:0044464 obsolete cell part CC
GO:0044877 protein-containing complex binding MF
GO:0045595 regulation of cell differentiation BP
GO:0045597 positive regulation of cell differentiation BP
GO:0045785 positive regulation of cell adhesion BP
GO:0045893 positive regulation of DNA-templated transcription BP
GO:0045927 positive regulation of growth BP
GO:0045935 positive regulation of nucleobase-containing compound metabolic process BP
GO:0045944 positive regulation of transcription by RNA polymerase II BP
GO:0046164 alcohol catabolic process BP
GO:0046352 disaccharide catabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051094 positive regulation of developmental process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051254 positive regulation of RNA metabolic process BP
GO:0051276 chromosome organization BP
GO:0051716 cellular response to stimulus BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061412 positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation BP
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0070577 lysine-acetylated histone binding MF
GO:0070603 SWI/SNF superfamily-type complex CC
GO:0070784 regulation of growth of unicellular organism as a thread of attached cells BP
GO:0070786 positive regulation of growth of unicellular organism as a thread of attached cells BP
GO:0071496 cellular response to external stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0071824 protein-DNA complex subunit organization BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0090033 positive regulation of filamentous growth BP
GO:0090304 nucleic acid metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0140030 modification-dependent protein binding MF
GO:0140033 acetylation-dependent protein binding MF
GO:1900187 regulation of cell adhesion involved in single-species biofilm formation BP
GO:1900189 positive regulation of cell adhesion involved in single-species biofilm formation BP
GO:1900190 regulation of single-species biofilm formation BP
GO:1900192 positive regulation of single-species biofilm formation BP
GO:1900428 regulation of filamentous growth of a population of unicellular organisms BP
GO:1900430 positive regulation of filamentous growth of a population of unicellular organisms BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901363 heterocyclic compound binding MF
GO:1901575 organic substance catabolic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901615 organic hydroxy compound metabolic process BP
GO:1901616 organic hydroxy compound catabolic process BP
GO:1902494 catalytic complex CC
GO:1902680 positive regulation of RNA biosynthetic process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1903508 positive regulation of nucleic acid-templated transcription BP
GO:1904949 ATPase complex CC
GO:1990837 sequence-specific double-stranded DNA binding MF
GO:1990928 response to amino acid starvation BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000217 regulation of invasive growth in response to glucose limitation BP
GO:2000219 positive regulation of invasive growth in response to glucose limitation BP
GO:2000241 regulation of reproductive process BP
GO:2000243 positive regulation of reproductive process BP
GO:2001141 regulation of RNA biosynthetic process BP