Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
SESE_116960.g
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Position
Scaffold_327235:124902-149737 (-)
24835bp
Gene Type
gene
Gene Description (Protein Product)
Splicing factor 3B subunit
Organism
Sequoia sempervirens
Also AS AT2G18510

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
SESE_123116.g Small nuclear ribonucleoprotein
SESE_131970.g Splicing factor 3B subunit 6-like protein
SESE_137307.g Splicing factor 3B subunit 6-like protein
Regulatory gene
SESE_003818.g LOB domain-containing protein
SESE_007476.g dof zinc finger protein
SESE_007952.g Zinc-finger homeodomain protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.