Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
SESE_137307.g
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Position
Scaffold_142640:12871750-12872124 (+)
374bp
Gene Type
gene
Gene Description (Protein Product)
Splicing factor 3B subunit 6-like protein
Organism
Sequoia sempervirens
Also AS AT5G12190

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
SESE_141804.g Splicing factor 3B subunit
SESE_142222.g splicing factor 3A subunit 1
SESE_139503.g Splicing factor 3B subunit
Regulatory gene
SESE_002563.g reveille
SESE_003268.g Transcription factor
SESE_003364.g isoform X1

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.