Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC107430246
View in Genome Browser
Position
NC_063297.1:7495619-7498893 (+)
3274bp
Gene Type
gene
Gene Description (Protein Product)
peptidyl-tRNA hydrolase ICT1
Organism
Ziziphus jujuba
Also AS AT1G62850

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC107434442 THO complex subunit
gene-LOC107432101 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
gene-LOC107430404 Protein of unknown function (DUF1223)

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000313 organellar ribosome CC
GO:0000315 organellar large ribosomal subunit CC
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003747 translation release factor activity MF
GO:0003824 catalytic activity MF
GO:0004045 aminoacyl-tRNA hydrolase activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005759 mitochondrial matrix CC
GO:0005761 mitochondrial ribosome CC
GO:0005762 mitochondrial large ribosomal subunit CC
GO:0005840 ribosome CC
GO:0006412 translation BP
GO:0006414 translational elongation BP
GO:0006415 translational termination BP
GO:0006417 regulation of translation BP
GO:0006518 peptide metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008079 translation termination factor activity MF
GO:0008135 translation factor activity, RNA binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009889 regulation of biosynthetic process BP
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010608 post-transcriptional regulation of gene expression BP
GO:0015934 large ribosomal subunit CC
GO:0016043 cellular component organization BP
GO:0016150 translation release factor activity, codon nonspecific MF
GO:0016787 hydrolase activity MF
GO:0016788 hydrolase activity, acting on ester bonds MF
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0022411 cellular component disassembly BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031974 membrane-enclosed lumen CC
GO:0032268 regulation of protein metabolic process BP
GO:0032543 mitochondrial translation BP
GO:0032984 protein-containing complex disassembly BP
GO:0032991 protein-containing complex CC
GO:0034248 regulation of amide metabolic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0043043 peptide biosynthetic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043603 amide metabolic process BP
GO:0043604 amide biosynthetic process BP
GO:0043624 protein-containing complex disassembly BP
GO:0043933 protein-containing complex organization BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044391 ribosomal subunit CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051246 regulation of protein metabolic process BP
GO:0052689 carboxylic ester hydrolase activity MF
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0070126 mitochondrial translational termination BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072344 rescue of stalled ribosome BP
GO:0080090 regulation of primary metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0098798 mitochondrial protein-containing complex CC
GO:0140053 mitochondrial gene expression BP
GO:0140098 catalytic activity, acting on RNA MF
GO:0140101 catalytic activity, acting on a tRNA MF
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1990904 ribonucleoprotein complex CC
GO:2000112 regulation of cellular macromolecule biosynthetic process BP