Basic Information
Gene ID
gene-LOC125422308
Position
NC_063291.1:5087024-5090299 (-)
3275bp
Gene Type
gene
Gene Description (Protein Product)
Xanthoxin
Organism
Also AS AT1G52340

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125422507 Phosphoribosylformylglycinamidine cyclo-ligase; chloroplastic mitochondrial-like
gene-LOC125423669 ABC transporter
Regulatory gene
gene-LOC107405089 Protein BASIC PENTACYSTEINE2-like
gene-LOC107420393 Protein BASIC PENTACYSTEINE6-like
gene-LOC107426555 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004022 alcohol dehydrogenase (NAD+) activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006066 alcohol metabolic process BP
GO:0006082 organic acid metabolic process BP
GO:0006520 amino acid metabolic process BP
GO:0006560 proline metabolic process BP
GO:0006561 proline biosynthetic process BP
GO:0006629 lipid metabolic process BP
GO:0006714 sesquiterpenoid metabolic process BP
GO:0006720 isoprenoid metabolic process BP
GO:0006721 terpenoid metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008299 isoprenoid biosynthetic process BP
GO:0008610 lipid biosynthetic process BP
GO:0008652 amino acid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009064 glutamine family amino acid metabolic process BP
GO:0009084 glutamine family amino acid biosynthetic process BP
GO:0009266 response to temperature stimulus BP
GO:0009408 response to heat BP
GO:0009414 response to water deprivation BP
GO:0009415 response to water BP
GO:0009628 response to abiotic stimulus BP
GO:0009687 abscisic acid metabolic process BP
GO:0009688 abscisic acid biosynthetic process BP
GO:0009743 response to carbohydrate BP
GO:0009746 response to hexose BP
GO:0009750 response to fructose BP
GO:0009756 carbohydrate mediated signaling BP
GO:0009889 regulation of biosynthetic process BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0010115 regulation of abscisic acid biosynthetic process BP
GO:0010182 sugar mediated signaling pathway BP
GO:0010301 xanthoxin dehydrogenase activity MF
GO:0010565 regulation of cellular ketone metabolic process BP
GO:0016053 organic acid biosynthetic process BP
GO:0016106 sesquiterpenoid biosynthetic process BP
GO:0016114 terpenoid biosynthetic process BP
GO:0016491 oxidoreductase activity MF
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors MF
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor MF
GO:0018130 heterocycle biosynthetic process BP
GO:0019216 regulation of lipid metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019747 regulation of isoprenoid metabolic process BP
GO:0019752 carboxylic acid metabolic process BP
GO:0023052 signaling BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032787 monocarboxylic acid metabolic process BP
GO:0034284 response to monosaccharide BP
GO:0042221 response to chemical BP
GO:0043288 apocarotenoid metabolic process BP
GO:0043289 apocarotenoid biosynthetic process BP
GO:0043436 oxoacid metabolic process BP
GO:0043455 regulation of secondary metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046165 alcohol biosynthetic process BP
GO:0046394 carboxylic acid biosynthetic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046890 regulation of lipid biosynthetic process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0062012 regulation of small molecule metabolic process BP
GO:0065007 biological regulation BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071310 cellular response to organic substance BP
GO:0071322 cellular response to carbohydrate stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0072330 monocarboxylic acid biosynthetic process BP
GO:0080090 regulation of primary metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901605 alpha-amino acid metabolic process BP
GO:1901607 alpha-amino acid biosynthetic process BP
GO:1901615 organic hydroxy compound metabolic process BP
GO:1901617 organic hydroxy compound biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
GO:1902644 tertiary alcohol metabolic process BP
GO:1902645 tertiary alcohol biosynthetic process BP
GO:1902930 regulation of alcohol biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00906 Carotenoid biosynthesis -