PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC125423288 View in Genome Browser
Position	NC_063293.1:30203729-30206486 (-) 2757bp
Gene Type	gene
Gene Description (Protein Product)	Histidine kinase-like ATPases
Organism	Ziziphus jujuba
Also AS	AT1G67840

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC125423826 ATP synthase subunit beta

gene-LOC125423288 Histidine kinase-like ATPases

gene-LOC125424023 Photosystem II (PSII) is a light-driven water plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O; generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons; and an electron transfer chain that converts photonic excitation into a charge separation. The D1 D2 (PsbA PsbA) reaction center heterodimer binds P680; the primary electron donor of PSII as well as several subsequent electron acceptors

Regulatory gene

gene-LOC107404041 NAC domain-containing protein

gene-LOC107404081 NAC domain-containing protein

gene-LOC107404402 transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004672	protein kinase activity	MF
GO:0004673	protein histidine kinase activity	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006464	protein modification process	BP
GO:0006468	protein phosphorylation	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009507	chloroplast	CC
GO:0009532	plastid stroma	CC
GO:0009536	plastid	CC
GO:0009570	chloroplast stroma	CC
GO:0009593	detection of chemical stimulus	BP
GO:0009987	cellular process	BP
GO:0010109	regulation of photosynthesis	BP
GO:0010468	regulation of gene expression	BP
GO:0016301	kinase activity	MF
GO:0016310	phosphorylation	BP
GO:0016740	transferase activity	MF
GO:0016772	transferase activity, transferring phosphorus-containing groups	MF
GO:0016773	phosphotransferase activity, alcohol group as acceptor	MF
GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	MF
GO:0018106	peptidyl-histidine phosphorylation	BP
GO:0018193	peptidyl-amino acid modification	BP
GO:0018202	peptidyl-histidine modification	BP
GO:0019222	regulation of metabolic process	BP
GO:0019538	protein metabolic process	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0036211	protein modification process	BP
GO:0042221	response to chemical	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043412	macromolecule modification	BP
GO:0043621	protein self-association	MF
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0046777	protein autophosphorylation	BP
GO:0048037	obsolete cofactor binding	MF
GO:0048038	quinone binding	MF
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051606	detection of stimulus	BP
GO:0051775	response to redox state	BP
GO:0051776	detection of redox state	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0071704	organic substance metabolic process	BP
GO:0080005	photosystem stoichiometry adjustment	BP
GO:0140096	catalytic activity, acting on a protein	MF
GO:1901564	organonitrogen compound metabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00760	Nicotinate and nicotinamide metabolism	-