About Variants

iDog houses the variation information of dog/wolf genomes. It was designed and constructed as a SNPs detector and visualization tool to provide the research community a useful resource for the study of dog's population, evolution, phenotype and life habit. In the current version, DogSD contains 71 millions non-redundant SNPs called from 722 individual samples and 6 millions ancient SNPs called from 27 individual samples.

Current Dataset

Data type #Individuals #Unique SNP #SNP affected AA changed BioProject Reference Version
DNA 1,929 27,878,361 - PRJNA587469 UU_Cfam_GSD_1.0 (canFam4)

Download

The BAM,Fastq and VCF files can be accessed via FTP

Tutorials

● How to use variants data

Data provider

The VCF,Fastq,BAM data provided by Yaping Zhang's Lab in Kunming Institute of Zoology (KIZ), Chinese Academic of Sciences (CAS).