ccmFN2 - Plant Editosome Database - BIG Data Center

Summary

Gene: ccmFN2
Function: Cytochrome c biogenesis protein
Species: 6
Editing Factors:12 (DEK36, DYW2, MEF11, MEF37, MORF1, MORF3, MORF8, ORRM4, ORRM5, OTP71, OTP90, PGN)
Editing Types:
C-to-U (40)
Editing Events: 44 (C-to-U: 40   NA: 4)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Brassica carinataMitochondrion1
NA: 1
177136-177771CDS+NANA=>NANA=>NA
Brassica junceaMitochondrion1
NA: 1
45794-46429CDS+NANA=>NANA=>NA
Brassica napusMitochondrion20
C-to-U: 20
31789
31817
31900
31932
31950
31983
32001
32044
32068
32115
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGG=>UGG
UCG=>UUG
CCA=>CUA
CCA=>CUA
CGG=>UGG
CGG=>UGG
CGG=>UGG
CCC=>UCC
CGU=>UGU
CCA=>CUA
AAC=>AAU
CGG=>UGG
CGU=>UGU
UCG=>UUG
CCC=>UCC
UCG=>UUG
CCA=>CUA
AAC=>AAU
CGG=>UGG
UCG=>UUG
R=>W
S=>L
P=>L
P=>L
R=>W
R=>W
R=>W
P=>S
R=>C
P=>L
N=>N
R=>W
R=>C
S=>L
P=>S
S=>L
P=>L
N=>N
R=>W
S=>L
Brassica oleracea var. oleraceaMitochondrion1
NA: 1
108533-109168CDS+NANA=>NANA=>NA
Brassica rapa subsp. oleiferaMitochondrion1
NA: 1
45790-46425CDS+NANA=>NANA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)