Plant Editosome Database
a curated database of RNA editosome in plants

ORRM4 - Plant Editosome Database - BIG Data Center
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Summary

Editing Factor: ORRM4
Synonym: GLYCINE-RICH RNA-BINDING PROTEIN 5; GR-RBP5; ORGANELLE RNA RECOGNITION MOTIF-CONTAINING4; RBGA2; RNA-BINDING GLYCINE-RICH PROTEIN A2
Description: Encoding a glycine-rich RNA binding protein; The mRNA is cell-to-cell mobile
Protein Family: ORRM
Subclass: NA
Construct Structure: RRM-GR, NA
Gene ID & Species: AT1G74230 (Arabidopsis thaliana)
NA (Solanum lycopersicum)
Edited Gene(s): ccmFn1    cox3    mttB    nad9    orf114    orf240A    rpl16    rpl5    rps12    pseudo-rps14    rps4    rps7    atp4    atp8    ccmB    ccmC    ccmFc    ccmFn2    cob    cox2    matR    nad2    nad3    nad4    nad4L    nad5    nad6    nad7    rpl2    rps3    sdh4    atpA    rpoB    NA    rpoA    ndhD    atp1    atp6    atp9    ccmFn    cox1    rps10    rps13    sdh3
Editing Type(s): C-to-U (2503)
Publication(s): [1] Molecular and functional diversity of organelle RNA editing mediated by RNA recognition motif-containing protein ORRM4 in tomato., The New phytologist, 2020. [PMID=32473605]
[2] The RNA Editing Factor SlORRM4 Is Required for Normal Fruit Ripening in Tomato., Plant physiology, 2017. [PMID=29061908]
[3] RNA Recognition Motif-Containing Protein ORRM4 Broadly Affects Mitochondrial RNA Editing and Impacts Plant Development and Flowering., Plant physiology, 2016. [PMID=26578708]

Editing Details

Species Gene ID Organelle Edited Gene Position Region Editing Type Codon Amino Acid Molecular Effect Experiment Details
Arabidopsis thaliana AT1G74230 Mitochondrion atp4 138 CDS C-to-U AUC=>AUU I=>I Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.00%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.60%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)75.70%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion atp4 250 CDS C-to-U CCG/CCG=>UCG/UUG P=>S/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.80%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.40%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.30%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion atp4 416 CDS C-to-U ACU=>AUU T=>I Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.20%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.30%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion atp4 525 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)5.90%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.90%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.20%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)16.10%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)16.80%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)15.20%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion atp8 389 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)17.00%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)15.50%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)21.00%LowDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)28.60%LowNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)29.20%LowNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)27.30%LowNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 128 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)49.50%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)50.80%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)44.70%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 137 CDS C-to-U UCC/UCC=>UUC/UUU S=>F/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)53.70%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)54.90%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)49.50%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 138 CDS C-to-U UCC/UCC=>UCU/UUU S=>S/F Synonymous/Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.50%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.50%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.50%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)9.30%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)9.70%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)9.10%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 148 CDS C-to-U CCG/CCG=>UCG/UUG P=>S/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)56.70%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)58.70%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)49.50%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.40%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 149 CDS C-to-U CCG/CCG=>CUG/UUG P=>L/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.30%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)59.00%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)50.90%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 154 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)56.10%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.40%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)51.60%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 159 CDS C-to-U AUC=>AUU I=>I Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)54.10%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)54.60%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)52.40%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 16 CDS C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.60%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.20%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.50%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 160 CDS C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)55.70%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)56.60%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)52.10%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.00%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 164 CDS C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)45.50%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)45.10%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)47.00%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 172 CDS C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.60%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)63.00%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)56.50%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.00%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 179 CDS C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.20%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.70%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)55.30%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.50%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 181 CDS C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)62.90%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)64.00%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)58.70%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 193 CDS C-to-U CCU/CCU=>UCU/UUU P=>S/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)54.30%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)56.90%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)45.30%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 194 CDS C-to-U CCU/CCU=>CUU/UUU P=>L/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)54.70%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.20%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)46.00%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 28 CDS C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)64.90%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)64.00%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.00%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.00%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 286 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.50%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.30%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.50%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 304 CDS C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.50%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.60%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 324 CDS C-to-U CCC=>CCU P=>P Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)8.80%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)8.50%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)9.60%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)11.50%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)10.20%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)12.00%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 338 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.00%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.40%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)64.00%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 367 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)53.20%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)53.90%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)50.70%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.40%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 379 CDS C-to-U CCA/CCA=>UCA/UUA P=>S/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)49.60%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)48.90%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)51.90%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 380 CDS C-to-U CCA/CCA=>CUA/UUA P=>L/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)66.90%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)63.00%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 391 CDS C-to-U CUG=>UUG L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)2.30%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)2.10%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.10%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.80%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.90%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.70%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 424 CDS C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.80%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.00%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.00%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 428 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.00%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.20%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.00%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.00%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 467 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)54.20%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)52.40%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.70%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 475 CDS C-to-U CCA/CCA=>UCA/UUA P=>S/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.50%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.40%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.70%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 476 CDS C-to-U CCA/CCA=>CUA/UUA P=>L/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.30%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.50%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 485 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.50%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.90%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.50%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 501 CDS C-to-U CCC=>CCU P=>P Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)8.40%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.90%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)10.00%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)13.90%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)13.80%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)13.90%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 512 CDS C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.00%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.80%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.50%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 514 CDS C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.60%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.40%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)75.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 551 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)75.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.00%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 554 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.40%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.50%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 566 CDS C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.50%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 569 CDS C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.30%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)75.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.90%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.40%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 576 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)42.20%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)38.50%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)54.50%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)51.90%MediumNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)55.40%MediumNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)50.00%MediumNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 596 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.80%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)62.50%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.00%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 71 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.10%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.00%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.20%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 75 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)11.40%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)10.70%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)14.20%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)16.90%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)17.80%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)16.40%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmB 80 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)56.50%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.40%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)53.40%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.40%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.60%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 176 CDS C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.60%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.40%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)2.10%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.40%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.50%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.20%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 184 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.40%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)56.70%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 252 CDS C-to-U CCC=>CCU P=>P Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)22.90%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)21.90%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)25.20%LowDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)39.40%LowNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)34.90%LowNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)45.00%MediumNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 270 CDS C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)9.70%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)10.30%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)8.40%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)16.50%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)14.50%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)18.80%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 331 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 381 CDS C-to-U ACC=>ACU T=>T Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)15.00%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)13.00%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)19.60%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)31.10%LowNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)30.10%LowNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)32.20%LowNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 400 CDS C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.00%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.50%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.50%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 421 CDS C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.30%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)55.90%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.90%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 436 CDS C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.60%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 446 CDS C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)75.50%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.40%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 458 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.20%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.60%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 463 CDS C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)66.50%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.60%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 467 CDS C-to-U GCU=>GUU A=>V Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.90%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.50%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 473 CDS C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.40%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.50%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.00%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 497 CDS C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 521 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.10%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.20%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 548 CDS C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.50%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.40%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 568 CDS C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.00%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.40%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.50%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 575 CDS C-to-U CCC=>CUC P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.40%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.80%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 614 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.20%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.50%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 618 CDS C-to-U ACC=>ACU T=>T Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.40%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.50%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.00%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 619 CDS C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.50%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.20%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.00%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmC 673 CDS C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)45.70%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)43.90%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)50.60%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.00%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFc 123 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.80%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.00%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFc 160 CDS C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.50%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.60%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.60%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFc 175 CDS C-to-U CUA=>UUA L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.00%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.80%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn1 104 CDS C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.80%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.80%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn1 143 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.40%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.00%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.50%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn1 157 CDS C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.70%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.80%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.30%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.00%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn1 262 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.70%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.60%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.10%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.90%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.70%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.40%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn1 269 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.50%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn1 289 CDS C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.80%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)59.00%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.80%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.50%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.80%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.60%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn1 371 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)8.60%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.40%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)10.70%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)17.40%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)11.50%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)21.40%LowNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn1 378 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.80%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.00%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.30%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.30%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn1 709 CDS C-to-U CCU/CCU=>UCU/UUU P=>S/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)32.00%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)37.70%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)20.70%LowDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn1 710 CDS C-to-U CCU/CCU=>CUU/UUU P=>L/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.50%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.00%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.40%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.00%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.30%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn1 779 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.30%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.30%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.30%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.10%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn1 791 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn1 806 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.20%HighNone26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.10%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.60%HighDecreased26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn1 955 CDS C-to-U CGC=>UGC R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.30%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn2 176 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.40%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.80%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.00%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn2 208 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)58.40%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)52.80%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn2 226 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.40%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.50%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.20%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn2 259 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.40%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn2 277 CDS C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.80%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.80%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.40%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn2 320 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)45.00%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)47.50%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)41.10%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.00%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn2 344 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.40%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.40%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.90%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn2 356 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.70%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn2 391 CDS C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.90%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.60%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.00%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn2 65 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.30%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.40%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion ccmFn2 93 CDS C-to-U AAC=>AAU N=>N Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)23.90%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)24.60%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)22.80%LowDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)35.20%LowNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)34.50%LowNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)35.80%LowNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion cob 114 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.40%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.40%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.30%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)6.90%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)6.50%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.20%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion cob 118 CDS C-to-U CCG=>UCG P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.40%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.00%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.40%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.00%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion cob 325 CDS C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.90%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.20%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.90%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion cob 381 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.30%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.60%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.80%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)14.50%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)16.00%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)13.00%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion cob 497 CDS C-to-U ACC=>AUC T=>I Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.60%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.40%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)2.10%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.90%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.40%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.40%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion cob 924 CDS C-to-U CUC=>CUU L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)29.50%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)30.40%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)28.10%LowDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)34.80%LowNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)33.20%LowNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)36.30%LowNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion cox2 27 CDS C-to-U CUC=>CUU L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.00%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.50%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.20%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion cox2 379 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.40%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.90%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.50%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion cox3 112 CDS C-to-U CCA=>UCA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.00%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.00%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.60%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.50%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion cox3 245 CDS C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.30%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion cox3 257 CDS C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.60%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)63.20%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion cox3 311 CDS C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)66.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.40%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)64.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion cox3 314 CDS C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.00%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion cox3 413 CDS C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.40%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.70%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion cox3 567 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.80%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)2.00%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.70%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.10%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.00%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.30%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion cox3 NA 3'UTR C-to-U NA=>NA NA=>NA NA
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.40%MediumNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)20.70%LowDecreased26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)2.40%PoorDecreased26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)56.60%MediumDecreased26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)64.70%HighDecreased26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.30%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)20.80%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)2.10%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)54.90%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.60%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)20.50%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)2.80%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)59.10%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)63.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.80%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)35.40%LowDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)42.70%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)63.60%HighNone26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.90%PoorNone26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.30%HighNone26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.80%HighNone26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.80%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)8.20%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion matR 1408 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.30%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.70%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)6.30%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)16.10%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)15.70%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)16.60%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion matR 1593 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)43.60%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)44.00%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)42.80%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)59.30%MediumNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.70%MediumNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion matR 1731 CDS C-to-U UCC/UCC=>UCU/UUU S=>S/F Synonymous/Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)53.70%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)52.60%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)56.00%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion matR 1751 CDS C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.80%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)66.00%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.50%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.00%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion matR 1807 CDS C-to-U CAC=>UAC H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.60%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.60%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)75.50%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion matR 374 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.10%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)66.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.70%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion matR 461 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.60%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.20%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 108 CDS C-to-U AUC=>AUU I=>I Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.20%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.90%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)6.10%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)11.70%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)10.40%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)13.70%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 144 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)18.00%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)19.10%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)16.00%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)42.00%MediumNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)39.50%LowNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)45.60%MediumNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 145 CDS C-to-U CCG=>UCG P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.30%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.00%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.70%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 161 CDS C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.30%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.20%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 164 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.40%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 173 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.30%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)75.60%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.00%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.40%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 175 CDS C-to-U CCC/CCC=>UCC/UCU P=>S/S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.30%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.30%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.40%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)6.10%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)6.50%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)5.70%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 361 CDS C-to-U CUC=>UUC L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.00%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 364 CDS C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.80%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.20%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.30%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 377 CDS C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)33.60%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)34.00%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)33.00%LowDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 379 CDS C-to-U CGC=>UGC R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.00%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.20%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.30%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 387 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)27.50%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)26.50%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)29.40%LowDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)35.80%LowNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)38.80%LowNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)31.70%LowNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 406 CDS C-to-U CCU/CCU=>UCU/UUU P=>S/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)55.80%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)55.30%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)56.90%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.00%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 407 CDS C-to-U CCU/CCU=>CUU/UUU P=>L/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)66.80%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.80%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 409 CDS C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)63.20%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.90%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.50%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.60%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 412 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)63.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.90%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 440 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)59.90%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)59.90%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.50%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 474 CDS C-to-U CUC=>CUU L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)49.50%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)47.50%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)53.10%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)64.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)66.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 505 CDS C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.60%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 530 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)66.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)63.80%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.40%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 538 CDS C-to-U CCA=>UCA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)75.80%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)75.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.80%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 552 CDS C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)28.40%LowNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)12.70%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)13.30%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)11.80%PoorDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)18.00%PoorDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)21.70%LowDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)33.60%LowNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)35.20%LowNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)31.60%LowNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 581 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)62.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)58.40%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 586 CDS C-to-U CCA/CCA=>UCA/UUA P=>S/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)37.20%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)36.40%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)38.40%LowDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.40%MediumNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.20%MediumNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.70%MediumNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 587 CDS C-to-U CCA/CCA=>CUA/UUA P=>L/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.30%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.20%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.90%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 59 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.50%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.60%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.50%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 643 CDS C-to-U CCG=>UCG P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.50%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 649 CDS C-to-U CUC=>UUC L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)55.80%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)56.10%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)55.40%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 65 CDS C-to-U ACG=>AUG T=>M Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.90%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.30%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.30%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)6.10%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)5.40%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.10%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 665 CDS C-to-U UCC/UCC=>UUC/UUU S=>F/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.10%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.20%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)62.70%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 666 CDS C-to-U UCC/UCC=>UCU/UUU S=>S/F Synonymous/Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)41.90%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)41.10%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)43.30%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)66.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 693 CDS C-to-U AUC=>AUU I=>I Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)59.90%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)59.50%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 700 CDS C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.70%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 705 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)36.50%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)37.10%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)35.40%LowDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)63.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)62.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)64.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 746 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)56.30%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.10%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)54.80%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.40%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion mttB 97 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)43.70%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)47.20%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)37.80%LowDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)75.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.00%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad2 558 CDS C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)27.70%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)28.80%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)26.10%LowDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)37.50%LowNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)41.10%MediumNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)33.30%LowNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad3 149 CDS C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.40%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)58.60%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad3 211 CDS C-to-U CCU/CCU=>UCU/UUU P=>S/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.00%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad3 212 CDS C-to-U CCU/CCU=>CUU/UUU P=>L/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.00%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.30%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.60%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad3 250 CDS C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad3 254 CDS C-to-U CCC=>CUC P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.40%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.20%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.00%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad3 26 CDS C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.00%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.50%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.60%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad3 347 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.70%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad3 352 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.90%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.30%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad3 64 CDS C-to-U CUA=>UUA L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.10%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)64.60%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad3 8 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.90%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.50%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.80%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad3 83 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.30%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.00%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)66.70%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.00%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad4 1101 CDS C-to-U UAC=>UAU Y=>Y Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.90%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.80%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad4 1194 CDS C-to-U AUC=>AUU I=>I Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)11.40%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)10.50%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)13.50%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)20.60%LowNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)20.50%LowNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)20.70%LowNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad4 1417 CDS C-to-U CAC=>UAC H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.50%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad4 84 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)33.30%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)33.60%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)32.40%LowDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)40.10%MediumNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)39.70%LowNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)40.50%MediumNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad4L 100 CDS C-to-U CCA=>UCA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)75.00%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad4L 110 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.90%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.50%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)62.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.50%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad4L 131 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.50%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.00%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.90%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad4L 158 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.60%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.60%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad4L 188 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.70%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad4L 197 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.10%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.50%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.00%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad4L 41 CDS C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.70%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad4L 55 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.60%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad4L 86 CDS C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.90%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.00%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.30%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)99.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad4L 95 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.80%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.40%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad5 1731 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)13.40%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)13.80%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)12.80%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)19.20%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)18.40%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)19.70%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad5 1929 CDS C-to-U GAC=>GAU D=>D Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)8.90%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.20%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)11.40%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)12.50%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)9.40%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)14.60%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad5 NA Intron C-to-U NA=>NA NA=>NA NA
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.10%HighDecreased26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)59.30%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)59.40%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)58.90%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.30%HighNone26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)66.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad6 NA 5'UTR C-to-U NA=>NA NA=>NA NA
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.40%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)75.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.90%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.00%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad7 24 CDS C-to-U AUC=>AUU I=>I Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.50%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad7 38 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.60%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.90%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad7 NA Intron C-to-U NA=>NA NA=>NA NA
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.10%HighDecreased26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.30%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.30%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.30%HighNone26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.40%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad9 167 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.00%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad9 190 CDS C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.50%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.50%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.00%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad9 298 CDS C-to-U CCG=>UCG P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)75.60%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.60%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad9 328 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.60%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.00%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad9 398 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.90%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.20%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.30%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad9 439 CDS C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.40%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad9 517 CDS C-to-U CAA=>UAA Q=>Stop codon Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.90%PoorNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.40%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.30%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.70%PoorDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.30%PoorDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.40%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)6.60%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)6.90%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)6.00%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion nad9 92 CDS C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)66.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.20%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion orf114 309 CDS C-to-U GUC=>GUU V=>V Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)62.20%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)38.90%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)44.20%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)31.50%LowDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)27.30%LowDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)42.50%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion orf114 327 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.00%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)48.80%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)59.00%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)34.60%LowDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)24.10%LowDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)41.90%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion orf240A 199 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)42.60%MediumNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)37.40%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)42.80%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)28.70%LowDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)32.90%LowDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)28.40%LowDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)49.20%MediumNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.30%MediumNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)40.90%MediumNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion pseudo-rps14 194 CDS C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.00%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.80%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)64.20%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.20%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)50.40%MediumDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.00%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.00%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion pseudo-rps14 99 CDS C-to-U CCC=>CCU P=>P Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)16.70%PoorNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.60%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.70%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.30%PoorDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)5.90%PoorDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)11.90%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)19.60%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)18.70%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)20.60%LowNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl16 426 CDS C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.50%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.00%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.00%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)10.10%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)10.00%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)10.30%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl16 43 CDS C-to-U CUA=>UUA L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.40%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.10%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.80%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)16.40%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)16.40%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)16.50%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl16 506 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.50%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.60%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.30%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.00%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl16 82 CDS C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)0.50%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)0.40%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)0.60%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)2.20%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)2.40%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.90%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl16 NA 3'UTR C-to-U NA=>NA NA=>NA NA
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.00%HighNone26578708
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)37.30%LowNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.40%PoorDecreased26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.90%PoorDecreased26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)62.30%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.70%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.70%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)58.70%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)5.30%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)2.10%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.60%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)66.20%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)29.60%LowDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)64.70%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)24.10%LowDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)8.10%PoorNone26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.60%PoorNone26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.40%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)6.50%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)8.80%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)8.70%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl2 212 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)34.80%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)38.30%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)23.30%LowDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl2 258 CDS C-to-U AUC=>AUU I=>I Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)2.00%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.80%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)2.60%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.10%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.30%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.00%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl5 121 CDS C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.50%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.50%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.40%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.40%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.50%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.30%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl5 169 CDS C-to-U CGC=>UGC R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.00%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)44.30%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)40.30%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)51.80%MediumDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)53.00%MediumDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.40%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl5 270 CDS C-to-U GAC=>GAU D=>D Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)5.10%PoorNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.00%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.10%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)0.90%PoorDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.80%PoorDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)2.00%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)5.80%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)5.80%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)5.90%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl5 317 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.30%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)64.10%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.60%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.80%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)62.30%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.30%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl5 329 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.50%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.80%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl5 35 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.60%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)34.60%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)32.40%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)38.80%LowDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)46.00%MediumDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)62.30%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.50%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.50%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl5 47 CDS C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.00%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)30.50%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)29.70%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)32.10%LowDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)45.70%MediumDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.90%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.00%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl5 512 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.10%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)56.30%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.90%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)53.20%MediumDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)46.60%MediumDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.80%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl5 58 CDS C-to-U CCG/CCG=>UCG/UUG P=>S/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)15.40%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)15.40%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)15.20%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl5 59 CDS C-to-U CCG/CCG=>CUG/UUG P=>L/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.60%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)34.00%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)34.50%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)33.10%LowDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)42.30%MediumDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)58.40%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl5 64 CDS C-to-U CAC=>UAC H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)64.50%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)20.30%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)18.60%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)23.50%LowDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)29.90%LowDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)43.90%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rpl5 92 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)35.70%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)37.30%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)32.60%LowDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)85.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps12 104 CDS C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.30%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.60%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)75.00%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.10%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.80%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.70%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.40%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps12 146 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.20%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.50%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.20%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.60%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.00%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps12 159 CDS C-to-U GCC=>GCU A=>A Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)5.10%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)5.60%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.10%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)25.90%LowNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)25.90%LowNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)25.90%LowNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps12 196 CDS C-to-U CAC=>UAC H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.80%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.50%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)75.40%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.70%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.80%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.50%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps12 221 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.20%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.00%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)63.50%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.90%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)75.80%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.50%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.60%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps12 269 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.70%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.40%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)66.00%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.40%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.90%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps12 284 CDS C-to-U UCC/UCC=>UUC/UUU S=>F/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.80%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.80%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)64.20%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.90%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps12 285 CDS C-to-U UCC/UCC=>UCU/UUU S=>S/F Synonymous/Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.80%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)51.60%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)51.60%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)51.40%MediumDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.80%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.60%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.50%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.90%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps12 84 CDS C-to-U CCC=>CCU P=>P Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.30%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.80%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.40%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.60%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.10%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.70%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps3 126 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.50%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.40%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)7.60%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)10.90%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)9.20%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)12.20%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps3 1344 CDS C-to-U AGC=>AGU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)58.60%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)53.00%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.50%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)74.00%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps3 1352 CDS C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.50%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.60%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.10%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)98.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps3 1470 CDS C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.50%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.20%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.20%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.00%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps3 1534 CDS C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)62.00%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)62.00%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.90%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps3 1580 CDS C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.90%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.30%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)5.70%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)14.30%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)14.80%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)13.50%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps3 187 CDS C-to-U CUA=>UUA L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)0.60%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)0.70%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)0.40%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.20%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.80%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)2.70%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps3 210 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)6.30%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)6.10%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)6.70%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)10.60%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)9.40%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)11.80%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps3 887 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)50.30%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)50.40%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)50.00%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)79.40%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)75.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 1042 CDS C-to-U CCA/CCA=>UCA/UUA P=>S/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.00%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.60%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)52.00%MediumDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)62.30%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)54.80%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.50%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.50%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 1043 CDS C-to-U CCA/CCA=>CUA/UUA P=>L/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.30%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)47.70%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)51.90%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)41.20%MediumDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)55.30%MediumDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)51.10%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)76.50%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)63.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 1052 CDS C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.80%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)54.70%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)59.40%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)47.60%MediumDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.60%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)56.70%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)80.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.60%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 1057 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.80%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)53.60%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.60%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)47.60%MediumDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)59.10%MediumDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)53.10%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)82.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 175 CDS C-to-U CCG=>UCG P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.20%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)29.80%LowDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)35.50%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)21.50%LowDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)47.40%MediumDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)45.20%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.50%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.00%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)56.50%MediumNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 226 CDS C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.90%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)52.10%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.60%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)43.50%MediumDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.90%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)53.90%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.30%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.80%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.30%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 235 CDS C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.10%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)47.40%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)56.80%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)32.90%LowDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)51.20%MediumDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)47.70%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.60%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 299 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.90%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)56.60%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)63.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)46.70%MediumDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)64.50%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)58.30%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.50%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.40%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.80%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 308 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.60%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)45.20%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)52.20%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)34.60%LowDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.20%MediumDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)50.40%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)84.60%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.40%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 332 CDS C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)83.80%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.10%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)49.10%MediumDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)62.40%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)59.10%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.20%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 377 CDS C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.50%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)58.40%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)64.10%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)49.30%MediumDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.50%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.20%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)95.30%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.60%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 441 CDS C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.50%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)2.10%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)0.50%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)6.80%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)8.30%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.90%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 524 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.50%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)58.20%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)63.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)49.00%MediumDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.60%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.50%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.50%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)97.10%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.10%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 738 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.40%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.60%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)4.00%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)12.70%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)13.90%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)11.30%PoorNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 77 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.10%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)49.60%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)58.00%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)37.60%LowDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)55.30%MediumDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)54.70%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)91.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)87.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 88 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.60%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)40.90%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)45.00%MediumDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)35.00%LowDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)54.00%MediumDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)50.50%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)92.50%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.50%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 956 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.80%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)73.90%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)69.60%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)77.60%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)72.80%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)93.40%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)96.70%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 967 CDS C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.00%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)53.50%MediumDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.80%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)40.60%MediumDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.00%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)57.10%MediumDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.70%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)78.90%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps4 992 CDS C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)88.30%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)63.20%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)65.70%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)59.30%MediumDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)71.20%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)68.80%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.90%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)94.50%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)86.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps7 332 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NANot inoculatedControlControlControlNormalSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)81.20%HighNone26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)66.70%HighDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)70.30%HighDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)60.50%HighDecreased26578708
NAORRM4sil_1Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)67.60%HighDecreased26578708
NAORRM4sil_2Transient SilencingPlants inoculated with agrobacterium carrying an ORRM4/GFP cosilencing constructThe mRNA expression level of ORRM4 is reduced to ~16% compared to the uninoculated and the GFP-silenced controlsNo morphological defectsSeedling2 weeksStrand and Transcript Specific RNA-seq Method (STS-PCRseq)61.50%HighDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.80%HighNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)90.20%HighNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)89.20%HighNone26578708
Arabidopsis thaliana AT1G74230 Mitochondrion rps7 NA 5'UTR C-to-U NA=>NA NA=>NA NA
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)20.80%LowDecreased26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)2.20%PoorDecreased26578708
SALK_023061Corrm4T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4NANANANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.70%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)18.90%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.70%PoorDecreased26578708
SALK_023061Corrm4_1T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.90%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)23.90%LowDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.10%PoorDecreased26578708
SALK_023061Corrm4_2T-DNA InsertionT-DNA is inserted in an intron separating the 5'UTR from the first exon of ORRM4KnockoutSlow growth and late floweringNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)1.50%PoorDecreased26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)53.30%MediumNone26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)8.70%PoorNone26578708
Col-0wtControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.50%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)54.10%MediumNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)8.60%PoorNone26578708
Col-0wt_1ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.90%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)52.20%MediumNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)8.90%PoorNone26578708
Col-0wt_2ControlControlControlNormalNANAStrand and Transcript Specific RNA-seq Method (STS-PCRseq)3.00%PoorNone26578708
Solanum lycopersicum NA Mitochondrion atp1 1490 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool44.50%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool61.97%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion atp4 215 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool61.61%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool83.12%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion atp4 227 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool60.82%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool82.11%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion atp4 248 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool61.23%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool82.75%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion atp4 251 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool61.46%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool82.72%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion atp4 306 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool16.61%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool28.88%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion atp4 395 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool69.67%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool85.52%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion atp4 407 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool70.03%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool85.55%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion atp4 416 CDS C-to-U NA=>NA T=>I Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool66.09%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool84.59%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion atp4 59 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool50.79%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool79.92%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion atp4 71 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool50.04%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool79.43%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion atp4 89 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool48.69%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool77.29%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion atp6 1170 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool9.52%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool23.53%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion atp6 606 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool69.97%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool50.20%MediumDecreased32473605
Solanum lycopersicum NA Mitochondrion atp6 619 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool85.14%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool93.80%HighSimilar32473605
Solanum lycopersicum NA Mitochondrion atp6 807 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool6.99%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool2.68%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion atp6 852 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool79.18%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool70.30%HighSimilar32473605
Solanum lycopersicum NA Mitochondrion atp8 30 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool24.80%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool40.47%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion atp8 39 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool6.27%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool8.70%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion atp8 443 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool47.06%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool64.97%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion atp8 47 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool41.37%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool60.83%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion atp8 58 CDS C-to-U NA=>NA L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool42.21%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool61.45%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion atp8 76 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool42.08%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool61.54%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion atp9 182 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.74%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool5.78%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion atp9 191 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool48.01%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.97%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool42.10%MediumSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool5.98%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion atp9 20 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.78%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool81.63%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool28.39%LowDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool67.06%HighDecreased32473605
Solanum lycopersicum NA Mitochondrion atp9 212 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool45.65%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.42%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.73%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool6.15%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion atp9 223 CDS C-to-U NA=>NA Q=>NA Nonsense
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool44.86%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool11.14%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.78%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool5.99%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion atp9 50 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool82.85%HighNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.97%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool69.08%HighDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool29.29%LowDecreased32473605
Solanum lycopersicum NA Mitochondrion atp9 81 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool81.59%HighNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.33%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool70.71%HighDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool28.84%LowDecreased32473605
Solanum lycopersicum NA Mitochondrion atp9 82 CDS C-to-U NA=>NA L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool83.70%HighNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.93%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool70.98%HighDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool29.06%LowDecreased32473605
Solanum lycopersicum NA Mitochondrion atp9 90 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool77.92%HighNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool38.67%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool66.72%HighDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool28.79%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion atp9 92 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool82.56%HighNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool40.18%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool68.30%HighDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool29.43%LowDecreased32473605
Solanum lycopersicum NA Chloroplast atpA 795 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalLeafTwo-week-oldssRNA-seq assay and the REDiscover tool9.47%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutPale-green leavesLeafTwo-week-oldssRNA-seq assay and the REDiscover tool7.47%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmB 160 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool5.20%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool2.54%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmB 43 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool9.57%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool11.38%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmB 467 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool10.13%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool4.69%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmB 475 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool6.91%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool2.40%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmB 476 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool6.48%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool2.26%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmB 551 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool7.84%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool3.61%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmB 554 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool7.66%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool3.27%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmB 566 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool9.87%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool4.64%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmB 569 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool9.41%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool4.93%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmB 572 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool8.76%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool4.32%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmB 596 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool14.58%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool9.15%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmB 611 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool20.09%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool10.52%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmB 80 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool6.29%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool11.84%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmC 115 CDS C-to-U NA=>NA R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool23.48%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool27.71%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmC 133 CDS C-to-U NA=>NA L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool21.81%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool28.15%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmC 14 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool17.61%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool21.16%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmC 161 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool19.93%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool23.53%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmC 179 CDS C-to-U NA=>NA A=>V Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool21.54%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool25.38%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmC 184 CDS C-to-U NA=>NA R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool19.48%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool24.71%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmC 281 CDS C-to-U NA=>NA T=>I Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool20.48%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool22.76%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmC 299 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool16.70%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool19.64%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmC 331 CDS C-to-U NA=>NA R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool16.77%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool19.95%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmC 5 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool13.45%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool19.71%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmC 6 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool5.75%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool8.86%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFc 103 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool18.66%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool21.22%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFc 122 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool17.05%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool19.28%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFc 1239 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool20.90%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool25.56%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFc 155 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool9.91%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.71%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFc 334 CDS C-to-U NA=>NA L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool13.34%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool19.11%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFc 38 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool18.94%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool21.32%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFc 391 CDS C-to-U NA=>NA R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool24.02%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool28.07%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFc 406 CDS C-to-U NA=>NA R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool26.11%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool30.69%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFc 50 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool18.01%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool20.39%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFc 52 CDS C-to-U NA=>NA R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool17.86%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool20.41%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFc 706 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool25.91%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool31.83%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFc 707 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool26.33%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool32.04%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFc NA NA C-to-U NA=>NA NA=>NA NA
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool7.68%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool2.69%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFn 1291 CDS C-to-U NA=>NA R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool28.23%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool18.25%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFn 1319 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool27.42%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool17.72%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFn 1351 CDS C-to-U NA=>NA R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool26.85%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool16.65%PoorDecreased32473605
Solanum lycopersicum NA Mitochondrion ccmFn 1369 CDS C-to-U NA=>NA R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool27.31%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool16.80%PoorDecreased32473605
Solanum lycopersicum NA Mitochondrion ccmFn 1402 CDS C-to-U NA=>NA R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool28.88%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool17.93%PoorDecreased32473605
Solanum lycopersicum NA Mitochondrion ccmFn 1420 CDS C-to-U NA=>NA R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool28.00%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool17.61%PoorDecreased32473605
Solanum lycopersicum NA Mitochondrion ccmFn 1463 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool27.06%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool17.64%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFn 1487 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool29.26%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool19.70%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFn 1499 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool29.13%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool19.54%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion ccmFn 1534 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool32.99%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool21.66%LowDecreased32473605
Solanum lycopersicum NA Mitochondrion ccmFn 283 CDS C-to-U NA=>NA L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool18.25%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool20.51%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion cob 114 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool8.14%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool1.53%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion cob 298 CDS C-to-U NA=>NA H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool43.55%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool60.29%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion cob 325 CDS C-to-U NA=>NA H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool42.63%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool58.87%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion cob 358 CDS C-to-U NA=>NA R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool45.91%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool60.66%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion cob 53 CDS C-to-U NA=>NA T=>I Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool40.70%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool54.57%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion cob 680 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool51.94%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool57.69%MediumSimilar32473605
Solanum lycopersicum NA Mitochondrion cob 908 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool49.67%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool60.14%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion cox1 11 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool51.13%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool58.77%MediumSimilar32473605
Solanum lycopersicum NA Mitochondrion cox1 1405 CDS C-to-U NA=>NA R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool84.94%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool73.37%HighDecreased32473605
Solanum lycopersicum NA Mitochondrion cox1 1433 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool85.25%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool72.95%HighDecreased32473605
Solanum lycopersicum NA Mitochondrion cox1 1489 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool83.72%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool69.79%HighDecreased32473605
Solanum lycopersicum NA Mitochondrion cox1 15 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool22.69%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool36.06%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion cox1 2 CDS C-to-U NA=>NA T=>M Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool40.89%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool54.93%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion matR 1700 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool37.59%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool27.67%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion matR 1734 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool43.30%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool28.82%LowDecreased32473605
Solanum lycopersicum NA Mitochondrion matR 1756 CDS C-to-U NA=>NA H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool38.56%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool29.50%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion matR 1787 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool38.65%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool28.98%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion matR 1844 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool31.21%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool23.73%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion matR 236 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool19.67%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.31%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion mttB 181 CDS C-to-U CCA/CCA=>UCA/UUA P=>S/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
Solanum lycopersicum cv. Micro-Tom (MT)slorrm4#1Cas9pYLCRISPR/Cas9Pubi-H-SlORRM4 vectorKnockoutDramatic delays in fruit ripening, with significantly decreased respiratory rates and ethylene productionFruit32 dpaDirect Sequencing of PCR ProductsNAMediumIncreased29061908
Solanum lycopersicum cv. Micro-Tom (MT)WTControlControlControlNormalFruit32 dpaDirect Sequencing of PCR Products0.00%UneditedNone29061908
Solanum lycopersicum NA Mitochondrion mttB 275 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool10.07%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool11.11%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion mttB 303 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool6.57%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool8.18%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion mttB 661 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool30.39%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool21.38%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion mttB 667 CDS C-to-U NA=>NA L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool28.60%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool20.62%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion mttB 7 CDS C-to-U NA=>NA R=>NA Nonsense
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool7.52%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool8.90%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion mttB 718 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool31.04%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool21.52%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion mttB 719 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool36.72%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool25.94%LowDecreased32473605
Solanum lycopersicum NA Mitochondrion mttB 764 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool41.27%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool30.50%LowDecreased32473605
Solanum lycopersicum NA Chloroplast
Mitochondrion		 NA NA NA C-to-U NA=>NA NA=>NA NA
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalLeafTwo-week-oldssRNA-seq assay and the REDiscover tool8.69%PoorNone32473605
NAWTControlControlControlNormalLeafTwo-week-oldssRNA-seq assay and the REDiscover tool12.63%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutPale-green leavesLeafTwo-week-oldssRNA-seq assay and the REDiscover tool6.99%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutPale-green leavesLeafTwo-week-oldssRNA-seq assay and the REDiscover tool8.18%PoorSimilar32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool10.72%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool15.40%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool69.41%HighNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool22.32%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool17.66%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool23.34%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool37.90%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool17.95%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool55.30%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool57.15%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool33.89%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool62.59%HighNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool63.18%HighNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool64.29%HighNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool41.86%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool8.52%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool41.36%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.34%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.28%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool11.93%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool55.54%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool36.69%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool56.93%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool53.78%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool53.20%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool46.23%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool51.45%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool48.09%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool31.73%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool20.94%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool36.25%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool7.46%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool43.91%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool16.41%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool8.43%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool5.18%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool5.83%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool5.94%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool5.09%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool16.61%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool16.80%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool6.25%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool16.03%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool15.57%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool11.65%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool14.24%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool13.30%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool14.07%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool8.63%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool8.63%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.86%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool13.72%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool13.08%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool14.34%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool13.27%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool70.83%HighNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool73.62%HighNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool15.76%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool6.38%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool54.75%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool43.53%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool68.75%HighNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool35.25%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool28.20%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool34.03%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool33.23%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool31.23%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool32.70%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool30.80%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool25.96%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool24.72%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool24.76%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool23.83%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool23.68%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool37.01%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool27.96%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool41.10%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool40.76%MediumNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool38.46%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool38.59%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool38.74%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool34.55%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool35.95%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool28.21%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool35.78%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool37.22%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool37.49%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool16.69%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool20.02%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool14.62%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool7.25%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool13.75%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool21.90%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool8.26%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool28.29%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool6.08%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.43%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool8.22%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.89%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool18.67%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool26.19%LowNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool11.25%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool6.17%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool7.81%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool11.28%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool5.85%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool7.31%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool16.82%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool14.81%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool47.57%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool5.41%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool36.31%LowDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.34%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool9.79%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.99%PoorDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool21.27%LowDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool10.19%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.43%LowDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool43.58%MediumDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool27.82%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool53.22%MediumSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool53.73%MediumSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool55.36%MediumSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool46.85%MediumSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool9.65%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool47.26%MediumSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool46.81%MediumSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool46.79%MediumSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool14.35%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool67.22%HighIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool44.44%MediumSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool69.93%HighIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool66.15%HighIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool66.80%HighIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool59.68%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool67.14%HighIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool62.76%HighIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool43.80%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool30.10%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool52.30%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool11.56%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool68.61%HighIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool26.43%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool13.91%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool8.94%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool10.99%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.01%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool10.80%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool36.63%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool37.67%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool14.10%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool37.92%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool36.91%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool29.92%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool36.66%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool34.30%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool36.29%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool22.39%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool22.46%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool34.09%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool36.40%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool35.09%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.25%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool36.32%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool40.18%MediumDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool42.77%MediumDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool10.70%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool4.50%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool43.06%MediumDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool35.74%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool76.05%HighSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool40.92%MediumSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool33.76%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool41.03%MediumSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool40.44%MediumSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool38.65%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool40.66%MediumSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.19%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool33.54%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool32.26%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool32.59%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool32.02%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool32.19%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool51.31%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.06%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool58.05%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool59.10%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool56.24%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool56.48%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool56.86%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool50.73%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool53.18%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool41.91%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool53.21%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool55.58%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool56.67%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool25.88%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool31.58%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool23.16%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool11.74%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool22.39%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool36.10%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool14.42%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool49.57%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool10.77%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool22.41%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool15.16%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool24.22%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool35.45%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool50.47%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool22.66%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.89%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool16.84%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool26.00%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool14.56%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool18.70%PoorIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool46.08%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool41.19%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad3 146 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool91.08%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool77.75%HighDecreased32473605
Solanum lycopersicum NA Mitochondrion nad3 208 CDS C-to-U CCU/CCU=>UCU/UUU
NA=>NA		 P=>S/F
P=>S		 Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
Solanum lycopersicum cv. Micro-Tom (MT)slorrm4#1Cas9pYLCRISPR/Cas9Pubi-H-SlORRM4 vectorKnockoutDramatic delays in fruit ripening, with significantly decreased respiratory rates and ethylene productionFruit32 dpaDirect Sequencing of PCR ProductsNAMediumDecreased29061908
Solanum lycopersicum cv. Micro-Tom (MT)slorrm4#1Cas9pYLCRISPR/Cas9Pubi-H-SlORRM4 vectorKnockoutDramatic delays in fruit ripening, with significantly decreased respiratory rates and ethylene productionLeaf32 dpaDirect Sequencing of PCR ProductsNAHighSimilar29061908
Solanum lycopersicum cv. Micro-Tom (MT)WTControlControlControlNormalFruit32 dpaDirect Sequencing of PCR ProductsNAHighNone29061908
Solanum lycopersicum cv. Micro-Tom (MT)WTControlControlControlNormalLeaf32 dpaDirect Sequencing of PCR ProductsNAHighNone29061908
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool86.94%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool59.36%MediumDecreased32473605
Solanum lycopersicum NA Mitochondrion nad3 209 CDS C-to-U CCU/CCU=>CUU/UUU
NA=>NA		 P=>L/F
P=>L		 Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
Solanum lycopersicum cv. Micro-Tom (MT)slorrm4#1Cas9pYLCRISPR/Cas9Pubi-H-SlORRM4 vectorKnockoutDramatic delays in fruit ripening, with significantly decreased respiratory rates and ethylene productionFruit32 dpaDirect Sequencing of PCR ProductsNAMediumDecreased29061908
Solanum lycopersicum cv. Micro-Tom (MT)slorrm4#1Cas9pYLCRISPR/Cas9Pubi-H-SlORRM4 vectorKnockoutDramatic delays in fruit ripening, with significantly decreased respiratory rates and ethylene productionLeaf32 dpaDirect Sequencing of PCR ProductsNAHighSimilar29061908
Solanum lycopersicum cv. Micro-Tom (MT)WTControlControlControlNormalFruit32 dpaDirect Sequencing of PCR Products100.00%CompleteNone29061908
Solanum lycopersicum cv. Micro-Tom (MT)WTControlControlControlNormalLeaf32 dpaDirect Sequencing of PCR Products100.00%CompleteNone29061908
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool87.26%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool60.06%HighDecreased32473605
Solanum lycopersicum NA Mitochondrion nad3 215 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool87.64%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool61.04%HighDecreased32473605
Solanum lycopersicum NA Mitochondrion nad3 230 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool89.06%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool52.88%MediumDecreased32473605
Solanum lycopersicum NA Mitochondrion nad3 247 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool87.81%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool51.82%MediumDecreased32473605
Solanum lycopersicum NA Mitochondrion nad3 251 CDS C-to-U CCC=>CUC
NA=>NA		 P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
Solanum lycopersicum cv. Micro-Tom (MT)slorrm4#1Cas9pYLCRISPR/Cas9Pubi-H-SlORRM4 vectorKnockoutDramatic delays in fruit ripening, with significantly decreased respiratory rates and ethylene productionFruit32 dpaDirect Sequencing of PCR ProductsNAMediumDecreased29061908
Solanum lycopersicum cv. Micro-Tom (MT)slorrm4#1Cas9pYLCRISPR/Cas9Pubi-H-SlORRM4 vectorKnockoutDramatic delays in fruit ripening, with significantly decreased respiratory rates and ethylene productionLeaf32 dpaDirect Sequencing of PCR ProductsNAHighSimilar29061908
Solanum lycopersicum cv. Micro-Tom (MT)WTControlControlControlNormalFruit32 dpaDirect Sequencing of PCR ProductsNAHighNone29061908
Solanum lycopersicum cv. Micro-Tom (MT)WTControlControlControlNormalLeaf32 dpaDirect Sequencing of PCR ProductsNAHighNone29061908
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool86.07%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool46.03%MediumDecreased32473605
Solanum lycopersicum NA Mitochondrion nad3 266 CDS C-to-U CCA=>CUA
NA=>NA		 P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
Solanum lycopersicum cv. Micro-Tom (MT)slorrm4#1Cas9pYLCRISPR/Cas9Pubi-H-SlORRM4 vectorKnockoutDramatic delays in fruit ripening, with significantly decreased respiratory rates and ethylene productionFruit32 dpaDirect Sequencing of PCR ProductsNAMediumDecreased29061908
Solanum lycopersicum cv. Micro-Tom (MT)slorrm4#1Cas9pYLCRISPR/Cas9Pubi-H-SlORRM4 vectorKnockoutDramatic delays in fruit ripening, with significantly decreased respiratory rates and ethylene productionLeaf32 dpaDirect Sequencing of PCR Products100.00%CompleteSimilar29061908
Solanum lycopersicum cv. Micro-Tom (MT)WTControlControlControlNormalFruit32 dpaDirect Sequencing of PCR Products100.00%CompleteNone29061908
Solanum lycopersicum cv. Micro-Tom (MT)WTControlControlControlNormalLeaf32 dpaDirect Sequencing of PCR Products100.00%CompleteNone29061908
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool85.28%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool66.41%HighDecreased32473605
Solanum lycopersicum NA Mitochondrion nad3 275 CDS C-to-U UCU=>UUU
NA=>NA		 S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
Solanum lycopersicum cv. Micro-Tom (MT)slorrm4#1Cas9pYLCRISPR/Cas9Pubi-H-SlORRM4 vectorKnockoutDramatic delays in fruit ripening, with significantly decreased respiratory rates and ethylene productionFruit32 dpaDirect Sequencing of PCR ProductsNAMediumDecreased29061908
Solanum lycopersicum cv. Micro-Tom (MT)slorrm4#1Cas9pYLCRISPR/Cas9Pubi-H-SlORRM4 vectorKnockoutDramatic delays in fruit ripening, with significantly decreased respiratory rates and ethylene productionLeaf32 dpaDirect Sequencing of PCR ProductsNAHighSimilar29061908
Solanum lycopersicum cv. Micro-Tom (MT)WTControlControlControlNormalFruit32 dpaDirect Sequencing of PCR ProductsNAHighNone29061908
Solanum lycopersicum cv. Micro-Tom (MT)WTControlControlControlNormalLeaf32 dpaDirect Sequencing of PCR ProductsNAHighNone29061908
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool87.15%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool60.90%HighDecreased32473605
Solanum lycopersicum NA Mitochondrion nad3 317 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool80.04%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool62.84%HighDecreased32473605
Solanum lycopersicum NA Mitochondrion nad4 1006 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool24.96%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.38%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 1010 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool26.26%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool41.36%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 1016 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool30.28%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool44.91%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 107 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool25.49%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool45.07%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 124 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool13.72%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool35.88%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 154 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool25.58%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool44.37%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 158 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool25.62%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool43.86%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 166 CDS C-to-U NA=>NA R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool25.87%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool45.02%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 197 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool24.77%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool43.97%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 261 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool22.73%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.21%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 29 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool21.28%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool41.74%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 362 CDS C-to-U NA=>NA T=>I Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool24.69%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool46.13%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 376 CDS C-to-U NA=>NA R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool26.55%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool48.88%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 433 CDS C-to-U NA=>NA L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool28.82%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool48.61%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 436 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool29.38%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool48.60%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 437 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool28.67%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool48.37%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 577 CDS C-to-U NA=>NA L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool36.63%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool50.92%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 608 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.40%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool52.61%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 659 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool38.58%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool53.07%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 74 CDS C-to-U NA=>NA T=>I Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool10.67%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool21.17%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 767 CDS C-to-U NA=>NA A=>V Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool37.51%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool53.63%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 77 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool23.95%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool43.48%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 836 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool37.68%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool53.21%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 837 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool9.13%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool19.84%PoorIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 887 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool35.41%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool50.58%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 952 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool19.44%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool34.10%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4 953 CDS C-to-U AUC=>AUU I=>I Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
Solanum lycopersicum cv. Micro-Tom (MT)slorrm4#1Cas9pYLCRISPR/Cas9Pubi-H-SlORRM4 vectorKnockoutDramatic delays in fruit ripening, with significantly decreased respiratory rates and ethylene productionFruit32 dpaDirect Sequencing of PCR ProductsNALowDecreased29061908
Solanum lycopersicum cv. Micro-Tom (MT)WTControlControlControlNormalFruit32 dpaDirect Sequencing of PCR ProductsNAHighNone29061908
Solanum lycopersicum NA Mitochondrion nad4L 100 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool15.11%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool30.70%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4L 110 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool20.39%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool35.79%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4L 131 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool23.84%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool44.46%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4L 158 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool30.14%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool52.96%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4L 179 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool38.03%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool60.95%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4L 188 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool40.17%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool63.71%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4L 197 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool40.75%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool64.65%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4L 252 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool5.85%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.01%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion nad4L 281 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool52.54%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool74.22%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4L 47 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool17.81%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool37.60%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion nad4L 95 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.33%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool26.86%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion nad6 103 CDS C-to-U NA=>NA R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool69.14%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool52.42%MediumDecreased32473605
Solanum lycopersicum NA Mitochondrion nad6 159 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool5.23%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool3.75%PoorSimilar32473605
Solanum lycopersicum NA Mitochondrion nad6 161 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool70.38%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool54.02%MediumDecreased32473605
Solanum lycopersicum NA Mitochondrion nad6 191 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool72.01%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool55.20%MediumDecreased32473605
Solanum lycopersicum NA Mitochondrion nad6 26 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool66.26%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool54.18%MediumDecreased32473605
Solanum lycopersicum NA Mitochondrion nad6 569 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool58.57%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool50.71%MediumSimilar32473605
Solanum lycopersicum NA Mitochondrion nad6 88 CDS C-to-U NA=>NA L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool70.17%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool55.89%MediumDecreased32473605
Solanum lycopersicum NA Mitochondrion nad6 95 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool70.55%HighNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool55.86%MediumDecreased32473605
Solanum lycopersicum NA Mitochondrion nad7 1050 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool33.09%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool55.50%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 1057 CDS C-to-U NA=>NA R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool31.56%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool52.55%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 1088 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool31.39%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool61.02%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 1103 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool32.73%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool60.65%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 1124 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool31.30%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool58.59%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 1137 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool6.55%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool17.64%PoorIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 1166 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool25.52%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool55.63%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 200 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool11.98%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool26.47%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 209 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool11.18%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool24.16%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 244 CDS C-to-U NA=>NA H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool19.95%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool41.16%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 251 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool19.06%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool41.87%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 316 CDS C-to-U NA=>NA R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool19.12%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool43.44%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 335 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool20.51%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool45.61%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 344 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool20.53%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool46.04%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 38 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.04%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.04%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 383 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool22.61%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool49.58%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 444 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.05%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool35.66%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 578 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool25.00%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool57.40%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 724 CDS C-to-U NA=>NA H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool30.50%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool57.67%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 739 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool30.42%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool57.10%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 740 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool30.57%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool57.22%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 769 CDS C-to-U NA=>NA R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool29.98%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool51.47%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 77 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool14.41%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.33%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 83 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.84%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool38.16%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 926 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool15.10%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool30.68%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 944 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool32.43%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool58.77%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 973 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool35.68%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool61.86%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion nad7 NA NA C-to-U NA=>NA NA=>NA NA
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool15.22%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool8.93%PoorNone32473605
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool8.50%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool20.19%LowSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.76%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool26.89%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion nad9 298 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool39.62%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool45.59%MediumSimilar32473605
Solanum lycopersicum NA Mitochondrion nad9 92 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool32.56%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool42.01%MediumSimilar32473605
Solanum lycopersicum NA Chloroplast ndhD 1470 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalLeafTwo-week-oldssRNA-seq assay and the REDiscover tool6.67%PoorNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutPale-green leavesLeafTwo-week-oldssRNA-seq assay and the REDiscover tool5.30%PoorSimilar32473605
Solanum lycopersicum NA Chloroplast ndhD 599 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalLeafTwo-week-oldssRNA-seq assay and the REDiscover tool54.05%MediumNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutPale-green leavesLeafTwo-week-oldssRNA-seq assay and the REDiscover tool60.83%HighSimilar32473605
Solanum lycopersicum NA Mitochondrion rpl2 206 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool6.66%PoorNone32473605
Solanum lycopersicum NA Mitochondrion rpl2 NULL CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool9.89%PoorSimilar32473605
Solanum lycopersicum NA Chloroplast rpoA 200 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalLeafTwo-week-oldssRNA-seq assay and the REDiscover tool28.04%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutPale-green leavesLeafTwo-week-oldssRNA-seq assay and the REDiscover tool22.16%LowSimilar32473605
Solanum lycopersicum NA Chloroplast rpoA 65 CDS C-to-U NA=>NA T=>I Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalLeafTwo-week-oldssRNA-seq assay and the REDiscover tool23.71%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutPale-green leavesLeafTwo-week-oldssRNA-seq assay and the REDiscover tool19.92%PoorSimilar32473605
Solanum lycopersicum NA Chloroplast rpoB 2000 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalLeafTwo-week-oldssRNA-seq assay and the REDiscover tool21.10%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutPale-green leavesLeafTwo-week-oldssRNA-seq assay and the REDiscover tool26.27%LowSimilar32473605
Solanum lycopersicum NA Chloroplast rpoB 2426 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalLeafTwo-week-oldssRNA-seq assay and the REDiscover tool22.41%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutPale-green leavesLeafTwo-week-oldssRNA-seq assay and the REDiscover tool26.24%LowSimilar32473605
Solanum lycopersicum NA Chloroplast rpoB 338 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalLeafTwo-week-oldssRNA-seq assay and the REDiscover tool27.38%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutPale-green leavesLeafTwo-week-oldssRNA-seq assay and the REDiscover tool35.97%LowSimilar32473605
Solanum lycopersicum NA Chloroplast rpoB 473 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalLeafTwo-week-oldssRNA-seq assay and the REDiscover tool27.39%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutPale-green leavesLeafTwo-week-oldssRNA-seq assay and the REDiscover tool37.09%LowSimilar32473605
Solanum lycopersicum NA Chloroplast rpoB 551 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalLeafTwo-week-oldssRNA-seq assay and the REDiscover tool21.52%LowNone32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutPale-green leavesLeafTwo-week-oldssRNA-seq assay and the REDiscover tool27.69%LowSimilar32473605
Solanum lycopersicum NA Mitochondrion rps10 2 CDS C-to-U NA=>NA T=>M Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool32.02%LowNone32473605
Solanum lycopersicum NA Mitochondrion rps10 238 CDS C-to-U NA=>NA R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool31.19%LowNone32473605
Solanum lycopersicum NA Mitochondrion rps10 302 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool44.94%MediumNone32473605
Solanum lycopersicum NA Mitochondrion rps10 43 CDS C-to-U NA=>NA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool8.89%PoorNone32473605
Solanum lycopersicum NA Mitochondrion rps10 NULL CDS C-to-U NA=>NA R=>W
P=>S
S=>L
T=>M		 Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool43.36%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool31.68%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool58.43%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool52.34%MediumIncreased32473605
Solanum lycopersicum NA Mitochondrion rps13 100 CDS C-to-U NA=>NA R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool10.32%PoorNone32473605
Solanum lycopersicum NA Mitochondrion rps13 287 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool37.65%LowNone32473605
Solanum lycopersicum NA Mitochondrion rps13 343 CDS C-to-U NA=>NA R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool15.35%PoorNone32473605
Solanum lycopersicum NA Mitochondrion rps13 56 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool27.50%LowNone32473605
Solanum lycopersicum NA Mitochondrion rps13 NULL CDS C-to-U NA=>NA R=>W
R=>C
S=>L		 Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool27.47%LowIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool51.19%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool56.58%MediumIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool64.55%HighIncreased32473605
Solanum lycopersicum NA Mitochondrion rps4 1004 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool6.78%PoorNone32473605
Solanum lycopersicum NA Mitochondrion rps4 1018 CDS C-to-U NA=>NA R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool5.47%PoorNone32473605
Solanum lycopersicum NA Mitochondrion rps4 278 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool5.82%PoorNone32473605
Solanum lycopersicum NA Mitochondrion rps4 289 CDS C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
Solanum lycopersicum cv. Micro-Tom (MT)slorrm4#1Cas9pYLCRISPR/Cas9Pubi-H-SlORRM4 vectorKnockoutDramatic delays in fruit ripening, with significantly decreased respiratory rates and ethylene productionFruit32 dpaDirect Sequencing of PCR ProductsNAMediumIncreased29061908
Solanum lycopersicum cv. Micro-Tom (MT)WTControlControlControlNormalFruit32 dpaDirect Sequencing of PCR ProductsNAPoorNone29061908
Solanum lycopersicum NA Mitochondrion rps4 290 CDS C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool5.92%PoorNone32473605
Solanum lycopersicum NA Mitochondrion rps4 347 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool5.53%PoorNone32473605
Solanum lycopersicum NA Mitochondrion rps4 NULL CDS C-to-U NA=>NA R=>W
P=>L
S=>L		 Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool16.43%PoorIncreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool15.23%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool16.75%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool15.33%PoorSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool16.02%PoorIncreased32473605
Solanum lycopersicum NA Mitochondrion sdh3 74 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool12.79%PoorNone32473605
Solanum lycopersicum NA Mitochondrion sdh3 NULL CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool26.04%LowIncreased32473605
Solanum lycopersicum NA Mitochondrion sdh4 132 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool18.84%PoorNone32473605
Solanum lycopersicum NA Mitochondrion sdh4 153 CDS C-to-U UUC=>UUU
NA=>NA		 F=>F
NA=>NA		 Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
Solanum lycopersicum cv. Micro-Tom (MT)slorrm4#1Cas9pYLCRISPR/Cas9Pubi-H-SlORRM4 vectorKnockoutDramatic delays in fruit ripening, with significantly decreased respiratory rates and ethylene productionFruit32 dpaDirect Sequencing of PCR ProductsNALowDecreased29061908
Solanum lycopersicum cv. Micro-Tom (MT)slorrm4#1Cas9pYLCRISPR/Cas9Pubi-H-SlORRM4 vectorKnockoutDramatic delays in fruit ripening, with significantly decreased respiratory rates and ethylene productionLeaf32 dpaDirect Sequencing of PCR ProductsNAMediumSimilar29061908
Solanum lycopersicum cv. Micro-Tom (MT)WTControlControlControlNormalFruit32 dpaDirect Sequencing of PCR ProductsNAHighNone29061908
Solanum lycopersicum cv. Micro-Tom (MT)WTControlControlControlNormalLeaf32 dpaDirect Sequencing of PCR ProductsNAHighNone29061908
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool75.26%HighNone32473605
Solanum lycopersicum NA Mitochondrion sdh4 155 CDS C-to-U CCA=>CUA
NA=>NA		 P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
Solanum lycopersicum cv. Micro-Tom (MT)slorrm4#1Cas9pYLCRISPR/Cas9Pubi-H-SlORRM4 vectorKnockoutDramatic delays in fruit ripening, with significantly decreased respiratory rates and ethylene productionFruit32 dpaDirect Sequencing of PCR ProductsNAMediumDecreased29061908
Solanum lycopersicum cv. Micro-Tom (MT)slorrm4#1Cas9pYLCRISPR/Cas9Pubi-H-SlORRM4 vectorKnockoutDramatic delays in fruit ripening, with significantly decreased respiratory rates and ethylene productionLeaf32 dpaDirect Sequencing of PCR ProductsNAHighSimilar29061908
Solanum lycopersicum cv. Micro-Tom (MT)WTControlControlControlNormalFruit32 dpaDirect Sequencing of PCR ProductsNAHighNone29061908
Solanum lycopersicum cv. Micro-Tom (MT)WTControlControlControlNormalLeaf32 dpaDirect Sequencing of PCR ProductsNAHighNone29061908
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool80.38%HighNone32473605
Solanum lycopersicum NA Mitochondrion sdh4 186 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool8.02%PoorNone32473605
Solanum lycopersicum NA Mitochondrion sdh4 192 CDS C-to-U NA=>NA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool80.37%HighNone32473605
Solanum lycopersicum NA Mitochondrion sdh4 203 CDS C-to-U NA=>NA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool81.91%HighNone32473605
Solanum lycopersicum NA Mitochondrion sdh4 259 CDS C-to-U NA=>NA H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool77.61%HighNone32473605
Solanum lycopersicum NA Mitochondrion sdh4 353 CDS C-to-U NA=>NA S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlControlNormalFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool59.90%MediumNone32473605
Solanum lycopersicum NA Mitochondrion sdh4 NULL CDS C-to-U NA=>NA H=>Y
NA=>NA
P=>L
S=>F		 Recoding
Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool68.16%HighSimilar32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool6.29%PoorDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool52.35%MediumDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool62.33%HighDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool70.45%HighDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool43.68%MediumDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool69.05%HighDecreased32473605
NAslorrm4T4 generation of CRISPR/Cas9-mediated SlORRM4 mutantsThe SlORRM4 gene was knocked out by a 544-bp deletion created by CRISPR/Cas9 gene editing.KnockoutDelayed fruit ripeningFruit36 days post anthesis (DPA)ssRNA-seq assay and the REDiscover tool4.69%PoorSimilar32473605
Last update: Jul 2021 (version 1.0)