| Arabidopsis thaliana |
AT2G15690 |
Plastid |
accD
|
1568 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 74.98% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 85.56% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
accD
|
794 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.82% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.19% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp1
|
1110 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
GUC=>GUU
NA=>NA |
V=>V
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 5.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 5.93% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 0.26% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp1
|
1178 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 97.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.24% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.63% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp1
|
1292 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG=>CUG
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 96.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.19% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.35% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp1
|
1415 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA=>CUA
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 83.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.17% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 83.43% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp1
|
1484 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.56% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.52% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp4
|
138 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
AUC=>AUU
NA=>NA |
I=>I
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 5.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 85.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 84.94% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 4.64% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp4
|
144 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UUC=>UUU
NA=>NA |
F=>F
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 45.00% | Medium | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 11.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 10.57% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 45.54% | Medium | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp4
|
215 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 94.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.64% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.75% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp4
|
248 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU=>CUU
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 95.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.93% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.97% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp4
|
250 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 88.31% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.96% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp4
|
251 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG/CCG=>CUG/UUG
NA=>NA |
P=>L/L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 96.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.18% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.79% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp4
|
382 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 35.88% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 42.39% | Medium | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp4
|
395 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 31.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.80% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 31.19% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp4
|
416 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
ACU=>AUU
NA=>NA |
T=>I
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 6.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 95.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.27% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 5.56% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp4
|
89 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 93.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.21% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.96% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp6
|
475 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
CCA=>UCA |
P=>S |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 88.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp8
|
389 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 34.00% | Low | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 17.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp8
|
408 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
AUC=>AUU |
I=>I |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 37.00% | Low | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 10.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp9
|
167 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.34% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.02% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp9
|
224 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.43% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 72.87% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp9
|
53 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.18% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.44% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
atp9
|
83 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.13% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.10% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
atpF
|
92 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA=>CUA
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 2.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 91.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.23% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 2.14% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
atpH
|
NA |
UTR |
TAIR (v10) |
TAIR (v10) |
Genomic position |
13210 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 10.00% | Poor | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 3.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
128 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 64.21% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 78.26% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
137 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 71.74% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 82.81% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
138 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.62% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 7.55% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
148 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 75.55% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 81.96% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
149 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 74.24% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 79.58% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
154 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 71.80% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 84.72% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
159 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
AUC=>AUU
NA=>NA |
I=>I
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 27.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 66.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 65.70% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 27.40% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
160 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 65.90% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 80.23% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
164 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG=>CUG
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 79.00% | High | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 49.00% | Medium | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 49.33% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 79.14% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
172 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 73.19% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 84.68% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
179 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 77.89% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 82.91% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
181 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU=>UCU
NA=>NA |
P=>S
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 4.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 83.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 82.78% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 4.10% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
193 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 56.15% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 70.76% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
194 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 57.23% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 71.98% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
196 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGA=>UGA
NA=>NA |
R=>Stop codon
NA=>NA |
Nonsense
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 22.00% | Low | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 3.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.42% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 22.17% | Low | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
28 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.55% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 87.11% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
286 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGG=>UGG
NA=>NA |
R=>W
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 46.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 93.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.85% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 46.25% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
304 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGU=>UGU
NA=>NA |
R=>C
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 6.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 91.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.09% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 5.77% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
338 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 4.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 95.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.00% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.86% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
367 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 85.70% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.23% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
379 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 84.23% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 89.35% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
380 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA/CCA=>CUA/UUA
NA=>NA |
P=>L/L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 17.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 93.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.41% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 17.16% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
406 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 33.58% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 47.91% | Medium | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
424 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.96% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.71% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
428 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 66.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 96.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.55% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 65.53% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
441 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 8.64% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 10.67% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
45 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
UCC=>UCU |
S=>S |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 5.00% | Poor | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 1.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
467 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 57.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 93.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.02% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 56.51% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
475 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.52% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.63% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
476 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.35% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.59% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
485 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.14% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.68% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
502 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CUA=>UUA
NA=>NA |
L=>L
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 4.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 9.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 9.14% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.58% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
512 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.25% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.44% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
514 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.28% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.82% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
551 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 4.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 94.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.30% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.73% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
554 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.71% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.44% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
566 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCC=>UUC
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 13.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 94.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.02% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 13.20% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
569 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.51% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.70% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
576 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UUC=>UUU
NA=>NA |
F=>F
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 7.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 20.00% | Low | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 19.56% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 6.56% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
596 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 93.00% | High | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 84.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 83.74% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.58% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
71 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 58.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 93.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.21% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 57.58% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
75 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UUC=>UUU
NA=>NA |
F=>F
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 7.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 6.67% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 0.21% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
78 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CUC=>CUU
NA=>NA |
L=>L
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 4.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.52% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 0.25% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
80 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 79.01% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 88.57% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
87 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
AUC=>AUU |
I=>I |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 2.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 7.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmB
|
90 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
GUC=>GUU |
V=>V |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 11.00% | Poor | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 3.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
103 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.82% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.01% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
133 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.85% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 78.29% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
179 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.23% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 2.49% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
184 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 83.84% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 87.33% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
252 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 32.66% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 19.79% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
331 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.65% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 29.82% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
381 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 30.74% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 9.44% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
395 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.22% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.26% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
400 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.81% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.49% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
421 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 80.65% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 1.19% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
436 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.99% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.33% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
446 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.21% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 11.97% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
458 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.43% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 52.88% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
463 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.11% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 2.55% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
467 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.53% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 41.04% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
473 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.90% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 11.34% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
477 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 2.03% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 14.20% | Poor | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
497 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.13% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 87.97% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
521 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 23.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.00% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 19.95% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
548 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.52% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.49% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
568 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.47% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.79% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
575 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCC=>CUC
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 47.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.97% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 43.76% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
576 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 4.77% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 0.93% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
608 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.30% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.83% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
614 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.47% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.25% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
618 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
ACC=>ACU
NA=>NA |
T=>T
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 4.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 84.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 81.79% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.17% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
619 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGU=>UGU
NA=>NA |
R=>C
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 7.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.60% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 5.34% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
624 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 69.73% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 68.68% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
650 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU=>CUU
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 5.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.91% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 11.76% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
656 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.72% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.51% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmC
|
673 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 80.00% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 76.79% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
103 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCC=>UCC
NA=>NA |
P=>S
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 37.00% | Low | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 14.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 52.54% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 57.00% | Medium | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
1150 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CUA=>UUA
NA=>NA |
L=>L
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 1.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 5.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 5.39% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 1.43% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
1172 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 4.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 89.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 89.08% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.60% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
1215 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
ACC=>ACU
NA=>NA |
T=>T
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 36.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 51.00% | Medium | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 50.96% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 36.34% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
122 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 55.86% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 30.52% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
123 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 46.35% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 22.95% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
1246 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGG=>UGG
NA=>NA |
R=>W
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 77.00% | High | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 61.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 61.27% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 77.36% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
1280 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 6.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 40.00% | Medium | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 39.67% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 6.19% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
1327 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGA=>UGA
NA=>NA |
R=>Stop codon
NA=>NA |
Nonsense
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 44.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 93.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.28% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 44.26% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
146 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU=>CUU
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 4.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 49.00% | Medium | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 64.00% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 5.32% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
155 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 58.91% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 57.53% | Medium | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
160 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 56.61% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 60.62% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
175 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CUA=>UUA
NA=>NA |
L=>L
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 24.00% | Low | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 36.90% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 0.48% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
333 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UUC=>UUU
NA=>NA |
F=>F
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 18.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 43.00% | Medium | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 47.16% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 20.42% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
334 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 59.97% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 54.13% | Medium | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
378 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 12.45% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 11.94% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
406 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 47.48% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 51.59% | Medium | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
415 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CUC=>UUC
NA=>NA |
L=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 8.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 57.00% | Medium | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 58.98% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 9.45% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
50 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU=>CUU
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 13.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 51.00% | Medium | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 57.30% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 16.25% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
561 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 21.96% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 21.36% | Low | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
832 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
CAU=>UAU |
H=>Y |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 5.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 14.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFc
|
925 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 1.66% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 1.68% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn1
|
104 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.08% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 89.29% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn1
|
143 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 100.00% | Complete | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 4.03% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn1
|
157 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.51% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.67% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn1
|
262 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.85% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 44.85% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn1
|
269 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.53% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.55% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn1
|
289 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.46% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.40% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn1
|
371 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 9.11% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 14.03% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn1
|
378 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 87.19% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 84.96% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn1
|
484 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 5.45% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 1.94% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn1
|
709 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 67.19% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 75.02% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn1
|
710 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.03% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.02% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn1
|
779 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.96% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.83% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn1
|
791 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.87% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.85% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn1
|
806 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.46% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.02% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn1
|
955 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 89.52% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.96% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn2
|
176 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 75.00% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 64.34% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn2
|
208 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 23.81% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 48.85% | Medium | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn2
|
226 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 71.11% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 64.96% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn2
|
259 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 78.33% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 21.09% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn2
|
277 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.00% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 39.17% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn2
|
320 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 57.63% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 33.29% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn2
|
344 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.41% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 85.05% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn2
|
356 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.44% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 85.47% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn2
|
391 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.63% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.18% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn2
|
65 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 83.08% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 73.22% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
ccmFn2
|
93 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 14.81% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 39.79% | Low | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
clpP
|
559 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 71.85% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 1.98% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
clpP
|
69942 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 2.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 72.00% | High | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cob
|
1084 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU=>UCU
NA=>NA |
P=>S
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 99.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.80% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.84% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cob
|
114 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
UUC=>UUU |
F=>F |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 5.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cob
|
118 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG=>UCG
NA=>NA |
P=>S
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 97.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.59% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.52% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cob
|
286 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.76% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.44% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cob
|
325 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CAU=>UAU
NA=>NA |
H=>Y
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 94.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.07% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.86% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cob
|
381 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
UUC=>UUU |
F=>F |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 18.00% | Poor | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 9.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cob
|
568 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CAU=>UAU
NA=>NA |
H=>Y
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 96.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.47% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.25% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cob
|
610 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 13.50% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 16.01% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cob
|
853 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CAU=>UAU
NA=>NA |
H=>Y
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 96.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.23% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.89% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cob
|
907 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
CCA/CCA=>UCA/UUA |
P=>S/L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 2.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cob
|
908 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA/CCA=>CUA/UUA
NA=>NA |
P=>L/L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 96.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.40% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.29% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cob
|
924 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CUC=>CUU
NA=>NA |
L=>L
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 1.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 12.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 12.95% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 1.20% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cob
|
982 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CAC=>UAC
NA=>NA |
H=>Y
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 97.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.53% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.62% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox2
|
138 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 79.22% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 82.09% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox2
|
25 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 53.91% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 1.28% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox2
|
250 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
CUU=>UUU |
L=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 1.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 5.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox2
|
253 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGG=>UGG
NA=>NA |
R=>W
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 23.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.22% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 22.85% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox2
|
27 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 82.62% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 88.38% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox2
|
278 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 31.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 97.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.29% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 31.43% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox2
|
379 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGG=>UGG
NA=>NA |
R=>W
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 16.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.19% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 15.67% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox2
|
476 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.79% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.04% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox2
|
495 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
GAC=>GAU |
D=>D |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 4.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 9.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox2
|
557 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU=>CUU
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 99.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.63% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.98% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox2
|
581 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 68.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.83% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 67.75% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox2
|
698 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
ACG=>AUG
NA=>NA |
T=>M
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 21.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.58% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 44.21% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox2
|
71 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.86% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 24.07% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox2
|
721 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU=>UCU
NA=>NA |
P=>S
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 62.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.93% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 64.32% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox2
|
742 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGG=>UGG
NA=>NA |
R=>W
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 9.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.73% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 10.60% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox3
|
112 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA=>UCA
NA=>NA |
P=>S
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 92.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.46% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.42% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox3
|
245 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU=>CUU
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 9.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.48% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 9.31% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox3
|
257 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 2.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 93.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.68% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 2.10% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox3
|
311 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.83% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.61% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox3
|
314 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 10.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.55% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 11.75% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox3
|
413 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU=>CUU
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 1.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 86.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.59% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 1.15% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox3
|
422 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU=>CUU
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 91.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.85% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.82% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox3
|
567 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 1.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox3
|
603 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 7.87% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 10.95% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox3
|
NA |
3'UTR |
EnsemblGenomes (release 39) |
BK010421 |
NA |
130 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.12% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.23% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox3
|
NA |
3'UTR |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
186 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 19.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 81.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 87.03% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 27.66% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox3
|
NA |
3'UTR |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
49 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 30.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 44.00% | Medium | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 50.86% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 30.96% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
cox3
|
NA |
3'UTR |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
82 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 6.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 73.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 78.80% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 7.61% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
matK
|
640 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 79.42% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 88.58% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
matR
|
1395 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
ACC=>ACU |
T=>T |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 4.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
matR
|
1408 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
CGG=>UGG |
R=>W |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 15.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
matR
|
1593 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 45.58% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 57.31% | Medium | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
matR
|
1596 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCC=>CCU
NA=>NA |
P=>P
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 23.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 45.00% | Medium | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 44.87% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 22.79% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
matR
|
1730 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.62% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.81% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
matR
|
1731 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 69.11% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 50.27% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
matR
|
1751 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.74% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 88.39% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
matR
|
1771 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGC=>UGC
NA=>NA |
R=>C
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 49.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 80.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 80.00% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 49.08% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
matR
|
1807 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CAC=>UAC
NA=>NA |
H=>Y
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 92.00% | High | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 81.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 82.21% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.37% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
matR
|
1895 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.86% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.62% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
matR
|
374 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 79.26% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.72% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
matR
|
461 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.15% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 14.18% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
144 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UUC=>UUU
NA=>NA |
F=>F
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 26.00% | Low | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 28.24% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 0.47% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
145 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG=>UCG
NA=>NA |
P=>S
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 3.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 86.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.31% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.54% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
161 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 29.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 96.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.46% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 29.73% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
164 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA=>CUA
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 83.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 96.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.20% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 85.07% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
173 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 78.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 95.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.15% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 79.94% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
175 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
CCC/CCC=>UCC/UCU |
P=>S/S |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 4.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
177 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCC/CCC=>CCU/UCU
NA=>NA |
P=>P/S
NA=>NA |
Synonymous/Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 4.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 10.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 9.73% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.87% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
361 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CUC=>UUC
NA=>NA |
L=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 77.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 95.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.85% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 83.94% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
364 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CAU=>UAU
NA=>NA |
H=>Y
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 73.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 94.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.90% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 80.60% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
377 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 1.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 60.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 56.75% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 1.53% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
379 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGC=>UGC
NA=>NA |
R=>C
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 88.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 96.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.07% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.32% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
384 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
UUC=>UUU |
F=>F |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 4.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 13.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
387 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UUC=>UUU
NA=>NA |
F=>F
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 1.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 23.00% | Low | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 26.55% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 1.03% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
406 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU/CCU=>UCU/UUU
NA=>NA |
P=>S/F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 43.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 93.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.90% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 53.33% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
407 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU/CCU=>CUU/UUU
NA=>NA |
P=>L/F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 33.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 93.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.21% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 41.82% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
409 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCC=>UCC
NA=>NA |
P=>S
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 2.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 90.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.06% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 2.57% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
412 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGG=>UGG
NA=>NA |
R=>W
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 42.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 92.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.33% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 50.29% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
422 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
CCC=>CUC |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 3.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
440 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 89.84% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 83.15% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
474 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CUC=>CUU
NA=>NA |
L=>L
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 32.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 62.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 68.51% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 40.82% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
505 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CAU=>UAU
NA=>NA |
H=>Y
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 89.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.21% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.37% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
530 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 75.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 92.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.21% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.40% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
538 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA=>UCA
NA=>NA |
P=>S
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 6.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 93.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.61% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 9.50% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
552 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 19.08% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 17.91% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
581 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA=>CUA
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 36.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 66.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 74.08% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 58.24% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
586 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA/CCA=>UCA/UUA
NA=>NA |
P=>S/L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 14.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 38.00% | Low | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 36.89% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 15.72% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
587 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA/CCA=>CUA/UUA
NA=>NA |
P=>L/L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 62.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 90.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.65% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 84.42% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
59 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.08% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 87.58% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
643 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG=>UCG
NA=>NA |
P=>S
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 3.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 80.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.66% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 4.64% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
649 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.04% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 75.37% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
665 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCC/UCC=>UUC/UUU
NA=>NA |
S=>F/F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 13.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 85.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.08% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 21.79% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
666 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCC/UCC=>UCU/UUU
NA=>NA |
S=>S/F
NA=>NA |
Synonymous/Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 2.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 62.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 72.48% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 4.18% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
693 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
AUC=>AUU
NA=>NA |
I=>I
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 2.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 81.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 89.34% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.29% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
700 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGU=>UGU
NA=>NA |
R=>C
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 82.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 97.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.05% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 83.13% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
705 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UUC=>UUU
NA=>NA |
F=>F
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 18.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 67.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 68.68% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 18.02% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
746 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 4.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 92.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.36% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 4.65% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
mttB
|
97 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 80.81% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 77.38% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
167 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.65% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.89% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
2 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
ACG=>AUG |
T=>M |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 7.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 84.00% | High | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
265 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGG=>UGG
NA=>NA |
R=>W
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 15.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.05% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 11.81% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
307 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG/CCG=>UCG/UUG
NA=>NA |
P=>S/L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 82.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.80% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 67.56% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
308 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG/CCG=>CUG/UUG
NA=>NA |
P=>L/L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 62.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 97.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.21% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 45.45% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
376 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGG=>UGG
NA=>NA |
R=>W
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 89.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.72% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 61.95% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
40 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
CUA=>UUA |
L=>L |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 2.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 42.00% | Medium | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
49 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
CUA=>UUA |
L=>L |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 64.00% | High | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 22.00% | Low | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
490 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCC/CCC=>UCC/UCU
NA=>NA |
P=>S/S
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 94.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.72% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.47% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
492 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCC/CCC=>CCU/UCU
NA=>NA |
P=>P/S
NA=>NA |
Synonymous/Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 92.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.20% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.79% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
493 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGU=>UGU
NA=>NA |
R=>C
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 92.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.75% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.48% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
500 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 89.58% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.80% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
536 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 94.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.07% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.03% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
571 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.59% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.37% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
580 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGU=>UGU
NA=>NA |
R=>C
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 64.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.12% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 64.28% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
635 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.65% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 84.39% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
674 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 49.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 56.61% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.72% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
743 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA=>CUA
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 4.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 93.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 89.04% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 4.14% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
755 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG=>CUG
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 49.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 94.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 87.24% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 23.30% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
823 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.59% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.15% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
898 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGG=>UGG
NA=>NA |
R=>W
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 5.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 97.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.00% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 5.00% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
928 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
CGG=>UGG |
R=>W |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 4.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 95.00% | High | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad1
|
937 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU=>UCU
NA=>NA |
P=>S
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 87.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 96.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.41% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.75% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
1091 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 95.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.28% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.93% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
1160 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 95.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.33% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.37% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
1233 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 10.73% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 17.37% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
1279 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA/CCA=>UCA/UUA
NA=>NA |
P=>S/L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 88.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 97.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.18% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.71% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
1280 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA/CCA=>CUA/UUA
NA=>NA |
P=>L/L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 92.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.29% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.90% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
1309 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGU=>UGU
NA=>NA |
R=>C
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 56.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.13% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 56.49% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
1433 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.00% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.61% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
1436 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.23% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.47% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
1490 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.40% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.72% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
28 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA=>UCA
NA=>NA |
P=>S
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 75.00% | High | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 64.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 63.96% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 74.91% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
285 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.21% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 9.90% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
341 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.07% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 80.08% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
344 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.81% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.91% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
389 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.73% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.41% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
394 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.67% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 8.66% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
400 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.77% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.82% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
427 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.85% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.50% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
461 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.75% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 45.99% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
530 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.10% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 11.22% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
558 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 50.57% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 60.81% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
59 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCC=>UUC
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 20.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.41% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 20.30% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
642 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 14.71% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 19.63% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
695 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 95.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.73% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.60% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
821 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 97.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.26% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.01% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
842 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.47% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.98% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
89 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCC/UCC=>UUC/UUU
NA=>NA |
S=>F/F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 91.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.24% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.90% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
90 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 85.33% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 76.76% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
953 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU=>CUU
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 94.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.55% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.00% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
961 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CAU=>UAU
NA=>NA |
H=>Y
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 96.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.91% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.12% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
991 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.08% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.39% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad2
|
995 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
ACU=>AUU
NA=>NA |
T=>I
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 96.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.72% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.19% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad3
|
149 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 75.77% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 72.57% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad3
|
211 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU/CCU=>UCU/UUU
NA=>NA |
P=>S/F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 10.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 83.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.87% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 12.57% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad3
|
212 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU/CCU=>CUU/UUU
NA=>NA |
P=>L/F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 10.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 83.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 87.10% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 11.90% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad3
|
250 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU=>UCU
NA=>NA |
P=>S
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 14.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 85.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 84.78% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 14.48% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad3
|
254 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCC=>CUC
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 65.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 84.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 83.72% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 68.03% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad3
|
26 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 9.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 85.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.39% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 6.42% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad3
|
347 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 88.30% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 79.26% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad3
|
352 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGG=>UGG
NA=>NA |
R=>W
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 35.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 87.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 85.22% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 35.49% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad3
|
64 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.01% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 83.80% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad3
|
8 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 5.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 66.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.69% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 24.47% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad3
|
83 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.25% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 79.02% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
1010 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.97% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.57% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
1033 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.67% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.59% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
107 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.08% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.71% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
1101 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UAC=>UAU
NA=>NA |
Y=>Y
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 97.00% | High | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 91.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 87.77% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.49% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
1129 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CUC/CUC=>UUC/UUU
NA=>NA |
L=>F/F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 65.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.89% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 47.76% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
1131 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CUC/CUC=>CUU/UUU
NA=>NA |
L=>L/F
NA=>NA |
Synonymous/Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 1.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 10.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 13.26% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 1.55% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
1148 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 98.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.76% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.78% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
1172 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.91% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.49% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
1194 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
AUC=>AUU |
I=>I |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 8.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 23.00% | Low | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
1206 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 23.62% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 15.54% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
124 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.94% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.72% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
1355 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 100.00% | Complete | NA | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.74% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.93% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
1373 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.11% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.24% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
1401 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 25.67% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 30.10% | Low | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
1405 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGG=>UGG
NA=>NA |
R=>W
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 64.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 90.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.15% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.65% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
1417 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.81% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.84% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
1433 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.23% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.47% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
158 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.09% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 30.86% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
164 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.94% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 89.36% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
166 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.55% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.50% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
197 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.42% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.48% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
29 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.07% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.96% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
317 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.98% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.46% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
362 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.25% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.95% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
376 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.58% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 28.41% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
403 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.56% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.76% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
418 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CUA=>UUA
NA=>NA |
L=>L
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 3.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 2.50% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 0.08% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
436 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.61% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.70% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
437 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCC=>CUC
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 75.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.98% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 71.13% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
449 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA=>CUA
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 26.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.37% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 25.67% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
608 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.34% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.55% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
636 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
CGC=>CGU |
R=>R |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 1.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 9.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
659 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 98.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.30% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.93% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
74 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.82% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 79.91% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
747 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCC=>UCU
NA=>NA |
S=>S
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 2.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 1.39% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 0.08% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
753 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
AUC=>AUU |
I=>I |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 11.00% | Poor | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 6.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
767 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.56% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.12% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
784 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CAC=>UAC
NA=>NA |
H=>Y
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 99.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.51% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.20% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
836 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 98.00% | High | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 95.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.23% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.85% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
84 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 24.69% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 27.03% | Low | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
896 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.58% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.55% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4
|
977 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG=>CUG
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 43.00% | Medium | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 84.05% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.31% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4L
|
100 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.04% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 84.64% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4L
|
110 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 22.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 93.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.72% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 22.31% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4L
|
131 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.62% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.27% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4L
|
158 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.46% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.91% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4L
|
188 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.16% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.37% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4L
|
197 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.47% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.28% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4L
|
41 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.53% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.75% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4L
|
55 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGG=>UGG
NA=>NA |
R=>W
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 13.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 94.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.28% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 12.59% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4L
|
86 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCU=>CUU
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 71.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 90.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.01% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 70.73% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad4L
|
95 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.73% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.17% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
1490 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCC=>CUC
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 96.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.81% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.38% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
1550 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
ACC=>AUC
NA=>NA |
T=>I
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 96.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.57% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.55% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
1580 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 39.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 94.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.88% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 39.06% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
1610 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCC=>CUC
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 96.00% | High | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 92.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.95% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.65% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
1665 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CUC=>CUU
NA=>NA |
L=>L
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 1.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 8.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 8.15% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 0.67% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
1731 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UUC=>UUU
NA=>NA |
F=>F
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 8.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 18.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 17.60% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 8.14% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
1895 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.01% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.55% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
1916 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 35.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.62% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 34.90% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
1918 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGU=>UGU
NA=>NA |
R=>C
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 97.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.75% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.18% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
1929 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
GAC=>GAU
NA=>NA |
D=>D
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 5.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 5.17% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 0.12% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
1933 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
CUA=>UUA |
L=>L |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 3.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
1958 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 3.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 92.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.07% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 2.56% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
242 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG=>CUG
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 4.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.43% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.26% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
272 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCC=>UUC
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 51.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.83% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 43.60% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
358 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.41% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.42% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
374 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA=>CUA
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 80.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.89% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 46.04% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
398 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 33.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.30% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 23.15% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
494 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.27% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.17% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
548 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.65% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.74% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
553 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGU=>UGU
NA=>NA |
R=>C
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 71.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.78% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 61.01% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
598 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGU=>UGU
NA=>NA |
R=>C
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 32.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.09% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 17.77% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
608 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
GCC/GCC=>GUC/GUU
NA=>NA |
A=>V/V
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 35.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.14% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 22.33% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
609 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
GCC/GCC=>GCU/GUU
NA=>NA |
A=>A/V
NA=>NA |
Synonymous/Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 13.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 87.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.81% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 9.07% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
629 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.65% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.12% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
676 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CUU=>UUU
NA=>NA |
L=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 98.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.38% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.27% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
713 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 63.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.42% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 55.56% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
725 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.44% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.18% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
764 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.20% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.44% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
801 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 41.77% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 38.71% | Low | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
835 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA=>UCA
NA=>NA |
P=>S
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 97.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.50% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.09% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
863 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 65.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.81% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 62.90% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
875 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
ACG=>AUG
NA=>NA |
T=>M
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 95.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.69% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.48% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
NA |
Intron |
TAIR (v10) |
TAIR (v10) |
Genomic position |
141966 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 3.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 40.00% | Medium | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad5
|
NA |
Intron |
EnsemblGenomes (release 39) |
BK010421 |
Genomic position |
235403 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.85% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 83.18% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad6
|
103 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGC=>UGC
NA=>NA |
R=>C
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 7.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.34% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 4.49% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad6
|
161 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.37% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.04% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad6
|
169 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CAU=>UAU
NA=>NA |
H=>Y
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 81.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.45% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 68.49% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad6
|
191 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.04% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.00% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad6
|
26 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.30% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.84% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad6
|
446 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.16% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.40% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad6
|
463 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.62% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.57% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad6
|
53 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.45% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.02% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad6
|
88 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCC/CCC/CCC/CCC=>UCC/UUC/UCU/UUU
NA=>NA |
P=>S/F/S/F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 41.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 100.00% | Complete | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.18% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 20.00% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad6
|
89 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCC/CCC/CCC/CCC=>CUC/UUC/CUU/UUU
NA=>NA |
P=>L/F/L/F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 29.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.32% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 14.60% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad6
|
90 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
CCC/CCC/CCC/CCC=>CCU/UCU/CUU/UUU |
P=>S/F/S/F |
Synonymous/Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 1.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 4.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad6
|
95 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.01% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.91% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad6
|
NA |
5'UTR |
TAIR (v10) |
TAIR (v10) |
NA |
-1 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 14.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 27.00% | Low | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad6
|
NA |
5'UTR |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
-73 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 3.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 84.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 81.48% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 2.60% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
1050 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCC=>CCU
NA=>NA |
P=>P
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 8.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 18.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 16.02% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 6.89% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
1057 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGU=>UGU
NA=>NA |
R=>C
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 98.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.15% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.91% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
1079 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 45.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.46% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 45.73% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
1083 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
GCC=>GCU |
A=>A |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 1.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
1088 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 82.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 97.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.44% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 82.02% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
1103 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 40.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.88% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 40.27% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
1124 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA=>CUA
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 96.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.88% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.07% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
1137 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
GUC=>GUU
NA=>NA |
V=>V
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 46.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 62.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 63.29% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 48.17% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
137 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.39% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.99% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
200 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.60% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.83% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
209 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 59.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 91.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.97% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 59.03% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
213 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.31% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 8.83% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
24 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.81% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.41% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
244 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.95% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.58% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
251 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.37% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.19% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
316 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.43% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 62.73% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
335 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.94% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.50% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
344 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.51% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 2.54% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
38 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.29% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 4.44% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
578 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.83% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.50% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
679 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.69% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 88.24% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
698 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 79.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 92.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.44% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 79.19% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
724 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CAU=>UAU
NA=>NA |
H=>Y
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 95.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.12% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.50% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
734 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 98.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.45% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.32% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
739 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CUU=>UUU
NA=>NA |
L=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 5.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 97.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.82% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 4.67% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
769 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGC=>UGC
NA=>NA |
R=>C
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 16.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.87% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 16.05% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
77 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.79% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.60% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
783 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
UAC=>UAU |
Y=>Y |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 1.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 7.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
789 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
AUC=>AUU
NA=>NA |
I=>I
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 15.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 14.65% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 0.20% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
795 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 78.92% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 84.91% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
926 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.15% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.74% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
963 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.61% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.80% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
NA |
5'UTR |
EnsemblGenomes (release 39) |
BK010421 |
NA |
-39 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 37.78% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 62.47% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad7
|
NA |
Intron |
EnsemblGenomes (release 39) |
BK010421 |
Genomic position |
243100 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.43% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.47% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad9
|
167 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 95.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.99% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.19% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad9
|
190 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CAU=>UAU
NA=>NA |
H=>Y
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 59.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.11% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 58.77% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad9
|
298 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG=>UCG
NA=>NA |
P=>S
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 88.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.02% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 88.27% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad9
|
328 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGG=>UGG
NA=>NA |
R=>W
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 28.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.89% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 27.96% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad9
|
372 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
AUC=>AUU |
I=>I |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 4.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad9
|
398 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 94.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.30% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.98% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad9
|
439 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CUU=>UUU
NA=>NA |
L=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 77.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.66% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 76.73% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad9
|
517 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
CAA=>UAA |
Q=>Stop codon |
Nonsense |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 1.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
nad9
|
92 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 88.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 98.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.04% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 88.16% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhB
|
1255 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.44% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.62% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhB
|
1481 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.55% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.78% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhB
|
149 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.65% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.49% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhB
|
467 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 87.52% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.43% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhB
|
586 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CAU=>UAU
NA=>NA |
H=>Y
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 2.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 89.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 89.12% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 1.85% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhB
|
708 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
AUC=>AUU |
I=>I |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 11.00% | Poor | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 3.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhB
|
726 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
UUC=>UUU |
F=>F |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 4.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhB
|
746 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.52% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.99% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhB
|
830 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.54% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.54% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhB
|
836 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 87.20% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 89.52% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhB
|
872 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 84.33% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.72% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhD
|
2 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 32.97% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 27.04% | Low | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhD
|
383 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 7.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 97.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.67% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 7.00% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhD
|
674 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.13% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.06% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhD
|
878 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 83.91% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 78.04% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhD
|
887 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 82.87% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 82.89% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhF
|
290 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.13% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.54% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ndhG
|
50 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 77.56% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.57% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
orf240A
|
199 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 63.63% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 6.46% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
petL
|
5 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.78% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.96% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
psbE
|
214 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.53% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 99.66% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
psbF
|
77 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.52% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.24% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
psbZ
|
50 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.44% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.25% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
pseudo-rps14
|
194 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCC=>UUC
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 79.00% | High | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 65.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 66.06% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 80.02% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
pseudo-rps14
|
99 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCC=>CCU
NA=>NA |
P=>P
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 38.00% | Low | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 14.00% | Poor | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 15.45% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 42.86% | Medium | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl16
|
209 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.57% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.61% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl16
|
34 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 79.72% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 6.84% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl16
|
426 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
UCC=>UCU |
S=>S |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 24.00% | Low | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 8.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl16
|
43 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 6.55% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.15% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl16
|
440 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA=>CUA
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 53.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 99.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.55% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 53.03% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl16
|
506 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.81% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 94.40% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl16
|
512 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 98.74% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.27% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl16
|
61 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.72% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 85.44% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl16
|
NA |
3'UTR |
TAIR (v10) |
TAIR (v10) |
NA |
1 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 3.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl16
|
NA |
3'UTR |
TAIR (v10) |
TAIR (v10) |
NA |
275 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 2.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl16
|
NA |
3'UTR |
EnsemblGenomes (release 39) |
BK010421 |
NA |
327 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 63.01% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 66.46% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl16
|
NA |
3'UTR |
EnsemblGenomes (release 39) |
BK010421 |
NA |
391 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 33.76% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 33.90% | Low | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl2
|
212 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 46.93% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 55.45% | Medium | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl2
|
292 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 4.73% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.82% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl2
|
711 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 10.50% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.26% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
rpl23
|
89 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 21.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 74.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 74.09% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 21.34% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl5
|
121 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 2.14% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.00% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl5
|
169 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGC=>UGC
NA=>NA |
R=>C
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 10.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 87.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 89.09% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 10.93% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl5
|
317 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 12.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 82.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 88.59% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 16.49% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl5
|
329 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 97.31% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.61% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl5
|
35 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 78.15% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 65.44% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl5
|
47 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG=>CUG
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 25.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 68.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 72.72% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 28.61% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl5
|
512 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA=>CUA
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 29.00% | Low | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 88.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 89.48% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 34.89% | Low | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl5
|
58 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG/CCG=>UCG/UUG
NA=>NA |
P=>S/L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 1.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 40.00% | Medium | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 40.28% | Medium | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 0.81% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl5
|
59 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG/CCG=>CUG/UUG
NA=>NA |
P=>L/L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 3.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 70.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 72.35% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 2.90% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl5
|
64 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 60.65% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 55.80% | Medium | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rpl5
|
92 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 78.32% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 74.94% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
rpoA
|
200 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 1.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 76.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 75.94% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 0.82% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
rpoB
|
2432 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 81.89% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.71% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
rpoB
|
338 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 95.00% | High | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 76.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 76.41% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 95.10% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
rpoB
|
551 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 82.62% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.33% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
rpoC1
|
488 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 58.00% | Medium | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 21.00% | Low | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 20.79% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 58.07% | Medium | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps12
|
104 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.13% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 85.37% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps12
|
146 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.04% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.73% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps12
|
159 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
GCC=>GCU |
A=>A |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 4.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps12
|
196 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.02% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 85.68% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps12
|
221 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 87.40% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 78.87% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps12
|
269 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 88.78% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 83.04% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps12
|
284 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 87.76% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 83.88% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps12
|
285 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 80.63% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 77.76% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps12
|
328 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
CGA=>UGA |
R=>Stop codon |
Nonsense |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 2.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps12
|
84 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 82.78% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 72.09% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
rps12
|
NA |
Intron |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
Genomic position |
69553 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 57.00% | Medium | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 26.00% | Low | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 25.74% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 56.99% | Medium | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
rps14
|
194 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.63% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.62% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
rps14
|
80 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 96.71% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.26% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps3
|
126 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 2.39% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 1.19% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps3
|
1260 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 6.28% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 8.39% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps3
|
1344 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
AGC=>AGU
NA=>NA |
S=>S
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 27.00% | Low | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 27.04% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 0.21% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps3
|
1352 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG=>CUG
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 3.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 90.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.60% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.13% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps3
|
1470 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCC=>UCU
NA=>NA |
S=>S
NA=>NA |
Synonymous
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 1.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 75.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 75.14% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 0.58% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps3
|
1534 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 64.98% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 51.93% | Medium | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps3
|
187 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.98% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 5.43% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps3
|
210 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
UUC=>UUU |
F=>F |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 1.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 4.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps3
|
515 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 1.79% | Poor | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 2.49% | Poor | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps3
|
603 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 70.59% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 72.35% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps3
|
64 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
CGG=>UGG |
R=>W |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 4.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 54.00% | Medium | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps3
|
887 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 77.32% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 78.17% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
1042 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 74.47% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 69.63% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
1043 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 71.71% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 69.94% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
1052 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 78.36% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 81.03% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
1057 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 75.76% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 81.23% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
175 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 74.26% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 85.69% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
226 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 90.50% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 93.73% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
235 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CAU=>UAU
NA=>NA |
H=>Y
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 72.00% | High | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 86.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 86.88% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 71.50% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
299 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 84.60% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 91.79% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
308 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCA=>CUA
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 88.00% | High | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 72.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 76.27% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 88.15% | High | Increased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
332 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG=>CUG
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 2.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 80.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 82.49% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 2.43% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
377 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CCG=>CUG
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 3.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 86.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 87.31% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 3.64% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
441 |
CDS |
TAIR (v10) |
TAIR (v10) |
NA |
NA |
C-to-U |
UCC=>UCU |
S=>S |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 6.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
524 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 89.69% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.16% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
77 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 1.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 79.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 78.78% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 0.88% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
88 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
CGG=>UGG
NA=>NA |
R=>W
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 3.00% | Poor | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 80.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 80.55% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 2.89% | Poor | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
956 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 89.40% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.10% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
967 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 85.63% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 89.86% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps4
|
992 |
CDS |
TAIR (v10)
EnsemblGenomes (release 39) |
TAIR (v10)
BK010421 |
NA |
NA |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 54.00% | Medium | Decreased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 85.00% | High | None | 28760958 | | Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 92.63% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 69.45% | High | Decreased | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
rps4
|
NA |
UTR |
TAIR (v10) |
TAIR (v10) |
Genomic position |
45095 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 12.00% | Poor | Increased | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 3.00% | Poor | None | 28760958 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps7
|
332 |
CDS |
EnsemblGenomes (release 39) |
BK010421 |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 87.14% | High | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 83.26% | High | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Mitochondrion |
rps7
|
NA |
5'UTR |
EnsemblGenomes (release 39) |
BK010421 |
NA |
-217 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col-0 | WT | Control | Control | No mutant | NA | NA | NA | RNA-seq | 33.88% | Low | None | 32098170 | | Col-0 | dyw2 | Control | Control | No mutant | NA | NA | NA | RNA-seq | 30.98% | Low | Similar | 32098170 |
|
| Arabidopsis thaliana |
AT2G15690 |
Plastid |
ycf3
|
NA |
Intron |
TAIR (v10) |
TAIR (v10) |
Genomic position |
43350 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| GK_332A07 | dyw2-1 | T-DNA Insertion | T-DNA is inserted in +1109 bp | Homozygous | Be affected in early embryogenesis and endosperm development | NA | NA | Total RNA-seq analysis | 0.00% | Unedited | Absent | 28760958 | | GK_332A07 | Controls (CT) - dyw2-1 | Control | Siblings of dyw2-1 homozygous mutant plants coming from the same self-progeny | No mutant | Normal | NA | NA | Total RNA-seq analysis | 10.00% | Poor | None | 28760958 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
atpA
|
1148 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | Similar | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | Similar | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
matK
|
1258 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 72.00% | High | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
ndhA
|
1070 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
ndhA
|
473 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
ndhA
|
563 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
ndhB
|
1481 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | Similar | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | Similar | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
ndhB
|
467 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | Similar | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | Similar | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
ndhB
|
586 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
ndhB
|
611 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
ndhB
|
704 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | Similar | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | Similar | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
ndhB
|
737 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 58.00% | Medium | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
ndhB
|
830 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 71.00% | High | Decreased | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 45.00% | Medium | Decreased | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
ndhB
|
836 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | Similar | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | Similar | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
ndhD
|
878 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 88.00% | High | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 31.00% | Low | Decreased | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 26.00% | Low | Decreased | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
ndhF
|
62 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 89.00% | High | Decreased | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 95.00% | High | Similar | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
ndhG
|
10 |
5'UTR |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 24.00% | Low | Decreased | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 18.00% | Poor | Decreased | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
ndhG
|
347 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 69.00% | High | Decreased | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 66.00% | High | Decreased | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
rpl2
|
2 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 77.00% | High | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 28.00% | Low | Decreased | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 36.00% | Low | Decreased | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
rpoB
|
467 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 39.00% | Low | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 38.00% | Low | Similar | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 54.00% | Medium | Increased | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
rpoB
|
545 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 61.00% | High | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 84.00% | High | Increased | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 74.00% | High | Increased | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
rpoB
|
560 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 72.00% | High | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 79.00% | High | Similar | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 86.00% | High | Increased | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
rpoC2
|
4106 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 91.00% | High | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
rps14
|
80 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 49.00% | Medium | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 0.00% | Unedited | Absent | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
rps2
|
134 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 80.00% | High | Decreased | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 81.00% | High | Decreased | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
rps8
|
182 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 95.00% | High | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 85.00% | High | Similar | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 88.00% | High | Similar | 41246891 |
|
| Oryza sativa |
LOC_Os03g55840 |
Chloroplast |
ycf3
|
185 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Zhonghua 11 | ZH11 (35 degrees Celsius) | Grown under high-temperature conditions | Grown under high-temperature conditions (35 degrees Celsius) | No mutant | Normal | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 100.00% | Complete | None | 41246891 | | NA | osdyw2-1 (35 degrees Celsius) | A single thymine insertion | A single thymine insertion at the guide RNA target site within the LOC_Os03g55840 gene | Homozygous | Pale-yellow leaves, displaying a high-temperature-sensitive albino lethal phenotype | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 84.00% | High | Decreased | 41246891 | | NA | osdyw2-2 (35 degrees Celsius) | A single cytosine deletion | A single cytosine deletion, which also causes a frameshift and premature translation termination | Homozygous | Albino lethal seedlings phenotype with pale-yellow leaves and reduced Chl contents | Leaf | Third-leaf-stage | RT-PCR products were directly sequenced | 80.00% | High | Decreased | 41246891 |
|
