| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
ccmB
|
406 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
CUG=>UUG |
L=>L |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 24.00% | Low | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 26.00% | Low | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
ccmB
|
80 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
UCG=>UUG |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 47.00% | Medium | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 71.00% | High | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
ccmC
|
184 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
CGG=>UGG |
R=>W |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 76.00% | High | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 71.00% | High | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
ccmC
|
270 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
UCC=>UCU |
S=>S |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 6.00% | Poor | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 8.00% | Poor | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
ccmC
|
463 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
CGU=>UGU |
R=>C |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 79.00% | High | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 83.00% | High | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
ccmC
|
618 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
ACC=>ACU |
T=>T |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 71.00% | High | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 70.00% | High | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
ccmFc
|
1215 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
ACC=>ACU |
T=>T |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 52.00% | Medium | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 60.00% | High | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
ccmFc
|
315 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
UUC=>UUU |
F=>F |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 0.00% | Unedited | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 1.00% | Poor | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
ccmFc
|
406 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
CGU=>UGU |
R=>C |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 53.00% | Medium | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 74.00% | High | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
cob
|
114 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
UUC=>UUU |
F=>F |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 1.00% | Poor | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 2.00% | Poor | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
mttB
|
59 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
UCG=>UUG |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 77.00% | High | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 79.00% | High | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
nad2
|
336 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
UUC=>UUU |
F=>F |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 1.00% | Poor | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 1.00% | Poor | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
nad3
|
26 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
UCU=>UUU |
S=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 78.00% | High | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 79.00% | High | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
nad4
|
1101 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
UAC=>UAU |
Y=>Y |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 57.00% | Medium | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 59.00% | Medium | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
nad4
|
1131 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
CUC/CUC=>CUU/UUU |
L=>L/F |
Synonymous/Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 2.00% | Poor | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 4.00% | Poor | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
nad4
|
1194 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
AUC=>AUU |
I=>I |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 5.00% | Poor | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 6.00% | Poor | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
nad5
|
1494 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
CUC=>CUU |
L=>L |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 1.00% | Poor | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 1.00% | Poor | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
nad5
|
1933 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
CUA=>UUA |
L=>L |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 1.00% | Poor | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 1.00% | Poor | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
nad5
|
NA |
Intron |
NA |
NA |
Genomic position |
141966 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 7.00% | Poor | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 18.00% | Poor | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
nad6
|
NA |
5'UTR |
NA |
NA |
NA |
-73 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 60.00% | High | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
nad6
|
NA |
5'UTR |
NA |
NA |
NA |
73 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 40.00% | Medium | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
nad7
|
213 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
GAC=>GAU |
D=>D |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 78.00% | High | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 86.00% | High | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
nad7
|
795 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
AUC=>AUU |
I=>I |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 26.00% | Low | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 39.00% | Low | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
nad7
|
963 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
UCC=>UCU |
S=>S |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 57.00% | Medium | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 85.00% | High | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
nad7
|
NA |
Intron |
NA |
NA |
Genomic position |
134282 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 1.00% | Poor | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 2.00% | Poor | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
nad7
|
NA |
Intron |
NA |
NA |
Genomic position |
134309 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 76.00% | High | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 86.00% | High | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
nad9
|
517 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
CAA=>UAA |
Q=>Stop codon |
Nonsense |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 3.00% | Poor | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 2.00% | Poor | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
orf114
|
327 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
UUC=>UUU |
F=>F |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 45.00% | Medium | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 44.00% | Medium | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
pseudo-rps14
|
99 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
CCC=>CCU |
P=>P |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 4.00% | Poor | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 7.00% | Poor | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
rpl16
|
NA |
3'UTR |
NA |
NA |
NA |
72 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus-induced gene silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 0.00% | Unedited | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 2.00% | Poor | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
rpl5
|
59 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
CCG/CCG=>CUG/UUG |
P=>L/L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 46.00% | Medium | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 70.00% | High | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
rps12
|
328 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
CGA=>UGA |
R=>Stop codon |
Nonsense |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 0.00% | Unedited | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 1.00% | Poor | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
rps3
|
1344 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
AGC=>AGU |
S=>S |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 14.00% | Poor | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 17.00% | Poor | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
rps3
|
270 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
CCC=>CCU |
P=>P |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 1.00% | Poor | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 1.00% | Poor | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
rps4
|
711 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
UCC=>UCU |
S=>S |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 3.00% | Poor | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 3.00% | Poor | Decreased | 25800738 |
|
| Arabidopsis thaliana |
AT5G54580 |
Mitochondrion |
rps7
|
NA |
5'UTR |
NA |
NA |
NA |
-217 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | ORRM2 sil_1 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 11.00% | Poor | Decreased | 25800738 | | NA | ORRM2 sil_2 | Virus Induced Gene Silencing (VIGS) | NA | NA | No macroscopic phenotypic | Leaf | 5 weeks | STS-PCRseq | 13.00% | Poor | Decreased | 25800738 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
atp4
|
171 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
49205 |
C-to-U |
NA=>NA |
F=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 9.29% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 15.20% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
atp6
|
606 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
425738 |
C-to-U |
NA=>NA |
F=>F |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 43.74% | Medium | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 55.29% | Medium | Increased | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
atp8
|
249 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
56948 |
C-to-U |
NA=>NA |
F=>F |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 8.93% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 10.75% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
atp8
|
30 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
56729 |
C-to-U |
NA=>NA |
F=>F |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 38.97% | Low | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 34.68% | Low | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
atp9
|
229 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
409839 |
C-to-U |
NA=>NA |
R=>S |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 9.46% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 5.29% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
atp9
|
81 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
235336 |
C-to-U |
NA=>NA |
V=>V |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 36.73% | Low | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 32.74% | Low | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
atp9
|
81 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
409987 |
C-to-U |
NA=>NA |
V=>V |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 84.20% | High | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 75.10% | High | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
ccmB
|
338 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
204832 |
C-to-U |
NA=>NA |
P=>Q |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 16.96% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 13.82% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
ccmB
|
569 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
204601 |
C-to-U |
NA=>NA |
S=>Y |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 7.86% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 5.60% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
ccmB
|
87 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
205083 |
C-to-U |
NA=>NA |
I=>I |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 5.07% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 3.03% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
ccmFc
|
1160 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
102187 |
C-to-U |
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 30.25% | Low | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 26.77% | Low | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
ccmFc
|
1239 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
102266 |
C-to-U |
NA=>NA |
I=>I |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 9.87% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 7.34% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
ccmFc
|
406 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
100484 |
C-to-U |
NA=>NA |
R=>C |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 19.99% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 16.41% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
ccmFc
|
52 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
100130 |
C-to-U |
NA=>NA |
R=>C |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 16.38% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 13.43% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
ccmFc
|
707 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
100785 |
C-to-U |
NA=>NA |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 22.53% | Low | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 19.24% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
cob
|
53 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
74624 |
C-to-U |
NA=>NA |
T=>I |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 53.71% | Medium | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 47.42% | Medium | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
cox1
|
1433 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
316820 |
C-to-U |
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 72.35% | High | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 79.94% | High | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
cox1
|
1489 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
316876 |
C-to-U |
NA=>NA |
P=>S |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 69.10% | High | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 76.82% | High | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
cox1
|
15 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
315402 |
C-to-U |
NA=>NA |
V=>V |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 34.71% | Low | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 42.67% | Medium | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
cox1
|
590 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
315977 |
C-to-U |
NA=>NA |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 67.93% | High | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 74.81% | High | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
cox1
|
761 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
316148 |
C-to-U |
NA=>NA |
S=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 67.20% | High | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 74.23% | High | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
mttB
|
592 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
171871 |
C-to-U |
NA=>NA |
R=>C |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 7.46% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 5.56% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
nad4
|
1152 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
310858 |
C-to-U |
NA=>NA |
S=>S |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 26.77% | Low | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 29.99% | Low | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
nad4
|
261 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
305425 |
C-to-U |
NA=>NA |
D=>D |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 20.71% | Low | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 15.60% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
nad4
|
74 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
305238 |
C-to-U |
NA=>NA |
T=>I |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 30.54% | Low | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 23.89% | Low | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
nad4
|
837 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
307412 |
C-to-U |
NA=>NA |
S=>S |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 11.88% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 15.70% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
nad4
|
952 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
307527 |
C-to-U |
NA=>NA |
L=>L |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 16.99% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 20.84% | Low | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
nad6
|
569 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
290822 |
C-to-U |
NA=>NA |
S=>Y |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 38.33% | Low | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 45.01% | Medium | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
nad7
|
24 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
358231 |
C-to-U |
NA=>NA |
I=>I |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 9.01% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 12.57% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
nad9
|
567 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
215429 |
C-to-U |
NA=>NA |
D=>D |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 5.63% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 3.51% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
nad9
|
92 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
214954 |
C-to-U |
NA=>NA |
S=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 40.02% | Medium | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 34.10% | Low | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
rpl5
|
47 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
42591 |
C-to-U |
NA=>NA |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 56.15% | Medium | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 47.72% | Medium | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
rpl5
|
503 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
43047 |
C-to-U |
NA=>NA |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 62.01% | High | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 54.51% | Medium | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
rpl5
|
506 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
43050 |
C-to-U |
NA=>NA |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 61.24% | High | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 54.54% | Medium | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
rpl5
|
59 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
42603 |
C-to-U |
NA=>NA |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 56.70% | Medium | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 48.50% | Medium | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
rpl5
|
92 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
42636 |
C-to-U |
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 56.20% | Medium | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 49.29% | Medium | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
rps10
|
302 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
315164 |
C-to-U |
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 61.38% | High | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 52.67% | Medium | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
rps10
|
43 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
314130 |
C-to-U |
NA=>NA |
P=>S |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 15.06% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 12.35% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
rps13
|
100 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
375537 |
C-to-U |
NA=>NA |
R=>S |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 41.95% | Medium | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 33.18% | Low | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
rps13
|
287 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
375350 |
C-to-U |
NA=>NA |
S=>Stop codon |
Nonsense |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 59.30% | Medium | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 53.21% | Medium | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
rps13
|
60 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
375577 |
C-to-U |
NA=>NA |
T=>T |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 16.11% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 19.41% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
rps4
|
917 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
292218 |
C-to-U |
NA=>NA |
S=>Stop codon |
Nonsense |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 11.85% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 8.56% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
sdh3
|
235 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
221400 |
C-to-U |
NA=>NA |
L=>M |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 6.21% | Poor | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 3.42% | Poor | Similar | 38668628 |
|
| Solanum lycopersicum |
Solyc07g063900 |
Mitochondrion |
sdh4
|
353 |
CDS |
https://solgenomics.net |
NC_035963.1 |
Genomic region |
58880 |
C-to-U |
NA=>NA |
S=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| S. lycopersicum cv. Micro-Tom | WT | Control | Control | No mutant | Normal | Style | 5 DAP | Strand-specific RNA-Seq | 44.54% | Medium | None | 38668628 | | NA | CR-slorrm2 | CRISPR/Cas9-mediated gene editing | A 9 bp deletion in both alleles | Knockout | The styles near the ovary of the CR-slorrm2 mutant on the day of pollination had much fewer glandular hairs compared to those of the WT; Scanning electron microscopy (SEM) images of the style and ovary of WT and CR-slorrm2, further showed the reduced trichomes in the styles of CR-slorrm2; Many of the cells of the style in the WT plants displayed a “funiculose” morphology, whereas only the cells of CR-slorrm2 style that were adjacent to the stigma differentiated into a funiculose cells; A noticeable displacement of the “separation zone” between the style and ovary in the CR-slorrm2 mutant, with the style being shifted away from the ovary | Style | 5 DAP | Strand-specific RNA-Seq | 49.82% | Medium | Similar | 38668628 |
|
