Nicotiana sylvestris; Nicotiana sylvestris CCMP2878 - Plant Editosome Database - BIG Data Center

Summary

Species: Nicotiana sylvestris; Nicotiana sylvestris CCMP2878
NCBI Taxonomy: 4096
Organelle:Chloroplast (NC_007500.1)
Edited Genes:16
Editing Events:66
Gene Editing Events Genomic Position Region Strand RNA Type Codons Amino Acids
atpA211361
11361
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
CCC=>CUC
CCC=>CUC
P=>L
P=>L
atpF212669
12669
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
CCA=>CUA
CCA=>CUA
P=>L
P=>L
ndhA4121713
122445
122445
121713
CDS
CDS
CDS
CDS
-
-
-
-
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
UCC=>UUC
UCA=>UUA
UCA=>UUA
UCC=>UUC
S=>F
S=>L
S=>L
S=>F
ndhB18143994
143349
143343
143259
143250
143124
143099
142980
142662
142662
142980
143099
143994
143349
143343
143259
143250
143124
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCA=>CUA
UCA=>UUA
UCA=>UUA
UCU=>UUU
CCA=>CUA
UCA=>UUA
CAU=>UAU
CCA=>CUA
UCA=>UUA
UCA=>UUA
CCA=>CUA
CAU=>UAU
CCA=>CUA
UCA=>UUA
UCA=>UUA
UCU=>UUU
CCA=>CUA
UCA=>UUA
P=>L
S=>L
S=>L
S=>F
P=>L
S=>L
H=>Y
P=>L
S=>L
S=>L
P=>L
H=>Y
P=>L
S=>L
S=>L
S=>F
P=>L
S=>L
ndhD8118643
119024
118427
118352
118352
118427
118643
119024
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
ACG=>AUG
UCA=>UUA
UCG=>UUG
UCG=>UUG
UCA=>UUA
UCA=>UUA
ACG=>AUG
S=>L
T=>M
S=>L
S=>L
S=>L
S=>L
S=>L
T=>M
ndhF2114003
114003
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
S=>L
S=>L
petB278817
78817
CDS
CDS
+
+
mRNA
mRNA
C-to-U
C-to-U
CCA=>CUA
CCA=>CUA
P=>L
P=>L
psbE266919
66919
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
CCA=>UCA
CCA=>UCA
P=>S
P=>S
psbL266728
66728
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
ACG=>AUG
ACG=>AUG
T=>M
T=>M
rpl20271105
71105
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
S=>L
S=>L
rpoA280640
80640
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
S=>L
S=>L
rpoB827042
27177
25515
26964
25515
26964
27042
27177
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCU=>UUU
UCU=>UUU
UCA=>UUA
UCU=>UUU
UCA=>UUA
UCA=>UUA
UCU=>UUU
S=>L
S=>F
S=>F
S=>L
S=>F
S=>L
S=>L
S=>F
rpoC1223498
23498
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
S=>L
S=>L
rpoC2217592
17592
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
S=>L
S=>L
rps14438804
38735
38804
38735
CDS
CDS
CDS
CDS
-
-
-
-
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCA=>CUA
UCA=>UUA
CCA=>CUA
S=>L
P=>L
S=>L
P=>L
rps2416807
16693
16807
16693
CDS
CDS
CDS
CDS
-
-
-
-
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
ACA=>AUA
UCA=>UUA
ACA=>AUA
UCA=>UUA
T=>I
S=>L
T=>I
S=>L

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)