psbE - Plant Editosome Database - BIG Data Center

Summary

Gene: psbE
Function: Photosystem II complex
Species: 52
Editing Factors:11 (CREF3, DYW2, MEF37, MORF2, ORRM1, ORRM1,ORRM6, ORRM6, OTP90, p56, PGN, YL)
Editing Types:
U-to-C (34)
C-to-U (28)
Editing Events: 105 (NA: 43   U-to-C: 34   C-to-U: 28)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Adiantum capillus-venerisChloroplast1
NA: 1
60251-60502CDS-NANA=>NANA=>NA
Alsophila spinulosaChloroplast1
NA: 1
63787-64038CDS-NANA=>NANA=>NA
Ampelopteris proliferaChloroplast2
NA: 1
U-to-C: 1
61331-61582
61531
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Anthoceros angustusChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
82247-82498
82321
82359
CDS
NA
NA
-
+
NA
C-to-U
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Arabidopsis lyrata subsp. lyrata MN47Chloroplast1
C-to-U: 1
64391NA+C-to-UNA=>NANA=>NA
Arabidopsis thalianaChloroplast2
C-to-U: 2
64109CDS
CDS
-C-to-U
C-to-U
CCU=>UCU
CCU=>UCU
P=>S
P=>S
Asplenium pekinenseChloroplast2
NA: 1
U-to-C: 1
60251-60502
60451
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Asplenium prolongatumChloroplast1
NA: 1
60479-60730CDS-NANA=>NANA=>NA
Athyrium anisopterumChloroplast2
NA: 1
U-to-C: 1
61002-61253
61202
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium opacumChloroplast2
NA: 1
U-to-C: 1
60885-61136
61085
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sheareriChloroplast2
NA: 1
U-to-C: 1
61021-61272
61221
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sinenseChloroplast2
NA: 1
U-to-C: 1
60939-61190
61139
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Austroblechnum melanocaulonChloroplast2
NA: 1
U-to-C: 1
61073-61324
61273
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Christella appendiculataChloroplast2
NA: 1
U-to-C: 1
61247-61498
61447
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cuscuta reflexaChloroplast1
C-to-U: 1
43969CDS+C-to-UCCU=>UCUP=>S
Cystopteris chinensisChloroplast2
NA: 1
U-to-C: 1
61051-61302
61251
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia lanceaChloroplast2
NA: 1
U-to-C: 1
60772-61023
60972
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia pycnosoraChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
61087-61338
61089
61287
NA
CDS
NA
+
-
C-to-U
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia viridifronsChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
61074-61325
61076
61274
CDS
NA
NA
-
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplaziopsis cavalerianaChloroplast2
NA: 1
U-to-C: 1
61482-61733
61682
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplaziopsis javanicaChloroplast2
NA: 1
U-to-C: 1
61717-61968
61917
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium bellumChloroplast2
NA: 1
U-to-C: 1
61021-61272
61221
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dilatatumChloroplast2
NA: 1
U-to-C: 1
60940-61191
61140
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dushanenseChloroplast2
NA: 1
U-to-C: 1
60955-61206
61155
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium striatumChloroplast2
NA: 1
U-to-C: 1
60561-60812
60761
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium unilobumChloroplast2
NA: 1
U-to-C: 1
60943-61194
61143
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplopterygium glaucumChloroplast1
NA: 1
77949-78200NA-NANA=>NANA=>NA
Forsythia suspensaChloroplast1
C-to-U: 1
67576CDS-C-to-UCCU=>UCUP=>S
Hevea brasiliensisChloroplast1
C-to-U: 1
68345CDS-C-to-UCCU=>UCUP=>S
Homalosorus pycnocarposChloroplast2
NA: 1
U-to-C: 1
61699-61950
61899
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hymenasplenium unilateraleChloroplast2
NA: 1
U-to-C: 1
61773-62024
61973
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hypseocharis bilobataChloroplast1
C-to-U: 1
8381CDS+C-to-UCCU=>UCUP=>S
Macrothelypteris torresianaChloroplast2
NA: 1
U-to-C: 1
61008-61259
61208
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Marsilea crenataChloroplast1
NA: 1
65514-65765CDS-NANA=>NANA=>NA
Matteuccia struthiopterisChloroplast2
NA: 1
U-to-C: 1
60475-60726
60675
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Nicotiana sylvestrisChloroplast2
C-to-U: 2
66919CDS
CDS
-C-to-U
C-to-U
CCA=>UCA
CCA=>UCA
P=>S
P=>S
Nicotiana tomentosiformisChloroplast1
C-to-U: 1
66790CDS-C-to-UCCA=>UCAP=>S
Nothoceros aenigmaticusPlastid2
NA: 2
84026-84277NA
NA
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Onoclea sensibilisChloroplast2
NA: 1
U-to-C: 1
60069-60320
60269
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Panicum virgatumChloroplast1
C-to-U: 1
63403CDSNAC-to-UNA=>NANA=>NA
Pelargonium alternansChloroplast1
C-to-U: 1
77120CDS-C-to-UCCU=>UCUP=>S
Pseudophegopteris auritaChloroplast2
NA: 1
U-to-C: 1
60604-60855
60804
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Pteridium aquilinum subsp. aquilinumChloroplast2
NA: 1
U-to-C: 1
62885-63136
63085
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhachidosorus consimilisChloroplast2
NA: 1
U-to-C: 1
61771-62022
61971
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Schizaea elegansChloroplast2
NA: 1
U-to-C: 1
53864-54115
54064
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Schizaea pectinataChloroplast2
NA: 1
U-to-C: 1
51548-51799
51748
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Solanum lycopersicumChloroplast3
C-to-U: 3
66481CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
CCA=>UCA
CCA=>UCA
CCA=>UCA
P=>S
P=>S
P=>S
Stegnogramma sagittifoliaChloroplast2
NA: 1
U-to-C: 1
60783-61034
60983
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodsia macrochlaenaChloroplast2
NA: 1
U-to-C: 1
60917-61168
61117
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodsia polystichoidesChloroplast2
NA: 1
U-to-C: 1
60666-60917
60866
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodwardia unigemmataChloroplast2
NA: 1
U-to-C: 1
60928-61179
61128
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)