Elaeis guineensis - Plant Editosome Database - BIG Data Center

Summary

Species: Elaeis guineensis
NCBI Taxonomy: 51953
Organelle:Chloroplast (NC_017602.1)
Edited Genes:18
Editing Events:33
Gene Editing Events Genomic Position Region Strand RNA Type Codons Amino Acids
atpB154553CDSNAmRNAC-to-UUCA=>UUAS=>L
atpF113468CDSNAmRNAC-to-UCCA=>CUAP=>L
clpP270932
72060
CDS
CDS
NA
NA
mRNA
mRNA
C-to-U
C-to-U
CAU=>UAU
UCA=>UUA
H=>Y
S=>L
ndhB197821CDSNAmRNAC-to-UCCA=>CUAP=>L
ndhH1124269CDSNAmRNAC-to-UUAC=>UAUY=>Y
ndhK349916
50075
50221
CDS
CDS
CDS
NA
NA
NA
mRNA
mRNA
mRNA
C-to-U
U-to-C
C-to-U
UCA=>UUA
AUG=>ACG
GUC=>GUU
S=>L
M=>T
V=>V
petB177124CDSNAmRNAC-to-UCGG=>UGGR=>W
rpl23154841
86345
87325
CDS
Intron
CDS
NA
NA
NA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
ACG=>AUG
GCC=>GCU
ACG=>AUG
T=>M
NA=>NA
T=>M
rpl22184926CDSNAmRNAC-to-UUCA=>UUAS=>L
rpl23287556
87538
CDS
CDS
NA
NA
mRNA
mRNA
C-to-U
C-to-U
UCU=>UUU
UCA=>UUA
S=>F
S=>L
rps12299699
99776
Intron
Intron
NA
NA
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
GUC=>GUU
NA=>NA
NA=>NA
rps1615452IntronNAmRNAC-to-UCCC=>CCUNA=>NA
rps3484684
84244
84131
84087
CDS
CDS
CDS
CDS
NA
NA
NA
NA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
UUC=>UUU
ACA=>AUA
CAU=>UAU
AUC=>AUU
F=>F
T=>I
H=>Y
I=>I
rps7199037CDSNAmRNAC-to-UGCC=>GCUA=>A
rps8181489CDSNAmRNAU-to-CAAU=>AACN=>N
ycf15126783
127388
127797
127817
127823
CDS
CDS
CDS
CDS
CDS
NA
NA
NA
NA
NA
mRNA
mRNA
mRNA
mRNA
mRNA
U-to-C
C-to-U
U-to-C
U-to-C
C-to-U
CUU=>CCU
AUC=>AUU
AUU=>ACU
GAU=>GAC
UAC=>UAU
L=>P
I=>I
I=>T
D=>D
Y=>Y
ycf2288477
88535
CDS
CDS
NA
NA
mRNA
mRNA
G-to-A
G-to-A
UCG=>UCA
GAA=>AAA
S=>S
E=>K
ycf4161530CDSNAmRNAC-to-UUCA=>UUAS=>L

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)