ndhK - Plant Editosome Database - BIG Data Center

Summary

Gene: ndhK
Function: NADH-plastoquinone oxidoreductase
Species: 41
Editing Types:
C-to-U (11)
U-to-C (8)
Editing Events: 59 (NA: 40   C-to-U: 11   U-to-C: 8)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Adiantum capillus-venerisChloroplast1
NA: 1
46584-47255CDS-NANA=>NANA=>NA
Ampelopteris proliferaChloroplast2
NA: 1
U-to-C: 1
47506-48243
47535
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Anthoceros angustusChloroplast5
C-to-U: 3
NA: 1
U-to-C: 1
67188-67877
67534
67549
67583
67828
NA
NA
NA
NA
CDS
+
-
C-to-U
C-to-U
U-to-C
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Apopellia endiviifoliaChloroplast1
C-to-U: 1
53374CDS-C-to-UAUG=>UUGM=>L
Asplenium pekinenseChloroplast1
NA: 1
47191-47928CDS-NANA=>NANA=>NA
Asplenium prolongatumChloroplast1
NA: 1
46967-47698CDS-NANA=>NANA=>NA
Athyrium opacumChloroplast1
NA: 1
47121-47858CDS-NANA=>NANA=>NA
Athyrium sheareriChloroplast1
NA: 1
47252-47989CDS-NANA=>NANA=>NA
Athyrium sinenseChloroplast1
NA: 1
47223-47960CDS-NANA=>NANA=>NA
Austroblechnum melanocaulonChloroplast2
NA: 1
U-to-C: 1
47370-48107
47399
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cocos nuciferaChloroplast2
C-to-U: 2
48875CDS
CDS
-C-to-U
C-to-U
UCG=>UUG
UCG=>UUG
S=>L
S=>L
Cystopteris chinensisChloroplast1
NA: 1
47229-47966CDS-NANA=>NANA=>NA
Deparia lanceaChloroplast1
NA: 1
46956-47693CDS-NANA=>NANA=>NA
Deparia pycnosoraChloroplast1
NA: 1
47281-48018CDS-NANA=>NANA=>NA
Deparia viridifronsChloroplast1
NA: 1
47268-48005CDS-NANA=>NANA=>NA
Diplaziopsis cavalerianaChloroplast1
NA: 1
47831-48568CDS-NANA=>NANA=>NA
Diplaziopsis javanicaChloroplast1
NA: 1
47932-48678CDS-NANA=>NANA=>NA
Diplazium bellumChloroplast1
NA: 1
47282-48019CDS-NANA=>NANA=>NA
Diplazium dilatatumChloroplast1
NA: 1
47217-47954CDS-NANA=>NANA=>NA
Diplazium dushanenseChloroplast2
NA: 1
U-to-C: 1
47201-47935
47230
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium striatumChloroplast1
NA: 1
46868-47605CDS-NANA=>NANA=>NA
Diplazium unilobumChloroplast1
NA: 1
47196-47933CDS-NANA=>NANA=>NA
Dryopteris decipiensChloroplast1
NA: 1
47220-47951CDS-NANA=>NANA=>NA
Elaeis guineensisChloroplast3
C-to-U: 2
U-to-C: 1
49916
50075
50221
CDS
CDS
CDS
NAC-to-U
U-to-C
C-to-U
GUC=>GUU
AUG=>ACG
UCA=>UUA
V=>V
M=>T
S=>L
Festuca arundinaceaChloroplast1
NA: 1
49085-49825CDS-NANA=>NANA=>NA
Hevea brasiliensisChloroplast1
C-to-U: 1
53277CDS-C-to-UUCA=>UUAS=>L
Homalosorus pycnocarposChloroplast1
NA: 1
47955-48692CDS-NANA=>NANA=>NA
Hymenasplenium unilateraleChloroplast1
NA: 1
48177-48908CDS-NANA=>NANA=>NA
Hypodematium crenatumChloroplast1
NA: 1
47152-47889CDS-NANA=>NANA=>NA
Macrothelypteris torresianaChloroplast2
NA: 1
U-to-C: 1
47286-48023
47327
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Matteuccia struthiopterisChloroplast1
NA: 1
47597-48334CDS-NANA=>NANA=>NA
Nothoceros aenigmaticusPlastid2
NA: 2
69075-69755NA
NA
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Onoclea sensibilisChloroplast1
NA: 1
47273-48010CDS-NANA=>NANA=>NA
Phalaenopsis aphrodite subsp. formosanaChloroplast1
NA: 1
50570-52080NA-NANA=>NANA=>NA
Phalaenopsis equestrisChloroplast1
NA: 1
50647-51187NA-NANA=>NANA=>NA
Pseudophegopteris auritaChloroplast2
NA: 1
U-to-C: 1
46706-47443
46726
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhachidosorus consimilisChloroplast1
NA: 1
47930-48667CDS-NANA=>NANA=>NA
Schwalbea americanaChloroplast1
NA: 1
49895-50644CDS-NANA=>NANA=>NA
Stegnogramma sagittifoliaChloroplast2
NA: 1
U-to-C: 1
47334-48071
47363
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodsia macrochlaenaChloroplast1
NA: 1
47161-47898CDS-NANA=>NANA=>NA
Woodsia polystichoidesChloroplast1
NA: 1
46972-47709CDS-NANA=>NANA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)