rpl22 - Plant Editosome Database - BIG Data Center

Summary

Gene: rpl22
Function: Ribosomal protein
Species: 55
Editing Types:
U-to-C (35)
C-to-U (17)
Editing Events: 112 (NA: 60   U-to-C: 35   C-to-U: 17)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Adiantum capillus-venerisChloroplast1
NA: 1
79254-79622CDS-NANA=>NANA=>NA
Alsophila spinulosaChloroplast1
NA: 1
83321-83701CDS-NANA=>NANA=>NA
Ampelopteris proliferaChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
79827-80195
79949
80194
NA
NA
CDS
+
-
U-to-C
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Anthoceros angustusChloroplast2
NA: 1
U-to-C: 1
102592-102951
102774
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Asplenium pekinenseChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
78482-78853
78607
78852
NA
CDS
NA
+
-
U-to-C
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Asplenium prolongatumChloroplast4
C-to-U: 1
NA: 1
U-to-C: 2
78649-79023
78669
78777
79022
NA
CDS
NA
NA
+
-
C-to-U
NA
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium anisopterumChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
79588-79965
79719
79964
NA
CDS
NA
+
-
C-to-U
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium opacumChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
79426-79803
79557
79802
NA
NA
CDS
+
-
U-to-C
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sheareriChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
79578-79955
79709
79954
NA
CDS
NA
+
-
C-to-U
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sinenseChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
79534-79911
79665
79910
NA
CDS
NA
+
-
U-to-C
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Austroblechnum melanocaulonChloroplast2
NA: 1
U-to-C: 1
79664-80041
79795
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Christella appendiculataChloroplast2
NA: 1
U-to-C: 1
79674-80051
79805
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cyrtomium devexiscapulaeChloroplast2
NA: 1
U-to-C: 1
79496-79873
79627
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cyrtomium falcatumChloroplast2
NA: 1
U-to-C: 1
79644-80021
79775
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cystopteris chinensisChloroplast2
NA: 1
U-to-C: 1
79721-80098
79852
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia lanceaChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
79343-79720
79474
79719
NA
CDS
NA
+
-
U-to-C
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia pycnosoraChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
79642-80019
79773
80018
NA
NA
CDS
+
-
U-to-C
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia viridifronsChloroplast2
NA: 1
U-to-C: 1
79633-80010
79764
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium bellumChloroplast2
C-to-U: 1
NA: 1
79565-79942
79941
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dilatatumChloroplast2
NA: 1
U-to-C: 1
79492-79869
79623
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dushanenseChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
79498-79875
79629
79874
NA
CDS
NA
+
-
C-to-U
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium striatumChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
79067-79444
79198
79443
NA
CDS
NA
+
-
C-to-U
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium unilobumChloroplast2
NA: 1
U-to-C: 1
79505-79882
79636
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Dryopteris decipiensChloroplast2
NA: 1
U-to-C: 1
79565-79942
79696
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Elaeis guineensisChloroplast1
C-to-U: 1
84926CDSNAC-to-UUCA=>UUAS=>L
Hymenasplenium unilateraleChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
80434-80805
80559
80804
NA
CDS
NA
+
-
C-to-U
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hypodematium crenatumChloroplast2
NA: 1
U-to-C: 1
79207-79581
79335
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Lagerstroemia indicaChloroplast2
NA: 2
83327-83806CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Lepisorus clathratusChloroplast2
NA: 1
U-to-C: 1
78200-78577
78331
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Luzuriaga radicansChloroplast1
NA: 1
86162-86524CDS-NANA=>NANA=>NA
Lygodium japonicumChloroplast1
NA: 1
82526-82939CDS-NANA=>NANA=>NA
Machilus pauhoiChloroplast1
NA: 1
87019-87426CDS-NANA=>NANA=>NA
Machilus thunbergiiChloroplast1
NA: 1
87055-87462CDS-NANA=>NANA=>NA
Macrothelypteris torresianaChloroplast2
NA: 1
U-to-C: 1
79486-79863
79617
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Matteuccia struthiopterisChloroplast2
NA: 1
U-to-C: 1
79025-79402
79156
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Nothoceros aenigmaticusPlastid2
NA: 2
104604-104963NA
NA
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Pseudophegopteris auritaChloroplast2
NA: 1
U-to-C: 1
79123-79500
79254
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Pteridium aquilinum subsp. aquilinumChloroplast2
NA: 1
U-to-C: 1
81388-81807
81561
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhachidosorus consimilisChloroplast2
NA: 1
U-to-C: 1
80379-80750
80504
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Sedum oryzifoliumChloroplast1
NA: 1
80824-81201CDS-NANA=>NANA=>NA
Sedum sarmentosumChloroplast1
NA: 1
81621-81998CDS-NANA=>NANA=>NA
Stegnogramma sagittifoliaChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
79272-79649
79403
79648
CDS
NA
NA
-
+
NA
C-to-U
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Vitis acerifoliaChloroplast1
NA: 1
88395-88883CDS-NANA=>NANA=>NA
Vitis aestivalisChloroplast1
NA: 1
88291-88779CDS-NANA=>NANA=>NA
Vitis amurensisChloroplast1
NA: 1
88368-88856CDS-NANA=>NANA=>NA
Vitis cinereaChloroplast1
NA: 1
88390-88878CDS-NANA=>NANA=>NA
Vitis coignetiaeChloroplast1
NA: 1
88410-88898CDS-NANA=>NANA=>NA
Vitis cordifoliaChloroplast1
NA: 1
88390-88878CDS-NANA=>NANA=>NA
Vitis ficifoliaChloroplast1
NA: 1
88378-88866CDS-NANA=>NANA=>NA
Vitis mustangensisChloroplast1
NA: 1
88394-88882CDS-NANA=>NANA=>NA
Vitis rupestrisChloroplast1
NA: 1
88385-88873CDS-NANA=>NANA=>NA
Vitis x champiniiChloroplast1
NA: 1
88392-88880CDS-NANA=>NANA=>NA
Woodsia macrochlaenaChloroplast2
NA: 1
U-to-C: 1
79520-79924
79678
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodsia polystichoidesChloroplast4
C-to-U: 2
NA: 1
U-to-C: 1
79237-79614
79239
79368
79613
NA
NA
CDS
NA
+
-
U-to-C
C-to-U
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodwardia unigemmataChloroplast3
NA: 1
U-to-C: 2
79493-79870
79507
79624
NA
NA
CDS
+
-
U-to-C
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)