ndhH - Plant Editosome Database - BIG Data Center

Summary

Gene: ndhH
Function: NADH-plastoquinone oxidoreductase
Species: 46
Editing Types:
C-to-U (41)
U-to-C (14)
Editing Events: 99 (NA: 44   C-to-U: 41   U-to-C: 14)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Adiantum capillus-venerisChloroplast1
NA: 1
117499-118720CDS-NANA=>NANA=>NA
Alsophila spinulosaChloroplast1
NA: 1
122597-123781CDS-NANA=>NANA=>NA
Ampelopteris proliferaChloroplast2
C-to-U: 1
NA: 1
118511-119689
118513
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Anthoceros angustusChloroplast25
C-to-U: 10
NA: 1
U-to-C: 14
135734-136915
135739
135870
135894
136031
136039
136047
136138
136216
136228
136272
136290
136312
136371
136411
136413
136417
136446
136476
136527
136534
136588
136692
136791
136821
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
CDS
NA
NA
NA
NA
NA
NA
NA
NA
+
-
U-to-C
C-to-U
C-to-U
U-to-C
U-to-C
U-to-C
C-to-U
U-to-C
C-to-U
U-to-C
U-to-C
U-to-C
U-to-C
C-to-U
C-to-U
U-to-C
NA
C-to-U
C-to-U
U-to-C
U-to-C
U-to-C
C-to-U
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Asplenium pekinenseChloroplast1
NA: 1
118020-119198CDS-NANA=>NANA=>NA
Athyrium opacumChloroplast1
NA: 1
117868-119046CDS-NANA=>NANA=>NA
Athyrium sheareriChloroplast1
NA: 1
117983-119161CDS-NANA=>NANA=>NA
Athyrium sinenseChloroplast1
NA: 1
118089-119267CDS-NANA=>NANA=>NA
Austroblechnum melanocaulonChloroplast1
NA: 1
117511-118689CDS-NANA=>NANA=>NA
Christella appendiculataChloroplast2
C-to-U: 1
NA: 1
118311-119489
118313
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cocos nuciferaChloroplast4
C-to-U: 4
122537
122577
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
UCU=>UUU
CAU=>UAU
CAU=>UAU
S=>F
S=>F
S=>L
S=>L
Cystopteris chinensisChloroplast1
NA: 1
118064-119242CDS-NANA=>NANA=>NA
Deparia lanceaChloroplast2
C-to-U: 1
NA: 1
117918-119096
119095
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia pycnosoraChloroplast2
C-to-U: 1
NA: 1
118102-119280
119279
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia viridifronsChloroplast2
C-to-U: 1
NA: 1
117898-119076
119075
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplaziopsis javanicaChloroplast1
NA: 1
118545-119744CDS-NANA=>NANA=>NA
Diplazium bellumChloroplast1
NA: 1
118274-119452CDS-NANA=>NANA=>NA
Diplazium dilatatumChloroplast1
NA: 1
118010-119188CDS-NANA=>NANA=>NA
Diplazium dushanenseChloroplast1
NA: 1
117588-118766CDS-NANA=>NANA=>NA
Diplazium striatumChloroplast1
NA: 1
117637-118815CDS-NANA=>NANA=>NA
Diplazium unilobumChloroplast1
NA: 1
118175-119353CDS-NANA=>NANA=>NA
Dryopteris decipiensChloroplast1
NA: 1
117901-119079CDS-NANA=>NANA=>NA
Elaeis guineensisChloroplast1
C-to-U: 1
124269CDSNAC-to-UUAC=>UAUY=>Y
Hevea brasiliensisChloroplast1
C-to-U: 1
128765CDS-C-to-UCAU=>UAUH=>Y
Homalosorus pycnocarposChloroplast1
NA: 1
118845-120044CDS-NANA=>NANA=>NA
Huperzia lucidulaChloroplast1
NA: 1
128090-129271CDS+NANA=>NANA=>NA
Huperzia serrataChloroplast2
C-to-U: 2
127989
129167
CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Hymenasplenium unilateraleChloroplast1
NA: 1
118534-119712CDS-NANA=>NANA=>NA
Hypodematium crenatumChloroplast1
NA: 1
117018-118196CDS-NANA=>NANA=>NA
Isoetes flaccidaChloroplast1
NA: 1
110370-111551CDS+NANA=>NANA=>NA
Lygodium japonicumChloroplast1
NA: 1
122392-123576CDS-NANA=>NANA=>NA
Macrothelypteris torresianaChloroplast2
C-to-U: 1
NA: 1
117992-119170
117994
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Marsilea crenataChloroplast1
NA: 1
121475-122659CDS-NANA=>NANA=>NA
Matteuccia struthiopterisChloroplast1
NA: 1
117674-118852CDS-NANA=>NANA=>NA
Millettia pinnataChloroplast4
C-to-U: 4
120567
121217
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
CAU=>UAU
GAC=>GAU
GAC=>GAU
CAU=>UAU
H=>Y
D=>D
D=>D
H=>Y
Myriopteris lindheimeriChloroplast2
C-to-U: 1
NA: 1
120430-121614
121613
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Nothoceros aenigmaticusPlastid2
NA: 2
127607-128788NA
NA
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Onoclea sensibilisChloroplast1
NA: 1
116191-117369CDS-NANA=>NANA=>NA
Penthorum chinenseChloroplast1
NA: 1
124651-125823CDS-NANA=>NANA=>NA
Pseudophegopteris auritaChloroplast2
C-to-U: 1
NA: 1
117042-118220
117044
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhachidosorus consimilisChloroplast2
C-to-U: 1
NA: 1
119157-120335
120334
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Sedum sarmentosumChloroplast1
NA: 1
118841-120034CDS-NANA=>NANA=>NA
Stegnogramma sagittifoliaChloroplast2
C-to-U: 1
NA: 1
117847-119025
117849
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodsia macrochlaenaChloroplast1
NA: 1
117905-119083CDS-NANA=>NANA=>NA
Woodsia polystichoidesChloroplast1
NA: 1
117578-118756CDS-NANA=>NANA=>NA
Woodwardia unigemmataChloroplast2
C-to-U: 1
NA: 1
119176-120354
119178
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)