PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Pop_G19G028433 View in Genome Browser
Position	chrG19:13606134-13608312 (+) 2178bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the actin family
Organism	Populus alba x Populus glandulosa
Also AS	Potri.019G010400AT5G09810Potri.019G010400.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Pop_G19G084137 CBL-interacting serine threonine-protein kinase Pop_G19G028433 Belongs to the actin family Pop_G19G080823 Belongs to the protein kinase superfamily
Regulatory gene	Pop_A01G004199 GAGA binding protein-like family Pop_A02G005181 Protein BASIC PENTACYSTEINE6-like Pop_A04G028302 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005856	cytoskeleton	CC
GO:0043226	organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC