Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Basic Information
Gene ID
AmTr_scaff00006.100.v1.0.g
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Position
AmTr_scaff00006:4709354-4710265 (-)
911bp
Gene Type
gene
Gene Description (Protein Product)
transcription factor
Organism
Amborella trichopoda
Also AS AT5G67300AMTR_s00006p00225600

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00025.251.v1.0.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
AmTr_scaff00107.32.v1.0.g Abscisic acid receptor
AmTr_scaff00122.5.v1.0.g Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Regulatory gene
AmTr_scaff00001.225.v1.0.g Floral homeotic protein
AmTr_scaff00001.409.v1.0.g MADS-box protein
AmTr_scaff00001.413.v1.0.g MADS-box transcription factor
Target gene
AmTr_scaff00001.10.v1.0.g -
AmTr_scaff00001.107.v1.0.g
AmTr_scaff00001.117.v1.0.g RNA recognition motif

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail