Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00045.145.v1.0.g
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Position
AmTr_scaff00045:2017245-2021566 (+)
4321bp
Gene Type
gene
Gene Description (Protein Product)
transcription factor
Organism
Amborella trichopoda
Also AS AT1G09530AMTR_s00045p00141060

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00045.165.v1.0.g Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
AmTr_scaff00081.79.v1.0.g transcription factor
AmTr_scaff00175.2.v1.0.g histone deacetylase
Regulatory gene
AmTr_scaff00001.225.v1.0.g Floral homeotic protein
AmTr_scaff00001.321.v1.0.g Trihelix transcription factor
AmTr_scaff00001.409.v1.0.g MADS-box protein
Target gene
AmTr_scaff00001.117.v1.0.g RNA recognition motif
AmTr_scaff00001.187.v1.0.g phosphoglucomutase
AmTr_scaff00001.253.v1.0.g BEST Arabidopsis thaliana protein match is Arabidopsis protein of

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map04712 Circadian rhythm - plant -
map04075 Plant hormone signal transduction -
map04075 Plant hormone signal transduction -