Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00048.67.v1.0.g
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Position
AmTr_scaff00048:1653234-1657767 (-)
4533bp
Gene Type
gene
Gene Description (Protein Product)
inactive shikimate kinase like 2 chloroplastic
Organism
Amborella trichopoda
Also AS AT2G35500AMTR_s00048p00123660

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00067.21.v1.0.g Protein CHAPERONE-LIKE PROTEIN OF POR1-like
AmTr_scaff00066.247.v1.0.g RNA-binding protein Luc7-like
AmTr_scaff00068.152.v1.0.g 30S ribosomal protein S20
Regulatory gene
AmTr_scaff00001.225.v1.0.g Floral homeotic protein
AmTr_scaff00001.409.v1.0.g MADS-box protein
AmTr_scaff00001.413.v1.0.g MADS-box transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000287 magnesium ion binding MF
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046872 metal ion binding MF