PPGR - Gene Detail

Basic Information

Gene ID	AmTr_scaff00054.12.v1.0.g View in Genome Browser
Position	AmTr_scaff00054:324032-337461 (+) 13429bp
Gene Type	gene
Gene Description (Protein Product)	"RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1
Organism	Amborella trichopoda
Also AS	AT1G67090AMTR_s00054p00039660

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

AmTr_scaff00606.2.v1.0.g RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site

AmTr_scaff00334.4.v1.0.g RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site

AmTr_scaff00079.19.v1.0.g RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site

Regulatory gene

AmTr_scaff00001.225.v1.0.g Floral homeotic protein

AmTr_scaff00001.409.v1.0.g MADS-box protein

AmTr_scaff00001.413.v1.0.g MADS-box transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00710	Carbon fixation in photosynthetic organisms	-
map00630	Glyoxylate and dicarboxylate metabolism	-