Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Bpev01.c3557.g0001
View in Genome Browser
Position
Contig3557:14439-17574 (+)
3135bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the glutamine synthetase family
Organism
Betula pendula
Also AS AT3G53180

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Bpev01.c5525.g0001 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate
Bpev01.c5260.g0004 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Bpev01.c5615.g0002 Part of the anaerobic respiratory chain of trimethylamine-N-oxide reductase TorA. Acts by transferring electrons from the membranous menaquinones to TorA. This transfer probably involves an electron transfer pathway from menaquinones to the N-terminal domain of TorC, then from the N-terminus to the C-terminus, and finally to TorA. TorC apocytochrome negatively autoregulates the torCAD operon probably by inhibiting the TorS kinase activity
Regulatory gene
Bpev01.c0428.g0006 GAGA binding protein-like family
Bpev01.c0718.g0004 Protein BASIC PENTACYSTEINE2-like
Bpev01.c1638.g0014 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000905 sporocarp development involved in asexual reproduction BP
GO:0001896 autolysis BP
GO:0003006 developmental process involved in reproduction BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006725 cellular aromatic compound metabolic process BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008219 cell death BP
GO:0009058 biosynthetic process BP
GO:0009403 toxin biosynthetic process BP
GO:0009404 toxin metabolic process BP
GO:0009889 regulation of biosynthetic process BP
GO:0009891 positive regulation of biosynthetic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010720 positive regulation of cell development BP
GO:0010913 regulation of sterigmatocystin biosynthetic process BP
GO:0010914 positive regulation of sterigmatocystin biosynthetic process BP
GO:0012501 programmed cell death BP
GO:0018130 heterocycle biosynthetic process BP
GO:0019222 regulation of metabolic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0019748 secondary metabolic process BP
GO:0019954 asexual reproduction BP
GO:0022414 reproductive process BP
GO:0030154 cell differentiation BP
GO:0030436 asexual sporulation BP
GO:0030582 reproductive fruiting body development BP
GO:0030584 sporocarp development BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031328 positive regulation of cellular biosynthetic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0034305 regulation of asexual sporulation BP
GO:0043385 mycotoxin metabolic process BP
GO:0043386 mycotoxin biosynthetic process BP
GO:0043455 regulation of secondary metabolic process BP
GO:0043934 sporulation BP
GO:0043937 regulation of sporulation BP
GO:0043938 positive regulation of sporulation BP
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0044550 secondary metabolite biosynthetic process BP
GO:0045460 sterigmatocystin metabolic process BP
GO:0045461 sterigmatocystin biosynthetic process BP
GO:0045595 regulation of cell differentiation BP
GO:0045597 positive regulation of cell differentiation BP
GO:0046483 heterocycle metabolic process BP
GO:0048315 conidium formation BP
GO:0048468 cell development BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0051094 positive regulation of developmental process BP
GO:0060284 regulation of cell development BP
GO:0061458 reproductive system development BP
GO:0061794 conidium development BP
GO:0065007 biological regulation BP
GO:0071704 organic substance metabolic process BP
GO:0075259 spore-bearing structure development BP
GO:0075306 regulation of conidium formation BP
GO:0075307 positive regulation of conidium formation BP
GO:1900376 regulation of secondary metabolite biosynthetic process BP
GO:1900378 positive regulation of secondary metabolite biosynthetic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901376 organic heteropentacyclic compound metabolic process BP
GO:1901378 organic heteropentacyclic compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1903664 regulation of asexual reproduction BP
GO:1903666 positive regulation of asexual reproduction BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00910 Nitrogen metabolism -
map00630 Glyoxylate and dicarboxylate metabolism -
map00250 Alanine, aspartate and glutamate metabolism -