PPGR - Gene Detail

Basic Information

Gene ID	Bpev01.c5090.g0001 View in Genome Browser
Position	Contig5090:468-1537 (+) 1069bp
Gene Type	gene
Gene Description (Protein Product)	Aspartate ammonia-lyase
Organism	Betula pendula
Also AS	AT5G50950

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Bpev01.c5487.g0003 Catalyzes the oxidation of L-aspartate to iminoaspartate

Bpev01.c5135.g0002 Glutamate-1-semialdehyde aminotransferase

Bpev01.c5198.g0001 an anaerobic reaction coupled to energy-yielding reactions

Load All Networks

Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0006082	organic acid metabolic process	BP
GO:0006520	amino acid metabolic process	BP
GO:0006531	aspartate metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008652	amino acid biosynthetic process	BP
GO:0008797	aspartate ammonia-lyase activity	MF
GO:0009058	biosynthetic process	BP
GO:0009066	aspartate family amino acid metabolic process	BP
GO:0009893	positive regulation of metabolic process	BP
GO:0009987	cellular process	BP
GO:0010468	regulation of gene expression	BP
GO:0010604	positive regulation of macromolecule metabolic process	BP
GO:0010628	positive regulation of gene expression	BP
GO:0010755	regulation of plasminogen activation	BP
GO:0010756	positive regulation of plasminogen activation	BP
GO:0010954	positive regulation of protein processing	BP
GO:0016053	organic acid biosynthetic process	BP
GO:0016829	lyase activity	MF
GO:0016840	carbon-nitrogen lyase activity	MF
GO:0016841	ammonia-lyase activity	MF
GO:0019222	regulation of metabolic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0030162	regulation of proteolysis	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031325	positive regulation of cellular metabolic process	BP
GO:0032268	regulation of protein metabolic process	BP
GO:0032270	positive regulation of protein metabolic process	BP
GO:0043436	oxoacid metabolic process	BP
GO:0043648	dicarboxylic acid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0045862	positive regulation of proteolysis	BP
GO:0046394	carboxylic acid biosynthetic process	BP
GO:0048518	positive regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051173	positive regulation of nitrogen compound metabolic process	BP
GO:0051246	regulation of protein metabolic process	BP
GO:0051247	positive regulation of protein metabolic process	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0070613	regulation of protein processing	BP
GO:0071704	organic substance metabolic process	BP
GO:0080090	regulation of primary metabolic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901605	alpha-amino acid metabolic process	BP
GO:1903317	regulation of protein maturation	BP
GO:1903319	positive regulation of protein maturation	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00250	Alanine, aspartate and glutamate metabolism	-