Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Bpev01.c5198.g0001
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Position
Contig5198:23-1689 (+)
1666bp
Gene Type
gene
Gene Description (Protein Product)
an anaerobic reaction coupled to energy-yielding reactions
Organism
Betula pendula
Also AS

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Bpev01.c5615.g0002 Part of the anaerobic respiratory chain of trimethylamine-N-oxide reductase TorA. Acts by transferring electrons from the membranous menaquinones to TorA. This transfer probably involves an electron transfer pathway from menaquinones to the N-terminal domain of TorC, then from the N-terminus to the C-terminus, and finally to TorA. TorC apocytochrome negatively autoregulates the torCAD operon probably by inhibiting the TorS kinase activity
Bpev01.c5260.g0004 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Bpev01.c5359.g0008 pyridine nucleotide-disulphide oxidoreductase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0006091 generation of precursor metabolites and energy BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009060 aerobic respiration BP
GO:0009061 anaerobic respiration BP
GO:0009987 cellular process BP
GO:0015980 energy derivation by oxidation of organic compounds BP
GO:0016491 oxidoreductase activity MF
GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors MF
GO:0016662 oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor MF
GO:0030151 molybdenum ion binding MF
GO:0030288 outer membrane-bounded periplasmic space CC
GO:0030313 cell envelope CC
GO:0031975 envelope CC
GO:0042597 periplasmic space CC
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0044237 cellular metabolic process BP
GO:0044464 obsolete cell part CC
GO:0045333 cellular respiration BP
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0048037 obsolete cofactor binding MF
GO:0050626 trimethylamine-N-oxide reductase (cytochrome c) activity MF
GO:0055114 obsolete oxidation-reduction process BP
KEGG Term Name Description
map01100 Metabolic pathways -
map01100 Metabolic pathways -
map01100 Metabolic pathways -
map00920 Sulfur metabolism -
map00780 Biotin metabolism -