PPGR - Gene Detail

Basic Information

Gene ID	Bpev01.c5150.g0001 View in Genome Browser
Position	Contig5150:10-1643 (-) 1633bp
Gene Type	gene
Gene Description (Protein Product)	"Cytochrome bo(3) ubiquinol terminal oxidase is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration. Has proton pump activity across the membrane in addition to electron transfer
Organism	Betula pendula
Also AS	ATMG01360

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Bpev01.c5260.g0004 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family

Bpev01.c5487.g0003 Catalyzes the oxidation of L-aspartate to iminoaspartate

Bpev01.c5198.g0001 an anaerobic reaction coupled to energy-yielding reactions

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005215	transporter activity	MF
GO:0005488	binding	MF
GO:0005507	copper ion binding	MF
GO:0005575	cellular_component	CC
GO:0005623	obsolete cell	CC
GO:0005886	plasma membrane	CC
GO:0005887	plasma membrane	CC
GO:0006091	generation of precursor metabolites and energy	BP
GO:0006810	transport	BP
GO:0006811	monoatomic ion transport	BP
GO:0006812	monoatomic cation transport	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008324	monoatomic cation transmembrane transporter activity	MF
GO:0009055	electron transfer activity	MF
GO:0009060	aerobic respiration	BP
GO:0009319	cytochrome o ubiquinol oxidase complex	CC
GO:0009486	cytochrome bo3 ubiquinol oxidase activity	MF
GO:0009987	cellular process	BP
GO:0015002	obsolete heme-copper terminal oxidase activity	MF
GO:0015075	monoatomic ion transmembrane transporter activity	MF
GO:0015077	inorganic cation transmembrane transporter activity	MF
GO:0015078	proton transmembrane transporter activity	MF
GO:0015318	inorganic molecular entity transmembrane transporter activity	MF
GO:0015399	primary active transmembrane transporter activity	MF
GO:0015453	oxidoreduction-driven active transmembrane transporter activity	MF
GO:0015672	inorganic cation transmembrane transport	BP
GO:0015980	energy derivation by oxidation of organic compounds	BP
GO:0015988	energy coupled proton transmembrane transport, against electrochemical gradient	BP
GO:0015990	electron transport coupled proton transport	BP
GO:0016020	membrane	CC
GO:0016021	membrane	CC
GO:0016491	oxidoreductase activity	MF
GO:0019646	aerobic electron transport chain	BP
GO:0020037	heme binding	MF
GO:0022804	active transmembrane transporter activity	MF
GO:0022857	transmembrane transporter activity	MF
GO:0022890	inorganic cation transmembrane transporter activity	MF
GO:0022900	electron transport chain	BP
GO:0022904	respiratory electron transport chain	BP
GO:0031224	obsolete intrinsic component of membrane	CC
GO:0031226	obsolete intrinsic component of plasma membrane	CC
GO:0032991	protein-containing complex	CC
GO:0034220	monoatomic ion transmembrane transport	BP
GO:0043167	ion binding	MF
GO:0043169	cation binding	MF
GO:0044237	cellular metabolic process	BP
GO:0044425	obsolete membrane part	CC
GO:0044459	obsolete plasma membrane part	CC
GO:0044464	obsolete cell part	CC
GO:0045333	cellular respiration	BP
GO:0046872	metal ion binding	MF
GO:0046906	tetrapyrrole binding	MF
GO:0046914	transition metal ion binding	MF
GO:0048037	obsolete cofactor binding	MF
GO:0048038	quinone binding	MF
GO:0048039	ubiquinone binding	MF
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0055085	transmembrane transport	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0070069	cytochrome complex	CC
GO:0071944	cell periphery	CC
GO:0097159	organic cyclic compound binding	MF
GO:0098655	monoatomic cation transmembrane transport	BP
GO:0098660	inorganic ion transmembrane transport	BP
GO:0098662	inorganic cation transmembrane transport	BP
GO:0098796	membrane protein complex	CC
GO:1901363	heterocyclic compound binding	MF
GO:1902494	catalytic complex	CC
GO:1902600	proton transmembrane transport	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00190	Oxidative phosphorylation	-