Basic Information
Gene ID
Position
hic_scaffold_13032:841-4584 (+)
3743bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the cysteine synthase cystathionine beta- synthase family
Organism
Also AS AT3G59760

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene51355 Cys/Met metabolism PLP-dependent enzyme
PH02Gene51048 Belongs to the cysteine synthase cystathionine beta- synthase family
PH02Gene51447 Belongs to the cysteine synthase cystathionine beta- synthase family
Regulatory gene
PH02Gene00094 Lateral organ boundaries (LOB) domain
PH02Gene00185 GAGA binding protein-like family
PH02Gene00239 zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00920 Sulfur metabolism -
map00270 Cysteine and methionine metabolism Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD:M00021]. In animals, methionine-derived homocysteine is used as sulfur source and its condensation product with serine (cystathionine) is converted to cysteine [MD:M00338]. Cysteine is metabolized to pyruvate in multiple routes. Methionine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, methionine is synthesized from aspartate [MD:M00017]. S-Adenosylmethionine (SAM), synthesized from methionine and ATP, is a methyl group donor in many important transfer reactions including DNA methylation for regulation of gene expression. SAM may also be used to regenerate methionine in the methionine salvage pathway [MD:M00034].