Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PtQG38900
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Position
chr12:1261639984-1261642026 (+)
2042bp
Gene Type
gene
Gene Description (Protein Product)
Translation initiation factor eIF-2B subunit
Organism
Pinus tabuliformis
Also AS AT5G19485

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG35700 translation initiation factor eIF-2B subunit epsilon
PtXG28760 translation initiation factor eIF-2B subunit epsilon
PtXG50780 component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
Regulatory gene
Pt0G10630 Transcription factor
Pt0G32790 transcription factor bHLH041
Pt0G38870 Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0002253 activation of immune response BP
GO:0002376 immune system process BP
GO:0002429 immune response-activating cell surface receptor signaling pathway BP
GO:0002682 regulation of immune system process BP
GO:0002684 positive regulation of immune system process BP
GO:0002757 immune response-activating signaling pathway BP
GO:0002764 immune response-regulating signaling pathway BP
GO:0002768 immune response-regulating cell surface receptor signaling pathway BP
GO:0003674 molecular_function MF
GO:0005085 guanyl-nucleotide exchange factor activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005851 eukaryotic translation initiation factor 2B complex CC
GO:0006412 translation BP
GO:0006413 translational initiation BP
GO:0006518 peptide metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007166 cell surface receptor signaling pathway BP
GO:0007275 multicellular organism development BP
GO:0007399 nervous system development BP
GO:0007417 central nervous system development BP
GO:0007420 brain development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009266 response to temperature stimulus BP
GO:0009408 response to heat BP
GO:0009628 response to abiotic stimulus BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009743 response to carbohydrate BP
GO:0009746 response to hexose BP
GO:0009749 response to glucose BP
GO:0009987 cellular process BP
GO:0010001 glial cell differentiation BP
GO:0010033 response to organic substance BP
GO:0010243 response to organonitrogen compound BP
GO:0010467 gene expression BP
GO:0014003 oligodendrocyte development BP
GO:0019538 protein metabolic process BP
GO:0019899 enzyme binding MF
GO:0021537 telencephalon development BP
GO:0021543 pallium development BP
GO:0021761 limbic system development BP
GO:0021766 hippocampus development BP
GO:0021782 glial cell development BP
GO:0022008 neurogenesis BP
GO:0023052 signaling BP
GO:0030154 cell differentiation BP
GO:0030900 forebrain development BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032991 protein-containing complex CC
GO:0034284 response to monosaccharide BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0042063 gliogenesis BP
GO:0042221 response to chemical BP
GO:0043043 peptide biosynthetic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043434 response to peptide hormone BP
GO:0043603 amide metabolic process BP
GO:0043604 amide biosynthetic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0048468 cell development BP
GO:0048513 animal organ development BP
GO:0048518 positive regulation of biological process BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0048709 oligodendrocyte differentiation BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050776 regulation of immune response BP
GO:0050778 positive regulation of immune response BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050851 antigen receptor-mediated signaling pathway BP
GO:0050852 T cell receptor signaling pathway BP
GO:0050896 response to stimulus BP
GO:0051020 GTPase binding MF
GO:0051716 cellular response to stimulus BP
GO:0060322 head development BP
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0071704 organic substance metabolic process BP
GO:0098772 molecular function regulator activity MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901652 response to peptide BP
GO:1901698 response to nitrogen compound BP
GO:1901700 response to oxygen-containing compound BP