PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Potrx054352g00010 View in Genome Browser
Position	Potrx054352:1631-2032 (-) 401bp
Gene Type	gene
Gene Description (Protein Product)	Ocs element-binding factor
Organism	Populus tremula x Populus tremuloides
Also AS	Potri.002G031900AT1G75390Potri.002G031900.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Potrx065950g00010 Ocs element-binding factor Potrx054352g00010 Ocs element-binding factor Potrx062638g00010 Light-inducible protein
Regulatory gene	Potrx000925g00010 Dof zinc finger protein Potrx002761g00010 Dof zinc finger protein Potrx003196g00020 transcription factor
Target gene	Potrx000034g00010 ACT domain Potrx000072g00010 Digalactosyldiacylglycerol synthase 1 Potrx000113g00010 acyl-CoA-binding domain-containing protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC