Basic Information
Gene ID
gene-LOC103965739
Position
NW_025999657.1:40210-51933 (-)
11723bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the adaptor complexes medium subunit family
Organism
Also AS MD06G1032900AT5G46630

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125479787 Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
gene-LOC125479163 Belongs to the adaptor complexes small subunit family
gene-LOC125478710 Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond
Regulatory gene
gene-LOC103926593 Myb-related protein
gene-LOC103926634 SANT SWI3; ADA2; N-CoR and TFIIIB'' DNA-binding domains
gene-LOC103926744 lysine-specific demethylase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map04144 Endocytosis Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.