Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
gene-IMY05_C4431000100
View in Genome Browser
Position
JAEQKX010000654.1:16722-17437 (+)
715bp
Gene Type
gene
Gene Description (Protein Product)
"ARF-like small GTPases; ARF
Organism
Salix suchowensis
Also AS AT3G62290

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-IMY05_C4912000400 Sec7 domain
gene-IMY05_C4640000200 GTP-binding protein
gene-IMY05_C4912000300 Domain of unknown function (DUF1981)

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000139 Golgi membrane CC
GO:0000166 nucleotide binding MF
GO:0000278 mitotic cell cycle BP
GO:0000281 mitotic cytokinesis BP
GO:0000282 cellular bud site selection BP
GO:0000910 cytokinesis BP
GO:0000935 division septum CC
GO:0001558 regulation of cell growth BP
GO:0001882 nucleoside binding MF
GO:0001883 purine nucleoside binding MF
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003729 mRNA binding MF
GO:0003824 catalytic activity MF
GO:0003924 GTPase activity MF
GO:0005488 binding MF
GO:0005525 GTP binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005794 Golgi apparatus CC
GO:0005829 cytosol CC
GO:0005933 cellular bud CC
GO:0005934 cellular bud tip CC
GO:0005935 cellular bud neck CC
GO:0005938 cell cortex CC
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport BP
GO:0006897 endocytosis BP
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007015 actin filament organization BP
GO:0007049 cell cycle BP
GO:0007154 cell communication BP
GO:0007163 establishment or maintenance of cell polarity BP
GO:0007165 signal transduction BP
GO:0007264 small GTPase mediated signal transduction BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008360 regulation of cell shape BP
GO:0009889 regulation of biosynthetic process BP
GO:0009891 positive regulation of biosynthetic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010511 regulation of phosphatidylinositol biosynthetic process BP
GO:0010513 positive regulation of phosphatidylinositol biosynthetic process BP
GO:0010562 positive regulation of phosphorus metabolic process BP
GO:0012505 endomembrane system CC
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016192 vesicle-mediated transport BP
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0017076 purine nucleotide binding MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0019001 guanyl nucleotide binding MF
GO:0019216 regulation of lipid metabolic process BP
GO:0019220 regulation of phosphate metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0022402 cell cycle process BP
GO:0022603 regulation of anatomical structure morphogenesis BP
GO:0022604 regulation of cell morphogenesis BP
GO:0022607 cellular component assembly BP
GO:0023052 signaling BP
GO:0030010 establishment of cell polarity BP
GO:0030029 actin filament-based process BP
GO:0030036 actin cytoskeleton organization BP
GO:0030234 enzyme regulator activity MF
GO:0030307 positive regulation of cell growth BP
GO:0030427 site of polarized growth CC
GO:0030428 cell septum CC
GO:0030447 filamentous growth BP
GO:0031090 organelle membrane CC
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031328 positive regulation of cellular biosynthetic process BP
GO:0031984 organelle subcompartment CC
GO:0032153 cell division site CC
GO:0032155 obsolete cell division site part CC
GO:0032549 ribonucleoside binding MF
GO:0032550 purine ribonucleoside binding MF
GO:0032553 ribonucleotide binding MF
GO:0032555 purine ribonucleotide binding MF
GO:0032561 guanyl ribonucleotide binding MF
GO:0033036 macromolecule localization BP
GO:0034613 protein localization BP
GO:0035556 intracellular signal transduction BP
GO:0035639 purine ribonucleoside triphosphate binding MF
GO:0036094 small molecule binding MF
GO:0036267 invasive filamentous growth BP
GO:0040007 growth BP
GO:0040008 regulation of growth BP
GO:0042886 amide transport BP
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044085 cellular component biogenesis BP
GO:0044182 filamentous growth of a population of unicellular organisms BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044448 obsolete cell cortex part CC
GO:0044464 obsolete cell part CC
GO:0045184 establishment of protein localization BP
GO:0045834 positive regulation of lipid metabolic process BP
GO:0045927 positive regulation of growth BP
GO:0045937 positive regulation of phosphate metabolic process BP
GO:0046889 positive regulation of lipid biosynthetic process BP
GO:0046890 regulation of lipid biosynthetic process BP
GO:0046907 intracellular transport BP
GO:0048193 Golgi vesicle transport BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048638 regulation of developmental growth BP
GO:0048639 positive regulation of developmental growth BP
GO:0050789 regulation of biological process BP
GO:0050790 regulation of catalytic activity BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051017 actin filament bundle assembly BP
GO:0051094 positive regulation of developmental process BP
GO:0051128 regulation of cellular component organization BP
GO:0051130 positive regulation of cellular component organization BP
GO:0051174 regulation of phosphorus metabolic process BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051285 cell cortex of cell tip CC
GO:0051286 cell tip CC
GO:0051301 cell division BP
GO:0051510 regulation of unidimensional cell growth BP
GO:0051512 positive regulation of unidimensional cell growth BP
GO:0051516 regulation of bipolar cell growth BP
GO:0051518 positive regulation of bipolar cell growth BP
GO:0051519 activation of bipolar cell growth BP
GO:0051523 cell growth mode switching, monopolar to bipolar BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0051666 actin cortical patch localization BP
GO:0051716 cellular response to stimulus BP
GO:0061171 establishment of bipolar cell polarity BP
GO:0061389 regulation of direction of cell growth BP
GO:0061572 actin filament bundle organization BP
GO:0061640 cytoskeleton-dependent cytokinesis BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0065009 regulation of molecular function BP
GO:0070727 cellular macromolecule localization BP
GO:0070783 growth of unicellular organism as a thread of attached cells BP
GO:0071071 regulation of phospholipid biosynthetic process BP
GO:0071073 positive regulation of phospholipid biosynthetic process BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0080090 regulation of primary metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0097367 carbohydrate derivative binding MF
GO:0097435 supramolecular fiber organization BP
GO:0098588 bounding membrane of organelle CC
GO:0098657 import into cell BP
GO:0098772 molecular function regulator activity MF
GO:0098791 Golgi apparatus subcompartment CC
GO:0099568 cytoplasmic region CC
GO:0099738 cell cortex region CC
GO:1901265 nucleoside phosphate binding MF
GO:1901363 heterocyclic compound binding MF
GO:1903047 mitotic cell cycle process BP
GO:1903725 regulation of phospholipid metabolic process BP
GO:1903727 positive regulation of phospholipid metabolic process BP
KEGG Term Name Description
map04144 Endocytosis Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.