PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	gene-IMY05_C4636000300 View in Genome Browser
Position	JAEQKX010000829.1:27021-28886 (-) 1865bp
Gene Type	gene
Gene Description (Protein Product)	Glyceraldehyde-3-phosphate dehydrogenase
Organism	Salix suchowensis
Also AS	AT1G13440

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-IMY05_C4651000400 Enolase, C-terminal TIM barrel domain

gene-IMY05_C5199000200 Belongs to the eukaryotic ribosomal protein eS1 family

gene-IMY05_C4636000300 Glyceraldehyde-3-phosphate dehydrogenase

Load All Networks

Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0001932	regulation of protein phosphorylation	BP
GO:0001934	positive regulation of protein phosphorylation	BP
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003682	chromatin binding	MF
GO:0003723	RNA binding	MF
GO:0003824	catalytic activity	MF
GO:0004365	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005576	extracellular region	CC
GO:0005618	cell wall	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0005811	lipid droplet	CC
GO:0005829	cytosol	CC
GO:0005886	plasma membrane	CC
GO:0005975	carbohydrate metabolic process	BP
GO:0005996	monosaccharide metabolic process	BP
GO:0006006	glucose metabolic process	BP
GO:0006007	glucose catabolic process	BP
GO:0006082	organic acid metabolic process	BP
GO:0006090	pyruvate metabolic process	BP
GO:0006091	generation of precursor metabolites and energy	BP
GO:0006094	gluconeogenesis	BP
GO:0006096	glycolytic process	BP
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006163	purine nucleotide metabolic process	BP
GO:0006164	purine nucleotide biosynthetic process	BP
GO:0006165	nucleoside diphosphate phosphorylation	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006732	obsolete coenzyme metabolic process	BP
GO:0006733	obsolete oxidoreduction coenzyme metabolic process	BP
GO:0006734	NADH metabolic process	BP
GO:0006735	NADH regeneration	BP
GO:0006753	nucleoside phosphate metabolic process	BP
GO:0006754	ATP biosynthetic process	BP
GO:0006757	ATP generation from ADP	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006810	transport	BP
GO:0006915	apoptotic process	BP
GO:0006950	response to stress	BP
GO:0006970	response to osmotic stress	BP
GO:0006979	response to oxidative stress	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008219	cell death	BP
GO:0009056	catabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009108	obsolete coenzyme biosynthetic process	BP
GO:0009117	nucleotide metabolic process	BP
GO:0009123	nucleoside monophosphate metabolic process	BP
GO:0009124	nucleoside monophosphate biosynthetic process	BP
GO:0009126	purine nucleoside monophosphate metabolic process	BP
GO:0009127	purine nucleoside monophosphate biosynthetic process	BP
GO:0009132	nucleoside diphosphate metabolic process	BP
GO:0009135	purine nucleoside diphosphate metabolic process	BP
GO:0009141	nucleoside triphosphate metabolic process	BP
GO:0009142	nucleoside triphosphate biosynthetic process	BP
GO:0009144	purine nucleoside triphosphate metabolic process	BP
GO:0009145	purine nucleoside triphosphate biosynthetic process	BP
GO:0009150	purine ribonucleotide metabolic process	BP
GO:0009152	purine ribonucleotide biosynthetic process	BP
GO:0009156	ribonucleoside monophosphate biosynthetic process	BP
GO:0009161	ribonucleoside monophosphate metabolic process	BP
GO:0009165	nucleotide biosynthetic process	BP
GO:0009166	nucleotide catabolic process	BP
GO:0009167	purine ribonucleoside monophosphate metabolic process	BP
GO:0009168	purine ribonucleoside monophosphate biosynthetic process	BP
GO:0009179	purine ribonucleoside diphosphate metabolic process	BP
GO:0009185	ribonucleoside diphosphate metabolic process	BP
GO:0009199	ribonucleoside triphosphate metabolic process	BP
GO:0009201	ribonucleoside triphosphate biosynthetic process	BP
GO:0009205	purine ribonucleoside triphosphate metabolic process	BP
GO:0009206	purine ribonucleoside triphosphate biosynthetic process	BP
GO:0009259	ribonucleotide metabolic process	BP
GO:0009260	ribonucleotide biosynthetic process	BP
GO:0009277	fungal-type cell wall	CC
GO:0009435	NAD biosynthetic process	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009893	positive regulation of metabolic process	BP
GO:0009966	regulation of signal transduction	BP
GO:0009967	positive regulation of signal transduction	BP
GO:0009987	cellular process	BP
GO:0010562	positive regulation of phosphorus metabolic process	BP
GO:0010604	positive regulation of macromolecule metabolic process	BP
GO:0010646	regulation of cell communication	BP
GO:0010647	positive regulation of cell communication	BP
GO:0012501	programmed cell death	BP
GO:0015886	heme transport	BP
GO:0016020	membrane	CC
GO:0016051	carbohydrate biosynthetic process	BP
GO:0016052	carbohydrate catabolic process	BP
GO:0016053	organic acid biosynthetic process	BP
GO:0016310	phosphorylation	BP
GO:0016491	oxidoreductase activity	MF
GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	MF
GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	MF
GO:0017144	xenobiotic metabolic process	BP
GO:0018130	heterocycle biosynthetic process	BP
GO:0019220	regulation of phosphate metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0019318	hexose metabolic process	BP
GO:0019319	hexose biosynthetic process	BP
GO:0019320	hexose catabolic process	BP
GO:0019359	nicotinamide nucleotide biosynthetic process	BP
GO:0019362	pyridine nucleotide metabolic process	BP
GO:0019363	pyridine nucleotide biosynthetic process	BP
GO:0019438	aromatic compound biosynthetic process	BP
GO:0019439	aromatic compound catabolic process	BP
GO:0019637	organophosphate metabolic process	BP
GO:0019674	NAD metabolic process	BP
GO:0019693	ribose phosphate metabolic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0023051	regulation of signaling	BP
GO:0023056	positive regulation of signaling	BP
GO:0030312	external encapsulating structure	CC
GO:0031323	regulation of cellular metabolic process	BP
GO:0031325	positive regulation of cellular metabolic process	BP
GO:0031399	regulation of protein modification process	BP
GO:0031401	positive regulation of protein modification process	BP
GO:0032268	regulation of protein metabolic process	BP
GO:0032270	positive regulation of protein metabolic process	BP
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0032872	regulation of stress-activated MAPK cascade	BP
GO:0032874	positive regulation of stress-activated MAPK cascade	BP
GO:0032991	protein-containing complex	CC
GO:0033554	cellular response to stress	BP
GO:0034404	nucleobase-containing small molecule biosynthetic process	BP
GO:0034599	cellular response to oxidative stress	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034654	nucleobase-containing compound biosynthetic process	BP
GO:0034655	nucleobase-containing compound catabolic process	BP
GO:0035690	cellular response to xenobiotic stimulus	BP
GO:0042221	response to chemical	BP
GO:0042325	regulation of phosphorylation	BP
GO:0042327	positive regulation of phosphorylation	BP
GO:0042493	response to xenobiotic stimulus	BP
GO:0042866	pyruvate biosynthetic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043408	regulation of MAPK cascade	BP
GO:0043410	positive regulation of MAPK cascade	BP
GO:0043436	oxoacid metabolic process	BP
GO:0043891	glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity	MF
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044270	cellular nitrogen compound catabolic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044282	small molecule catabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0045937	positive regulation of phosphate metabolic process	BP
GO:0046031	ADP metabolic process	BP
GO:0046034	ATP metabolic process	BP
GO:0046364	monosaccharide biosynthetic process	BP
GO:0046365	monosaccharide catabolic process	BP
GO:0046390	ribose phosphate biosynthetic process	BP
GO:0046394	carboxylic acid biosynthetic process	BP
GO:0046434	organophosphate catabolic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0046496	nicotinamide nucleotide metabolic process	BP
GO:0046700	heterocycle catabolic process	BP
GO:0046939	nucleotide phosphorylation	BP
GO:0048518	positive regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0048583	regulation of response to stimulus	BP
GO:0048584	positive regulation of response to stimulus	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051173	positive regulation of nitrogen compound metabolic process	BP
GO:0051174	regulation of phosphorus metabolic process	BP
GO:0051179	localization	BP
GO:0051181	obsolete cofactor transport	BP
GO:0051186	obsolete cofactor metabolic process	BP
GO:0051188	obsolete cofactor biosynthetic process	BP
GO:0051234	establishment of localization	BP
GO:0051246	regulation of protein metabolic process	BP
GO:0051247	positive regulation of protein metabolic process	BP
GO:0051716	cellular response to stimulus	BP
GO:0055086	nucleobase-containing small molecule metabolic process	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0061615	glycolytic process through fructose-6-phosphate	BP
GO:0061620	glycolytic process through glucose-6-phosphate	BP
GO:0061621	canonical glycolysis	BP
GO:0061718	glucose catabolic process to pyruvate	BP
GO:0065007	biological regulation	BP
GO:0070302	regulation of stress-activated protein kinase signaling cascade	BP
GO:0070304	positive regulation of stress-activated protein kinase signaling cascade	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0070994	detection of oxidative stress	BP
GO:0071214	cellular response to abiotic stimulus	BP
GO:0071470	cellular response to osmotic stress	BP
GO:0071702	organic substance transport	BP
GO:0071704	organic substance metabolic process	BP
GO:0071705	nitrogen compound transport	BP
GO:0071944	cell periphery	CC
GO:0072330	monocarboxylic acid biosynthetic process	BP
GO:0072521	purine-containing compound metabolic process	BP
GO:0072522	purine-containing compound biosynthetic process	BP
GO:0072524	pyridine-containing compound metabolic process	BP
GO:0072525	pyridine-containing compound biosynthetic process	BP
GO:0072593	reactive oxygen species metabolic process	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0080134	regulation of response to stress	BP
GO:0080135	regulation of cellular response to stress	BP
GO:0090407	organophosphate biosynthetic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:0104004	cellular response to environmental stimulus	BP
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901137	carbohydrate derivative biosynthetic process	BP
GO:1901292	nucleoside phosphate catabolic process	BP
GO:1901293	nucleoside phosphate biosynthetic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901361	organic cyclic compound catabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901363	heterocyclic compound binding	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901575	organic substance catabolic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901678	iron coordination entity transport	BP
GO:1902531	regulation of intracellular signal transduction	BP
GO:1902533	positive regulation of intracellular signal transduction	BP
GO:1990315	Mcs4 RR-MAPKKK complex	CC
GO:1990841	promoter-specific chromatin binding	MF

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00710	Carbon fixation in photosynthetic organisms	-
map00010	Glycolysis / Gluconeogenesis	Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which often corresponds to operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].