MORF2 - Plant Editosome Database - BIG Data Center

Summary

Editing Factor: MORF2
Synonym: DAL, DAL1, DIFFERENTIATION AND GREENING-LIKE, DIFFERENTIATION AND GREENING-LIKE 1, MULTIPLE ORGANELLAR RNA EDITING FACTOR 2
Description: Encodes an editing factor involved at almost all RNA editing sites in chloroplasts.
Protein Family: MORF/RIP
Subclass: NA
Construct Structure: NA
Gene ID & Species: AT2G33430 (Arabidopsis thaliana)
Edited Gene(s): ndhB    ndhD    psbE    psbF    atpF    clpP    accD    matK    ndhF    ndhG    petL    rpoB    rps14    rpoA    psbZ    rps12    rpl23    rpoC1
Editing Type(s): C-to-U (109)
Publication(s): [1] GUN1 interacts with MORF2 to regulate plastid RNA editing during retrograde signaling, PNAS, 2019. [PMID=30988197]
[2] Multiple organellar RNA editing factor (MORF) family proteins are required for RNA editing in mitochondria and plastids of plants, PNAS, 2012. [PMID=22411807]

Editing Details

Species Gene ID Organelle Edited Gene Position Region Editing Type Codon Amino Acid Molecular Effect Experiment Details
Arabidopsis thaliana AT2G33430 Chloroplast accD 794 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_094930Cmorf2-1T-DNA InsertionNAHomozygousStay whiteLeafNADirect Sequencing of PCR Products4.00%PoorDecreased22411807
ColWTNo treatmentNo treatmentNo treatmentNo treatmentLeafNADirect Sequencing of PCR Products89.00%HighNone22411807
Arabidopsis thaliana AT2G33430 Chloroplast accD 58642 3'UTR C-to-U NA=>NA NA=>NA NA
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_094930Cmorf2-1T-DNA InsertionNAHomozygousStay whiteLeafNADirect Sequencing of PCR Products40.00%MediumIncreased22411807
ColWTNo treatmentNo treatmentNo treatmentNo treatmentLeafNADirect Sequencing of PCR Products20.00%LowNone22411807
Arabidopsis thaliana AT2G33430 Chloroplast atpF 92 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_094930Cmorf2-1T-DNA InsertionNAHomozygousStay whiteLeafNADirect Sequencing of PCR Products10.00%PoorDecreased22411807
ColWTNo treatmentNo treatmentNo treatmentNo treatmentLeafNADirect Sequencing of PCR Products100.00%CompleteNone22411807
Arabidopsis thaliana AT2G33430 Chloroplast
Plastid
clpP 559 CDS C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
SALK_094930Cmorf2-1T-DNA InsertionNAHomozygousStay whiteLeafNADirect Sequencing of PCR Products60.00%HighDecreased22411807
ColWTNo treatmentNo treatmentNo treatmentNo treatmentLeafNADirect Sequencing of PCR Products80.00%HighNone22411807
Col6-3Col6-3NF treatmentA bleaching herbicide norflurazon (NF) treatmentNull alleleNASeedlingsNADirect Sequencing of PCR Products 55.00%MediumNone30988197
Col6-3gun1-9NF treatmentA bleaching herbicide norflurazon (NF) treatmentNull alleleNASeedlingsNADirect Sequencing of PCR Products 68.00%HighNone30988197
Col6-3gun1-8NF treatmentA bleaching herbicide norflurazon (NF) treatment