| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
accD
|
794 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
57868 |
C-to-U |
UCG=>UUG
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 4.00% | Poor | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 89.00% | High | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 82.35% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 82.35% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 50.00% | Medium | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 80.00% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 90.00% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
accD
|
NA |
3'UTR |
NA
TAIR10 |
NA |
Genomic position |
58642 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 40.00% | Medium | Increased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 20.00% | Low | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 50.00% | Medium | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 72.22% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 50.00% | Medium | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 54.17% | Medium | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 83.12% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
atpF
|
92 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
12707 |
C-to-U |
CCA=>CUA
NA=>NA |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 10.00% | Poor | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 100.00% | Complete | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 88.60% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 89.62% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 84.00% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 86.79% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 91.20% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast
Plastid |
clpP
|
559 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
69942 |
C-to-U |
CAU=>UAU
NA=>NA |
H=>Y |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 60.00% | High | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 80.00% | High | None | 22411807 | | Col6-3 | Col6-3 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | NULL | NA | Seedling | NA | Direct Sequencing of PCR Products | 55.00% | Medium | None | 30988197 | | Col6-3 | gun1-9 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 68.00% | High | None | 30988197 | | Col6-3 | gun1-8 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 65.00% | High | None | 30988197 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 79.00% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 76.41% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 74.94% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 78.52% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 73.46% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
matK
|
706 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
293167 |
C-to-U |
CAU=>UAU
NA=>NA |
H=>Y |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 45.00% | Medium | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 70.00% | High | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 69.70% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 60.10% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 65.77% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 77.03% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 77.21% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
ndhB
|
1255 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
95225 |
C-to-U |
CAU=>UAU
NA=>NA |
H=>Y |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 10.00% | Poor | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 100.00% | Complete | None | 22411807 | | Columbia (Col-0) | WT + Dex (5 μM) | Control | Control | No mutant | Normal | Seedling | 7-d-old | Sequencing amplified PCR fragments | 90.00% | High | None | 37056496 | | Columbia (Col-0) | P1-12 + Dex (5 μM) | Treated with Dex | Treated with 5 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 50.00% | Medium | Decreased | 37056496 | | Columbia (Col-0) | P1-10 + Dex (5 μM) | Treated with Dex | Treated with 5 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 90.20% | High | Similar | 37056496 | | Columbia (Col-0) | P1-54 + Dex (5 μM) | Treated with Dex | Treated with 5 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 23.21% | Low | Decreased | 37056496 | | Columbia (Col-0) | P1-12 + Dex (0.25 μM) | Treated with Dex | Treated with 0.25 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 91.23% | High | Similar | 37056496 | | SALK_094930 | morf2-2 | T-DNA insertion | T-DNA insertion in an intron | Homozygous | Retarded embryo development and disrupted embryo structures that led to varied seedling morphology upon germination | Seedling | 7-d-old | Sequencing amplified PCR fragments | 0.00% | Unedited | Absent | 37056496 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 98.29% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 93.75% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 93.38% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 97.62% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 91.50% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
ndhB
|
1481 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
94999 |
C-to-U |
CCA=>CUA
NA=>NA |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 10.00% | Poor | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 100.00% | Complete | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 86.15% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 87.03% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 93.59% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 83.22% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 83.47% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
ndhB
|
149 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
97016 |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 0.00% | Unedited | Absent | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 90.00% | High | None | 22411807 | | Columbia (Col-0) | WT + Dex (5 μM) | Control | Control | No mutant | Normal | Seedling | 7-d-old | Sequencing amplified PCR fragments | 90.16% | High | None | 37056496 | | Columbia (Col-0) | P1-12 + Dex (5 μM) | Treated with Dex | Treated with 5 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 30.16% | Low | Decreased | 37056496 | | Columbia (Col-0) | P1-10 + Dex (5 μM) | Treated with Dex | Treated with 5 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 87.10% | High | Similar | 37056496 | | Columbia (Col-0) | P1-54 + Dex (5 μM) | Treated with Dex | Treated with 5 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 73.68% | High | Decreased | 37056496 | | Columbia (Col-0) | P1-12 + Dex (0.25 μM) | Treated with Dex | Treated with 0.25 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 86.67% | High | Similar | 37056496 | | SALK_094930 | morf2-2 | T-DNA insertion | T-DNA insertion in an intron | Homozygous | Retarded embryo development and disrupted embryo structures that led to varied seedling morphology upon germination | Seedling | 7-d-old | Sequencing amplified PCR fragments | 0.00% | Unedited | Absent | 37056496 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 86.02% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 79.03% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 77.61% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 79.53% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 62.31% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast
Plastid |
ndhB
|
467 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
96698 |
C-to-U |
CCA=>CUA
NA=>NA |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 5.00% | Poor | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 90.00% | High | None | 22411807 | | Col6-3 | Col6-3 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | NULL | NA | Seedling | NA | Direct Sequencing of PCR Products | 20.00% | Low | None | 30988197 | | Col6-3 | gun1-9 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 75.00% | High | None | 30988197 | | Col6-3 | gun1-8 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 75.00% | High | None | 30988197 | | Col6-3 | MORF2OX | NF treatment; Overexpression | A bleaching herbicide norflurazon (NF) treatment. MORF2 is overexpressed and fused with 3xHA-3xFLAG tags in the wild-type Col6-3 background. | NULL | Seedling is pale and die | Seedling | NA | Direct Sequencing of PCR Products | 15.00% | Poor | NA | 30988197 | | Columbia (Col-0) | WT + Dex (5 μM) | Control | Control | No mutant | Normal | Seedling | 7-d-old | Sequencing amplified PCR fragments | 92.16% | High | None | 37056496 | | Columbia (Col-0) | P1-12 + Dex (5 μM) | Treated with Dex | Treated with 5 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 14.55% | Poor | Decreased | 37056496 | | Columbia (Col-0) | P1-10 + Dex (5 μM) | Treated with Dex | Treated with 5 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 87.27% | High | Similar | 37056496 | | Columbia (Col-0) | P1-54 + Dex (5 μM) | Treated with Dex | Treated with 5 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 90.91% | High | Similar | 37056496 | | Columbia (Col-0) | P1-12 + Dex (0.25 μM) | Treated with Dex | Treated with 0.25 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 84.91% | High | Similar | 37056496 | | SALK_094930 | morf2-2 | T-DNA insertion | T-DNA insertion in an intron | Homozygous | Retarded embryo development and disrupted embryo structures that led to varied seedling morphology upon germination | Seedling | 7-d-old | Sequencing amplified PCR fragments | 0.00% | Unedited | Absent | 37056496 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 82.86% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 81.03% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 79.79% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 82.95% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 78.95% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
ndhB
|
586 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
96579 |
C-to-U |
CAU=>UAU
NA=>NA |
H=>Y |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 20.00% | Low | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 100.00% | Complete | None | 22411807 | | Columbia (Col-0) | WT + Dex (5 μM) | Control | Control | No mutant | Normal | Seedling | 7-d-old | Sequencing amplified PCR fragments | 100.00% | Complete | None | 37056496 | | Columbia (Col-0) | P1-12 + Dex (5 μM) | Treated with Dex | Treated with 5 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 13.73% | Poor | Decreased | 37056496 | | Columbia (Col-0) | P1-10 + Dex (5 μM) | Treated with Dex | Treated with 5 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 100.00% | Complete | Similar | 37056496 | | Columbia (Col-0) | P1-54 + Dex (5 μM) | Treated with Dex | Treated with 5 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 100.00% | Complete | Similar | 37056496 | | Columbia (Col-0) | P1-12 + Dex (0.25 μM) | Treated with Dex | Treated with 0.25 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 100.00% | Complete | Similar | 37056496 | | SALK_094930 | morf2-2 | T-DNA insertion | T-DNA insertion in an intron | Homozygous | Retarded embryo development and disrupted embryo structures that led to varied seedling morphology upon germination | Seedling | 7-d-old | Sequencing amplified PCR fragments | 6.74% | Poor | Decreased | 37056496 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 89.32% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 84.54% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 83.03% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 88.70% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 87.36% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
ndhB
|
746 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
96419 |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 50.00% | Medium | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 100.00% | Complete | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 86.09% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 88.72% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 85.71% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 88.85% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 85.39% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
ndhB
|
830 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
95650 |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 0.00% | Unedited | Absent | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 100.00% | Complete | None | 22411807 | | Columbia (Col-0) | WT + Dex (5 μM) | Control | Control | No mutant | Normal | Seedling | 7-d-old | Sequencing amplified PCR fragments | 100.00% | Complete | None | 37056496 | | Columbia (Col-0) | P1-12 + Dex (5 μM) | Treated with Dex | Treated with 5 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 72.73% | High | Decreased | 37056496 | | Columbia (Col-0) | P1-10 + Dex (5 μM) | Treated with Dex | Treated with 5 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 100.00% | Complete | Similar | 37056496 | | Columbia (Col-0) | P1-54 + Dex (5 μM) | Treated with Dex | Treated with 5 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 100.00% | Complete | Similar | 37056496 | | Columbia (Col-0) | P1-12 + Dex (0.25 μM) | Treated with Dex | Treated with 0.25 μM Dex | NA | NA | Seedling | 7-d-old | Sequencing amplified PCR fragments | 100.00% | Complete | Similar | 37056496 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 90.02% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 90.74% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 87.70% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 84.08% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 84.57% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast
Plastid |
ndhB
|
836 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
95644 |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 0.00% | Unedited | Absent | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 100.00% | Complete | None | 22411807 | | Col6-3 | Col6-3 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | NULL | NA | Seedling | NA | Direct Sequencing of PCR Products | 40.00% | Medium | None | 30988197 | | Col6-3 | gun1-9 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 70.00% | High | None | 30988197 | | Col6-3 | gun1-8 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 60.00% | High | None | 30988197 | | Col6-3 | MORF2OX | NF treatment; Overexpression | A bleaching herbicide norflurazon (NF) treatment | NULL | Seedling is pale and die | Seedling | NA | Direct Sequencing of PCR Products | 10.00% | Poor | NA | 30988197 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 79.44% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 85.59% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 78.06% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 73.46% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 65.45% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
ndhB
|
872 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
95608 |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 0.00% | Unedited | Absent | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 85.00% | High | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 86.68% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 81.52% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 82.91% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 77.73% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 87.12% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
ndhD
|
2 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
117166 |
C-to-U |
ACG=>AUG
NA=>NA |
T=>M |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 0.00% | Unedited | Absent | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 45.00% | Medium | None | 22411807 | | NA | WT | Wild Type | Wild Type | No mutant | Normal | NA | NA | NA | NA | NA | NA | 30471730 | | Columbia (Col-0) | ProMORF2: MORF2-4xMYC | Arabidopsis Col-0 transgenic plants expressing MORF2-4xMYC. | To obtain MYC-tagged transgenic plants for MORF2 analysis, constructs expressing genes encoding MORF2-4xMYC fusion proteins, driven by the corresponding native promoters were transformed into wild-typ | NA | Normal | NA | NA | NA | NA | NA | NA | 30471730 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 22.83% | Low | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 29.07% | Low | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 27.87% | Low | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 21.10% | Low | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 12.87% | Poor | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
ndhD
|
383 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
116785 |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 50.00% | Medium | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 90.00% | High | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 74.22% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 56.57% | Medium | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 53.85% | Medium | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 69.07% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 83.70% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
ndhD
|
674 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
116494 |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 50.00% | Medium | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 80.00% | High | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 74.32% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 62.50% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 58.72% | Medium | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 79.79% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 80.14% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast
Plastid |
ndhD
|
878 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
116290 |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 0.00% | Unedited | Absent | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 80.00% | High | None | 22411807 | | Col6-3 | Col6-3 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | NULL | NA | Seedling | NA | Direct Sequencing of PCR Products | 60.00% | High | None | 30988197 | | Col6-3 | gun1-9 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 78.00% | High | None | 30988197 | | Col6-3 | gun1-8 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 75.00% | High | None | 30988197 | | Col6-3 | MORF2OX | NF treatment; Overexpression | A bleaching herbicide norflurazon (NF) treatment | NULL | Seedling is pale and die | Seedling | NA | Direct Sequencing of PCR Products | 20.00% | Low | NA | 30988197 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 62.91% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 53.91% | Medium | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 73.25% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 69.09% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 74.32% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
ndhD
|
887 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
116281 |
C-to-U |
CCC=>CUC
NA=>NA |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 5.00% | Poor | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 100.00% | Complete | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 69.27% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 64.60% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 77.42% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 72.90% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 78.24% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast
Plastid |
ndhF
|
290 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
112235 |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 0.00% | Unedited | Absent | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 100.00% | Complete | None | 22411807 | | Col6-3 | Col6-3 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | NULL | NA | Seedling | NA | Direct Sequencing of PCR Products | 75.00% | High | None | 30988197 | | Col6-3 | gun1-9 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 60.00% | High | None | 30988197 | | Col6-3 | gun1-8 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 70.00% | High | None | 30988197 | | Col6-3 | MORF2OX | NF treatment; Overexpression | A bleaching herbicide norflurazon (NF) treatment | NULL | Seedling is pale and die | Seedling | NA | Direct Sequencing of PCR Products | 10.00% | Poor | NA | 30988197 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 4.70% | Poor | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 4.85% | Poor | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 4.00% | Poor | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 7.52% | Poor | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 12.38% | Poor | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
ndhG
|
50 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
118858 |
C-to-U |
UCC=>UUC
NA=>NA |
S=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 40.00% | Medium | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 100.00% | Complete | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 70.18% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 72.52% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 75.86% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 60.00% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 73.42% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
petL
|
5 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
65716 |
C-to-U |
CCU=>CUU
NA=>NA |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 65.00% | High | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 100.00% | Complete | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 43.64% | Medium | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 26.00% | Low | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 42.25% | Medium | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 53.57% | Medium | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 71.43% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
psbE
|
214 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
64109 |
C-to-U |
CCU=>UCU
NA=>NA |
P=>S |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 30.00% | Low | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 100.00% | Complete | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 99.42% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 99.50% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 99.26% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 97.73% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 95.45% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
psbF
|
65 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 0.00% | Unedited | Absent | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 100.00% | Complete | None | 22411807 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
psbF
|
77 |
CDS |
TAIR10 |
NA |
Genomic position |
63985 |
C-to-U |
NA=>NA |
S=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 93.17% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 98.12% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 99.26% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 93.04% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 95.63% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast
Plastid |
psbZ
|
50 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
35800 |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 0.00% | Unedited | Absent | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 100.00% | Complete | None | 22411807 | | Col6-3 | Col6-3 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | NULL | NA | Seedling | NA | Direct Sequencing of PCR Products | 92.00% | High | None | 30988197 | | Col6-3 | gun1-9 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 72.00% | High | None | 30988197 | | Col6-3 | gun1-8 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 75.00% | High | None | 30988197 | | Col6-3 | MORF2OX | NF treatment; Overexpression | A bleaching herbicide norflurazon (NF) treatment | NULL | Seedling is pale and die | Seedling | NA | Direct Sequencing of PCR Products | 15.00% | Poor | NA | 30988197 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 80.28% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 76.63% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 76.48% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 76.39% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 66.71% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
rpl23
|
89 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
86055 |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 0.00% | Unedited | Absent | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 70.00% | High | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 91.97% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 92.88% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 91.96% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 91.85% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 95.40% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
rpoA
|
200 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
78691 |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 80.00% | High | Increased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 50.00% | Medium | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 87.75% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 89.06% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 86.41% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 90.18% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 86.94% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast
Plastid |
rpoB
|
2432 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
23898 |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 80.00% | High | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 100.00% | Complete | None | 22411807 | | Col6-3 | Col6-3 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | NULL | NA | Seedling | NA | Direct Sequencing of PCR Products | 90.00% | High | None | 30988197 | | Col6-3 | gun1-9 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 65.00% | High | None | 30988197 | | Col6-3 | gun1-8 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 70.00% | High | None | 30988197 | | Col6-3 | MORF2OX | NF treatment; Overexpression | A bleaching herbicide norflurazon (NF) treatment | NULL | Seedling is pale and die | Seedling | NA | Direct Sequencing of PCR Products | 55.00% | Medium | NA | 30988197 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 91.91% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 93.13% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 85.14% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 95.56% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 93.90% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast
Plastid |
rpoB
|
338 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
25992 |
C-to-U |
UCU=>UUU
NA=>NA |
S=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 70.00% | High | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 90.00% | High | None | 22411807 | | Col6-3 | Col6-3 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | NULL | NA | Seedling | NA | Direct Sequencing of PCR Products | 85.00% | High | None | 30988197 | | Col6-3 | gun1-9 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 60.00% | High | None | 30988197 | | Col6-3 | gun1-8 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 75.00% | High | None | 30988197 | | Col6-3 | MORF2OX | NF treatment; Overexpression | A bleaching herbicide norflurazon (NF) treatment | NULL | Seedling is pale and die | Seedling | NA | Direct Sequencing of PCR Products | 55.00% | Medium | NA | 30988197 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 84.82% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 84.50% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 79.22% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 82.83% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 93.85% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast
Plastid |
rpoB
|
551 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
25779 |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 80.00% | High | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 90.00% | High | None | 22411807 | | Col6-3 | Col6-3 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | NULL | NA | Seedling | NA | Direct Sequencing of PCR Products | 85.00% | High | None | 30988197 | | Col6-3 | gun1-9 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 60.00% | High | None | 30988197 | | Col6-3 | gun1-8 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 70.00% | High | None | 30988197 | | Col6-3 | MORF2OX | NF treatment; Overexpression | A bleaching herbicide norflurazon (NF) treatment | NULL | Seedling is pale and die | Seedling | NA | Direct Sequencing of PCR Products | 25.00% | Low | NA | 30988197 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 94.25% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 92.11% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 90.74% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 91.36% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 95.45% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Plastid
Chloroplast |
rpoC1
|
488 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
21806 |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col6-3 | Col6-3 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | NULL | NA | Seedling | NA | Direct Sequencing of PCR Products | 60.00% | High | None | 30988197 | | Col6-3 | gun1-9 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 25.00% | Low | None | 30988197 | | Col6-3 | gun1-8 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 30.00% | Low | None | 30988197 | | Col6-3 | MORF2OX | NF treatment; Overexpression | A bleaching herbicide norflurazon (NF) treatment | NULL | Seedling is pale and die | Seedling | NA | Direct Sequencing of PCR Products | 40.00% | Medium | NA | 30988197 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 33.33% | Low | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 55.26% | Medium | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 35.56% | Low | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 35.48% | Low | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 32.61% | Low | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Plastid |
rps12
|
58 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
CAA/CAG=>UAA/UAG |
G=>Stop codon |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| Col6-3 | Col6-3 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | NULL | NA | Seedling | NA | Direct Sequencing of PCR Products | 35.00% | Low | None | 30988197 | | Col6-3 | gun1-9 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 50.00% | Medium | None | 30988197 | | Col6-3 | gun1-8 | NF treatment | A bleaching herbicide norflurazon (NF) treatment | Null allele | NA | Seedling | NA | Direct Sequencing of PCR Products | 55.00% | Medium | None | 30988197 | | Col6-3 | MORF2OX | NF treatment; Overexpression | A bleaching herbicide norflurazon (NF) treatment | NULL | Seedling is pale and die | Seedling | NA | Direct Sequencing of PCR Products | 10.00% | Poor | NA | 30988197 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
rps12
|
NA |
Intron |
NA
TAIR10 |
NA |
Genomic position |
69553 |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 15.00% | Poor | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 20.00% | Low | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 13.92% | Poor | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 17.97% | Poor | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 18.25% | Poor | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 20.95% | Low | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 15.50% | Poor | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
rps14
|
149 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
37092 |
C-to-U |
CCA=>CUA
NA=>NA |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 50.00% | Medium | Decreased | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 95.00% | High | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 94.41% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 95.02% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 93.50% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 92.10% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 89.52% | High | None | 37056496 |
|
| Arabidopsis thaliana |
AT2G33430 |
Chloroplast |
rps14
|
80 |
CDS |
NA
TAIR10 |
NA |
NA
Genomic position |
NA
37161 |
C-to-U |
UCA=>UUA
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| SALK_094930C | morf2-1 | T-DNA Insertion | NA | Homozygous | Stay white | Leaf | NA | Direct Sequencing of PCR Products | 0.00% | Unedited | Absent | 22411807 | | Col | WT | Control | Control | Control | Normal | Leaf | NA | Direct Sequencing of PCR Products | 100.00% | Complete | None | 22411807 | | Columbia (Col-0) | KRAB (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 96.27% | High | None | 37056496 | | Columbia (Col-0) | KRAB (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 97.80% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+DMSO) | Treated with DMSO | NA | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 95.29% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.025 mM Dex) | Treated with Dex | Treated with 0.025 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 94.88% | High | None | 37056496 | | Columbia (Col-0) | P1-12 (+0.25 mM Dex) | Treated with Dex | Treated with 0.25 mM Dex | NA | NA | Seedling | 8-d-old | Sequencing amplified PCR fragments | 90.17% | High | None | 37056496 |
|
