accD - Plant Editosome Database - BIG Data Center

Summary

Gene: accD
Function: Acetyl-CoA carboxylase
Species: 63
Editing Factors:22 (DG1, DYW2, ECB2, HEMC, MEF37, MORF2, MORF8, MORF9, ORRM1, ORRM1,ORRM6, ORRM6, OTP90, OZ1, PDM1, PDM2, PGN, QED1, RARE1, SEL1, TSL1, VAC1, YL)
Editing Types:
C-to-U (91)
U-to-C (46)
Editing Events: 154 (C-to-U: 91   U-to-C: 46   NA: 17)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Adiantum capillus-venerisChloroplast1
NA: 1
53836-54768CDS+NANA=>NANA=>NA
Alsophila spinulosaChloroplast1
NA: 1
57032-57964CDS+NANA=>NANA=>NA
Ampelopteris proliferaChloroplast2
C-to-U: 1
U-to-C: 1
54853
55629
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>CAA
T=>M
TERM=>Q
Anthoceros angustusChloroplast27
C-to-U: 14
U-to-C: 13
75119
75146
75203
75231
75281
75366
75387
75408
75417
75450
75480
75501
75525
75564
75594
75639
75647
75654
75699
75707
75708
75726
75749
75761
75801
75825
75855
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
U-to-C
U-to-C
C-to-U
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
U-to-C
U-to-C
C-to-U
C-to-U
C-to-U
U-to-C
UUA=>UCA
CCA=>CUA
UCA=>UUA
CAC=>UAC
ACU=>AUU
UAA=>CAA
UUC=>UCC
UGA=>CGA
ACG=>AUG
UUU=>UCU
UCC=>CCC
UAA=>CAA
UUU=>UCU
AUA=>ACA
CCU=>CUU
UCU=>UUU
ACU=>AUU
UCU=>UUU
ACU=>AUU
ACU=>AUU
UUU=>CUU
UAG=>CAG
UUU=>UCU
UCA=>UUA
CCU=>CUU
UCA=>UUA
UGA=>CGA
L=>S
P=>L
S=>L
H=>Y
T=>I
TERM=>Q
F=>S
TERM=>R
T=>M
F=>S
S=>P
TERM=>Q
F=>S
I=>T
P=>L
S=>F
T=>I
S=>F
T=>I
T=>I
F=>L
TERM=>Q
F=>S
S=>L
P=>L
S=>L
TERM=>R
Arabidopsis lyrata subsp. lyrata MN47Chloroplast1
C-to-U: 1
58069CDS+C-to-UUCG=>UUGS=>L
Arabidopsis thalianaChloroplast4
C-to-U: 4
57869
58642
CDS
3'UTR
3'UTR
CDS
+
NA
C-to-U
C-to-U
C-to-U
C-to-U
UCG=>UUG
NA=>NA
NA=>NA
UCG=>UUG
S=>L
NA=>NA
NA=>NA
S=>L
Asplenium pekinenseChloroplast2
C-to-U: 1
U-to-C: 1
54010
54787
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>UCA
T=>M
TERM=>S
Asplenium prolongatumChloroplast2
C-to-U: 1
U-to-C: 1
53923
54700
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>UCA
T=>M
TERM=>S
Athyrium anisopterumChloroplast1
C-to-U: 1
54442CDS+C-to-UACG=>AUGT=>M
Athyrium opacumChloroplast1
C-to-U: 1
54278CDS+C-to-UACG=>AUGT=>M
Athyrium sheareriChloroplast1
C-to-U: 1
54441CDS+C-to-UACG=>AUGT=>M
Athyrium sinenseChloroplast1
C-to-U: 1
54391CDS+C-to-UACG=>AUGT=>M
Austroblechnum melanocaulonChloroplast1
C-to-U: 1
54454CDS+C-to-UACG=>AUGT=>M
Christella appendiculataChloroplast2
C-to-U: 1
U-to-C: 1
54648
55424
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>CAA
T=>M
TERM=>Q
Cocos nuciferaChloroplast4
C-to-U: 4
57590
57953
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
UCG=>UUG
UCA=>UUA
UCA=>UUA
UCG=>UUG
S=>L
S=>L
S=>L
S=>L
Cuscuta reflexaChloroplast1
C-to-U: 1
49481CDS-C-to-UUCG=>UUGS=>L
Cypripedium macranthosChloroplast2
C-to-U: 2
59427
59631
CDS
CDS
+C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
S=>L
S=>L
Cyrtomium devexiscapulaeChloroplast2
C-to-U: 1
U-to-C: 1
54457
55233
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>CAA
T=>M
TERM=>Q
Cyrtomium falcatumChloroplast2
C-to-U: 1
U-to-C: 1
54597
55373
CDS
CDS
+U-to-C
C-to-U
UAA=>CAA
ACG=>AUG
TERM=>Q
T=>M
Cystopteris chinensisChloroplast2
C-to-U: 1
U-to-C: 1
54484
55261
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>UCA
T=>M
TERM=>S
Dendrobium officinaleChloroplast4
C-to-U: 4
57291
57660
58101
58347
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
CCU=>CUU
UCU=>UUU
UCA=>UUA
S=>F
P=>L
S=>F
S=>L
Deparia lanceaChloroplast2
C-to-U: 1
U-to-C: 1
54203
54980
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>UCA
T=>M
TERM=>S
Deparia pycnosoraChloroplast2
C-to-U: 1
U-to-C: 1
54530
55307
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>UCA
T=>M
TERM=>S
Deparia viridifronsChloroplast2
C-to-U: 1
U-to-C: 1
54497
55274
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>UCA
T=>M
TERM=>S
Diplaziopsis cavalerianaChloroplast2
C-to-U: 1
U-to-C: 1
54894
55670
CDS
CDS
+U-to-C
C-to-U
UAA=>CAA
ACG=>AUG
TERM=>Q
T=>M
Diplaziopsis javanicaChloroplast2
C-to-U: 1
U-to-C: 1
55109
55886
CDS
CDS
+U-to-C
C-to-U
UAA=>UCA
ACG=>AUG
TERM=>S
T=>M
Diplazium bellumChloroplast2
C-to-U: 1
U-to-C: 1
54403
55180
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>UCA
T=>M
TERM=>S
Diplazium dilatatumChloroplast2
C-to-U: 1
U-to-C: 1
54373
55149
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>CAA
T=>M
TERM=>Q
Diplazium dushanenseChloroplast2
C-to-U: 1
U-to-C: 1
54392
55169
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>UCA
T=>M
TERM=>S
Diplazium striatumChloroplast2
C-to-U: 1
U-to-C: 1
54017
54794
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>UCA
T=>M
TERM=>S
Diplazium unilobumChloroplast2
C-to-U: 1
U-to-C: 1
54331
55109
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>UAC
T=>M
TERM=>Y
Diplopterygium glaucumChloroplast1
NA: 1
70870-71802NA+NANA=>NANA=>NA
Dryopteris decipiensChloroplast1
C-to-U: 1
54527CDS+C-to-UACG=>AUGT=>M
Equisetum arvenseChloroplast1
NA: 1
24851-25798CDS-NANA=>NANA=>NA
Equisetum hyemaleChloroplast1
NA: 1
67593-68540CDS+NANA=>NANA=>NA
Eremospatha macrocarpaPlastid1
NA: 1
56886-58358CDS+NANA=>NANA=>NA
Erodium chrysanthumChloroplast1
NA: 1
29436-30890CDS-NANA=>NANA=>NA
Forsythia suspensaChloroplast2
C-to-U: 2
60846
61455
CDS
CDS
+C-to-U
C-to-U
UCG=>UUG
CCU=>CUU
S=>L
P=>L
Homalosorus pycnocarposChloroplast2
C-to-U: 1
U-to-C: 1
55124
55902
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>UAC
T=>M
TERM=>Y
Hymenasplenium unilateraleChloroplast2
C-to-U: 1
U-to-C: 1
55249
56027
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>UAC
T=>M
TERM=>Y
Hypodematium crenatumChloroplast2
C-to-U: 1
U-to-C: 1
54393
55171
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>UAC
T=>M
TERM=>Y
Lepisorus clathratusChloroplast1
C-to-U: 1
53566CDS+C-to-UACG=>AUGT=>M
Linum usitatissimumChloroplast2
C-to-U: 2
52808
53250
CDS
CDS
+C-to-U
C-to-U
CCU=>UCU
GCC=>GUC
P=>S
A=>V
Lygodium japonicumChloroplast1
NA: 1
56275-57216CDS+NANA=>NANA=>NA
Macrothelypteris torresianaChloroplast2
C-to-U: 1
U-to-C: 1
54413
55191
CDS
CDS
+U-to-C
C-to-U
UAA=>UAC
ACG=>AUG
TERM=>Y
T=>M
Mankyua chejuensisChloroplast1
C-to-U: 1
78332CDS+C-to-UACG=>AUGT=>M
Marsilea crenataChloroplast1
NA: 1
58756-59682CDS+NANA=>NANA=>NA
Matteuccia struthiopterisChloroplast2
C-to-U: 1
U-to-C: 1
53932
54709
CDS
CDS
+U-to-C
C-to-U
UAA=>UCA
ACG=>AUG
TERM=>S
T=>M
Millettia pinnataChloroplast2
C-to-U: 2
53533CDS
CDS
-C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
S=>L
S=>L
Myriopteris lindheimeriChloroplast2
C-to-U: 1
U-to-C: 1
54410
55180
CDS
CDS
+U-to-C
C-to-U
UAA=>CAA
ACG=>AUG
TERM=>Q
T=>M
Nothoceros aenigmaticusPlastid2
NA: 2
76955-77914NA
NA
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Onoclea sensibilisChloroplast2
C-to-U: 1
U-to-C: 1
53462
54239
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>UCA
T=>M
TERM=>S
Ophioglossum californicumChloroplast2
NA: 2
71777-72712CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Phalaenopsis equestrisChloroplast3
C-to-U: 3
59562
59790
59808
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
UCA=>UUA
CCU=>CUU
CCA=>CUA
S=>L
P=>L
S=>L
Pseudophegopteris auritaChloroplast2
C-to-U: 1
U-to-C: 1
54021
54798
CDS
CDS
+U-to-C
C-to-U
UAA=>UCA
ACG=>AUG
TERM=>S
T=>M
Pteridium aquilinum subsp. aquilinumChloroplast3
C-to-U: 2
U-to-C: 1
56207
56983
57136
CDS
CDS
CDS
+C-to-U
C-to-U
U-to-C
ACG=>AUG
CGA=>UGA
UAA=>CAA
T=>M
R=>TERM
TERM=>Q
Rhachidosorus consimilisChloroplast2
C-to-U: 1
U-to-C: 1
55210
55987
CDS
CDS
+U-to-C
C-to-U
UAA=>UCA
ACG=>AUG
TERM=>S
T=>M
Schizaea elegansChloroplast2
C-to-U: 1
U-to-C: 1
47303
47449
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UGA=>CGA
T=>M
TERM=>R
Schizaea pectinataChloroplast2
C-to-U: 1
U-to-C: 1
45188
45334
CDS
CDS
+U-to-C
C-to-U
UGA=>CGA
ACG=>AUG
TERM=>R
T=>M
Stegnogramma sagittifoliaChloroplast2
C-to-U: 1
U-to-C: 1
54212
54990
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>UAC
T=>M
TERM=>Y
Woodsia macrochlaenaChloroplast2
C-to-U: 1
U-to-C: 1
54319
55103
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>UAC
T=>M
TERM=>Y
Woodsia polystichoidesChloroplast2
C-to-U: 1
U-to-C: 1
54043
54826
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>UCA
T=>M
TERM=>S
Woodwardia unigemmataChloroplast2
C-to-U: 1
U-to-C: 1
54336
55112
CDS
CDS
+U-to-C
C-to-U
UAA=>CAA
ACG=>AUG
TERM=>Q
T=>M
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)