Cypripedium macranthos - Plant Editosome Database - BIG Data Center

Summary

Species: Cypripedium macranthos
NCBI Taxonomy: 53046
Organelle:Chloroplast (NC_024421.1)
Edited Genes:20
Editing Events:53
Gene Editing Events Genomic Position Region Strand RNA Type Codons Amino Acids
accD259427
59631
CDS
CDS
+
+
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
S=>L
S=>L
atpA110689CDS-mRNAC-to-UUCA=>UUAS=>L
atpF111999CDS-mRNAC-to-UCCA=>CUAP=>L
ccsA2116832
117003
CDS
CDS
+
+
mRNA
mRNA
C-to-U
C-to-U
ACU=>AUU
UCA=>UUA
T=>I
S=>L
clpP171251CDS-mRNAC-to-UCAU=>UAUH=>Y
matK22782
2317
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
CAU=>UAU
CAU=>UAU
H=>Y
H=>Y
ndhB14143885
143804
143794
143528
143522
143429
143396
143303
143278
143234
143159
142841
143947
144173
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
+
+
+
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
CGC=>UGC
UCA=>UUA
UCA=>UUA
CCA=>CUA
UCC=>UUC
UCA=>UUA
CAU=>UAU
ACG=>AUG
CCA=>CUA
UCA=>UUA
CAU=>UAU
CCA=>CUA
S=>L
S=>L
R=>C
S=>L
S=>L
P=>L
S=>F
S=>L
H=>Y
T=>M
P=>L
S=>L
H=>Y
P=>L
ndhD1117378-118733CDS-mRNANANA=>NANA=>NA
ndhJ149057-49533CDS-mRNANANA=>NANA=>NA
petB277585
77392
CDS
CDS
+
+
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
CGG=>UGG
P=>L
R=>W
psbF165478CDS-mRNAC-to-UUCU=>UUUS=>F
rpl21154760CDS+mRNAC-to-UACG=>AUGT=>M
rpl20169864CDS-mRNAC-to-UUCA=>UUAS=>L
rpoA179898CDS-mRNAC-to-UUCA=>UUAS=>L
rpoB626049
25914
25836
25821
25764
24387
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
UCG=>UUG
UCA=>UUA
UCG=>UUG
CCG=>CUG
UCU=>UUU
S=>F
S=>L
S=>L
S=>L
P=>L
S=>F
rpoC1322218
22320
22359
CDS
CDS
CDS
-
-
-
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
UCU=>UUU
ACC=>AUC
CCA=>CUA
S=>F
T=>I
P=>L
rpoC2519357
19088
18088
17885
17032
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
GCC=>GUC
CUC=>UUC
ACA=>AUA
CGG=>UGG
CCA=>CUA
A=>V
L=>F
T=>I
R=>W
P=>L
rps14237144
37075
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
CCA=>CUA
S=>L
P=>L
rps8281654
81574
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
CAU=>UAU
S=>L
H=>Y
ycf3442935
42794
42788
42572
CDS
CDS
CDS
CDS
-
-
-
-
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
ACG=>AUG
CCA=>CUA
UCC=>UUC
S=>F
T=>M
P=>L
S=>F

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)