Forsythia suspensa - Plant Editosome Database - BIG Data Center

Summary

Species: Forsythia suspensa
NCBI Taxonomy: 126418
Organelle:Chloroplast (NC_036367.1)
Edited Genes:21
Editing Events:52
Gene Editing Events Genomic Position Region Strand RNA Type Codons Amino Acids
accD260846
61455
CDS
CDS
+
+
mRNA
mRNA
C-to-U
C-to-U
UCG=>UUG
CCU=>CUU
S=>L
P=>L
atpA111809CDS-mRNAC-to-UUCA=>UUAS=>L
atpF113237CDS-mRNAC-to-UCCA=>CUAL=>P
atpI115873CDS-mRNAC-to-UUCA=>UUAS=>L
ccsA1116798CDS+mRNAC-to-UACU=>AUUT=>I
matK52413
2482
3016
3202
3391
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CAU=>UAU
CGG=>UGG
CAU=>UAU
CAC=>UAC
CCU=>UCU
H=>Y
R=>W
H=>Y
H=>Y
P=>S
ndhA2122777
122552
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
S=>L
S=>L
ndhB10144493
144304
143848
143842
143758
143749
143623
143598
143479
143161
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCA=>CUA
UCC=>UUC
UCA=>UUA
UCA=>UUA
UCU=>UUU
CCA=>CUA
UCA=>UUA
CAU=>UAU
CCA=>CUA
UCA=>UUA
P=>L
S=>F
S=>L
S=>L
S=>F
P=>L
S=>L
H=>Y
P=>L
S=>L
ndhD6118148
118160
118580
119145
119411
119456
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
UCA=>UUA
CGG=>UGG
UCU=>UUU
ACG=>AUG
S=>L
S=>L
S=>L
R=>W
S=>F
T=>M
ndhF2114778
114397
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
S=>L
S=>L
ndhG2120802
120731
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
ACA=>AUA
CCA=>UCA
T=>I
P=>S
petB279239
79432
CDS
CDS
+
+
mRNA
mRNA
C-to-U
C-to-U
CGG=>UGG
CCA=>CUA
R=>W
P=>L
petG169324CDS+mRNAC-to-UCUU=>UUUL=>F
psbE167576CDS-mRNAC-to-UCCU=>UCUP=>S
rpl21154630CDS+mRNAC-to-UGCG=>GUGA=>V
rpl20171789CDS-mRNAC-to-UUCA=>UUAS=>L
rpoA181225CDS-mRNAC-to-UUCA=>UUAS=>L
rpoB627689
27476
27461
26355
26027
25601
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
UCA=>UUA
UCG=>UUG
CCC=>UCC
UCU=>UUU
UCA=>UUA
S=>F
S=>L
S=>L
P=>S
S=>F
S=>L
rpoC2320041
19528
18087
CDS
CDS
CDS
-
-
-
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
CGU=>UGU
CGG=>UGG
UCA=>UUA
R=>C
R=>W
S=>L
rps14239390
39321
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
CCA=>CUA
S=>L
P=>L
rps2117189CDS-mRNAC-to-UUCA=>UUAS=>L

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)