atpI - Plant Editosome Database - CNCB-NGDC

Summary

Gene: atpI
Function: ATP synthase
Species: 56
Editing Types:
C-to-U (63)
U-to-C (46)
Editing Sites: 160 (C-to-U: 63   NA: 51   U-to-C: 46)
External Link: NCBI Gene
Species Organelle Editing Sites Editing Types Genomic Position Region Strand Type Codons Amino Acid
Adiantum capillus-venerisChloroplast1
NA: 1
14002-14748CDS-NANA=>NANA=>NA
Alsophila spinulosaChloroplast1
NA: 1
14235-14981CDS-NANA=>NANA=>NA
Ampelopteris proliferaChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14358-15104
15035
15103
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Anthoceros angustusChloroplast19
C-to-U: 12
U-to-C: 7
15176
15212
15218
15225
15236
15264
15270
15281
15362
15419
15420
15423
15450
15528
15542
15657
15765
15788
15801
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
U-to-C
U-to-C
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
U-to-C
C-to-U
UAA=>CAA
UAU=>CAU
UAG=>CAG
CCU=>CUU
CGG=>UGG
UCA=>UUA
ACU=>AUU
UAG=>CAG
UAA=>CAA
CCC=>UCC
CCC=>CUC
ACU=>AUU
CCC=>CUC
UCA=>UUA
CCA=>UCA
CUU=>CCU
UCA=>UUA
UAA=>CAA
UCU=>UUU
TERM=>Q
Y=>H
TERM=>Q
P=>L
R=>W
S=>L
T=>I
TERM=>Q
TERM=>Q
P=>S
P=>L
T=>I
P=>L
S=>L
P=>S
L=>P
S=>L
TERM=>Q
S=>F
Apopellia endiviifoliaChloroplast4
C-to-U: 4
17821
17960
18161
18233
CDS
CDS
CDS
CDS
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
CUU=>UUU
CCU=>CUU
CCA=>CUA
CCA=>CUA
L=>F
P=>L
P=>L
P=>L
Asplenium pekinenseChloroplast2
NA: 1
U-to-C: 1
14237-14983
14914
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Asplenium prolongatumChloroplast2
NA: 1
U-to-C: 1
13991-14737
14668
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium anisopterumChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14289-15035
14966
15034
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium opacumChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14335-15081
15012
15080
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sheareriChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14301-15047
14978
15046
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sinenseChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14312-15058
14989
15057
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Austroblechnum melanocaulonChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14329-15075
15006
15074
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Christella appendiculataChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14304-15050
14981
15049
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cocos nuciferaChloroplast2
C-to-U: 2
15123
15324
CDS
CDS
-
-
C-to-U
C-to-U
UCA=>UUA
CCC=>CUC
S=>L
P=>L
Cyrtomium devexiscapulaeChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14403-15149
15080
15148
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cyrtomium falcatumChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14542-15288
15219
15287
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cystopteris chinensisChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14372-15118
15049
15117
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Dendrobium officinaleChloroplast2
C-to-U: 2
14898
15099
CDS
CDS
-
-
C-to-U
C-to-U
UCA=>UUA
CCU=>CUU
S=>L
P=>L
Deparia lanceaChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14003-14749
14680
14748
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia pycnosoraChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14280-15026
14957
15025
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia viridifronsChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14335-15081
15012
15080
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplaziopsis cavalerianaChloroplast3
NA: 1
U-to-C: 2
14452-15198
15129
15197
CDS
NA
NA
-
+
+
NA
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplaziopsis javanicaChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14502-15248
15179
15247
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium bellumChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14273-15019
14950
15018
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dilatatumChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14233-14979
14910
14978
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dushanenseChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14282-15028
14959
15027
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium striatumChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14261-15007
14938
15006
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium unilobumChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14291-15037
14968
15036
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplopterygium glaucumChloroplast1
NA: 1
29162-29908NA-NANA=>NANA=>NA
Dryopteris decipiensChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14200-14946
14877
14945
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Forsythia suspensaChloroplast1
C-to-U: 1
15873CDS-C-to-UUCA=>UUAS=>L
Hevea brasiliensisChloroplast1
C-to-U: 1
27388CDS+C-to-UUCA=>UUAS=>L
Homalosorus pycnocarposChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14489-15235
15166
15234
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Huperzia lucidulaChloroplast1
NA: 1
83248-83991CDS-NANA=>NANA=>NA
Hymenasplenium unilateraleChloroplast2
NA: 1
U-to-C: 1
14299-15045
14976
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hypodematium crenatumChloroplast2
NA: 1
U-to-C: 1
14213-14959
14890
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hypseocharis bilobataChloroplast1
C-to-U: 1
71214CDS-C-to-UCCA=>CUAP=>L
Isoetes flaccidaChloroplast1
NA: 1
73593-74345CDS-NANA=>NANA=>NA
Lepisorus clathratusChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
13071-13817
13748
13816
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Lygodium japonicumChloroplast1
NA: 1
14846-15592CDS-NANA=>NANA=>NA
Macrothelypteris torresianaChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14396-15142
15073
15141
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Marsilea crenataChloroplast1
NA: 1
17124-17870CDS-NANA=>NANA=>NA
Matteuccia struthiopterisChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14402-15148
15079
15147
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Myriopteris lindheimeriChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14614-15360
15291
15359
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Nothoceros aenigmaticusPlastid1
NA: 1
19876-20622NA+NANA=>NANA=>NA
Onoclea sensibilisChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14328-15074
15005
15073
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Phalaenopsis equestrisChloroplast2
C-to-U: 2
15272
15473
CDS
CDS
-
-
C-to-U
C-to-U
UCA=>UUA
CCU=>CUU
S=>L
P=>L
Pseudophegopteris auritaChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14095-14841
14772
14840
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Pteridium aquilinum subsp. aquilinumChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14418-15164
15095
15163
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhachidosorus consimilisChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14406-15152
15083
15151
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Schizaea elegansChloroplast1
NA: 1
7938-8684CDS-NANA=>NANA=>NA
Schizaea pectinataChloroplast2
C-to-U: 1
NA: 1
7180-7926
7925
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Stegnogramma sagittifoliaChloroplast2
NA: 1
U-to-C: 1
14313-15059
14990
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodsia macrochlaenaChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14244-14990
14921
14989
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodsia polystichoidesChloroplast2
NA: 1
U-to-C: 1
14270-15016
14947
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodwardia unigemmataChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
14316-15062
14993
15061
CDS
NA
NA
-
+
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Species Organelle Editing Sites Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Sep 2026 (version 2.0)