Arabidopsis lyrata subsp. lyrata MN47 - Plant Editosome Database - BIG Data Center

Summary

Species: Arabidopsis lyrata subsp. lyrata MN47
NCBI Taxonomy: 81972
Organelle:Chloroplast (NC_034379.1)
Edited Genes:19
Editing Events:37
Gene Editing Events Genomic Position Region Strand RNA Type Codons Amino Acids
accD158069CDS+mRNAC-to-UUCG=>UUGS=>L
atpF112563NA+mRNAC-to-UNA=>NANA=>NA
clpP170238NA+mRNAC-to-UNA=>NANA=>NA
matK12901NA+mRNAC-to-UNA=>NANA=>NA
ndhB895928
95503
95922
95886
95277
96697
96976
96857
NA
NA
NA
NA
NA
NA
NA
NA
+
+
+
+
+
+
+
+
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
ndhD6116341
116978
116774
116765
117269
117650
NA
NA
NA
NA
NA
NA
+
+
+
+
+
+
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
ndhF1112648NA+mRNAC-to-UNA=>NANA=>NA
ndhG1119330NA+mRNAC-to-UNA=>NANA=>NA
Novel46247
58842
69855
75370
NA
NA
NA
NA
+
+
+
+
Unanotated Transcript
Unanotated Transcript
Unanotated Transcript
Unanotated Transcript
C-to-U
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
petL165995CDS+mRNAC-to-UCCU=>CUUP=>L
psbE164391NA+mRNAC-to-UNA=>NANA=>NA
psbF164267NA+mRNAC-to-UNA=>NANA=>NA
psbJ163884NA+mRNAC-to-UNA=>NANA=>NA
psbZ135772CDS+mRNAC-to-UUCA=>UUAS=>L
rpoA178983NA+mRNAC-to-UNA=>NANA=>NA
rpoB323796
25677
25890
NA
NA
NA
+
+
+
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rpoC1121690NA+mRNAC-to-UNA=>NANA=>NA
rps14237079
37010
NA
NA
+
+
mRNA
mRNA
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rps1615032NA+mRNAC-to-UNA=>NANA=>NA

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)