ORRM1 - Plant Editosome Database

Editing Details

Species

Gene ID

Organelle

Edited Gene

Position

Region

Editing Type

Codon

Amino Acid

Molecular Effect

Experiment Details

Arabidopsis thaliana

At3g20930

Plastid

accD

1568

CDS

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	0.00%	Unedited	Absent	32259001

Arabidopsis thaliana

At3g20930

Plastid

accD

794

CDS

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	100.00%	Complete	Similar	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast

accD

3'UTR

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	81.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	67.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	1.00%	Poor	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	4.00%	Poor	Decreased	23487777

Arabidopsis thaliana

At3g20930

Plastid

atpF

CDS

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	100.00%	Complete	Similar	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

clpP

559

CDS

C-to-U

CAU=>UAU
NA=>NA

H=>Y
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	90.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	85.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	24.00%	Low	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	40.00%	Medium	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	33.33%	Low	Decreased	32259001

Arabidopsis thaliana

At3g20930

Plastid

matK

640

CDS

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	0.00%	Unedited	Absent	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast

matK

706

CDS

C-to-U

CAU=>UAU

H=>Y

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	89.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	85.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	7.00%	Poor	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	1.00%	Poor	Decreased	23487777

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

ndhB

1255

CDS

C-to-U

CAU=>UAU
NA=>NA

H=>Y
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	100.00%	Complete	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	95.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	40.00%	Medium	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	42.00%	Medium	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	36.84%	Low	Decreased	32259001

Arabidopsis thaliana

At3g20930

Plastid

ndhB

1481

CDS

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	100.00%	Complete	Similar	32259001

Arabidopsis thaliana

At3g20930

Plastid

ndhB

149

CDS

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	100.00%	Complete	Similar	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

ndhB

467

CDS

C-to-U

CCA=>CUA
NA=>NA

P=>L
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	98.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	91.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	5.00%	Poor	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	4.00%	Poor	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	0.00%	Unedited	Absent	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

ndhB

586

CDS

C-to-U

CAU=>UAU
NA=>NA

H=>Y
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	98.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	92.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	5.00%	Poor	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	6.00%	Poor	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	0.00%	Unedited	Absent	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

ndhB

746

CDS

C-to-U

UCU=>UUU
NA=>NA

S=>F
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	98.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	94.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	46.00%	Medium	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	49.00%	Medium	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	50.00%	Medium	Decreased	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

ndhB

830

CDS

C-to-U

UCA=>UUA
NA=>NA

S=>L
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	94.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	84.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	28.00%	Low	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	22.00%	Low	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	18.75%	Poor	Decreased	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

ndhB

836

CDS

C-to-U

UCA=>UUA
NA=>NA

S=>L
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	88.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	73.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	4.00%	Poor	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	8.00%	Poor	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	0.00%	Unedited	Absent	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

ndhB

872

CDS

C-to-U

UCA=>UUA
NA=>NA

S=>L
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	95.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	85.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	1.00%	Poor	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	1.00%	Poor	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	0.00%	Unedited	Absent	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

ndhD

CDS

C-to-U

ACG=>AUG
NA=>NA

T=>M
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	46.00%	Medium	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	54.00%	Medium	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	21.00%	Low	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	31.00%	Low	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	0.00%	Unedited	Absent	32259001

Arabidopsis thaliana

At3g20930

Plastid

ndhD

383

CDS

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	100.00%	Complete	Similar	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

ndhD

674

CDS

C-to-U

UCA=>UUA
NA=>NA

S=>L
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	96.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	88.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	2.00%	Poor	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	2.00%	Poor	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	0.00%	Unedited	Absent	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

ndhD

878

CDS

C-to-U

UCA=>UUA
NA=>NA

S=>L
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	87.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	86.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	2.00%	Poor	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	3.00%	Poor	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	0.00%	Unedited	Absent	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

ndhD

887

CDS

C-to-U

CCC=>CUC
NA=>NA

P=>L
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	88.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	85.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	3.00%	Poor	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	3.00%	Poor	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	0.00%	Unedited	Absent	32259001

Arabidopsis thaliana

At3g20930

Plastid

ndhF

290

CDS

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	100.00%	Complete	Similar	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

ndhG

CDS

C-to-U

UCC=>UUC
NA=>NA

S=>F
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	80.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	77.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	5.00%	Poor	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	7.00%	Poor	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	0.00%	Unedited	Absent	32259001

Arabidopsis thaliana

At3g20930

Plastid

petL

CDS

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	77.78%	High	Similar	32259001

Arabidopsis thaliana

At3g20930

Plastid

psbE

214

CDS

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	100.00%	Complete	Similar	32259001

Arabidopsis thaliana

At3g20930

Plastid

psbF

CDS

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	100.00%	Complete	Similar	32259001

Arabidopsis thaliana

At3g20930

Plastid

psbZ

CDS

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	94.44%	High	Similar	32259001

Arabidopsis thaliana

At3g20930

Plastid

rpl23

CDS

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	14.29%	Poor	Similar	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

rpoA

200

CDS

C-to-U

UCU=>UUU
NA=>NA

S=>F
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	81.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	40.00%	Medium	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	22.00%	Low	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	22.00%	Low	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	44.44%	Medium	Decreased	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

rpoB

2432

CDS

C-to-U

UCA=>UUA
NA=>NA

S=>L
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	96.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	81.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	8.00%	Poor	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	20.00%	Low	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	0.00%	Unedited	Absent	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

rpoB

338

CDS

C-to-U

UCU=>UUU
NA=>NA

S=>F
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	93.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	83.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	80.00%	High	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	77.00%	High	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	81.25%	High	Decreased	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

rpoB

551

CDS

C-to-U

UCA=>UUA
NA=>NA

S=>L
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	96.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	83.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	25.00%	Low	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	22.00%	Low	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	33.33%	Low	Decreased	32259001

Arabidopsis thaliana

At3g20930

Plastid

rpoC1

488

CDS

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	30.43%	Low	Similar	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

rps12

Intron

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	40.00%	Medium	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	33.00%	Low	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	0.00%	Unedited	Absent	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	0.00%	Unedited	Absent	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	0.00%	Unedited	Absent	32259001

Arabidopsis thaliana

AT3G20930

Chloroplast
Plastid

rps14

149

CDS

C-to-U

CCA=>CUA
NA=>NA

P=>L
NA=>NA

Recoding
NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Gene specific RNA-seq	92.00%	High	None	23487777
Col-0	WT	Control	Control	Control	Normal	Leaf	NA	Total plastid RNA-seq	90.00%	High	None	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Gene specific RNA-seq	60.00%	High	Decreased	23487777
SALK_072648	orrm1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous; Knockout	The homozygous mutant plant does not show any phenotypic defect compared with a Columbia wild-type plant when grown under growth-room conditions.	Leaf	NA	Total plastid RNA-seq	75.00%	High	Decreased	23487777
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	50.00%	Medium	Absent	32259001

Arabidopsis thaliana

At3g20930

Plastid

rps14

CDS

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Columbia	orrm1-1	T-DNA insertion lines orrm1-1 (SALK_072648)	NA	Homozygous	The orrm1-1 mutant was actually slightly bigger than the Columbia wild type.	Leaf	4-week	RT-PCR and Sanger sequencing	90.91%	High	Similar	32259001

Zea mays

GRMZM5G899787

Chloroplast

atpA

1148

CDS

C-to-U

UCA=>UUA

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	10.00%	Poor	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	100.00%	Complete	None	23487777
NA	WT	Control	Control	Control	Normal	Leaf	14-21 days	Direct Sequencing of PCR Products	NA	Low	None	31077462

Zea mays

GRMZM5G899787

Chloroplast

matK

1258

CDS

C-to-U

CAU=>UAU

H=>Y

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	10.00%	Poor	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	90.00%	High	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

ndhA

1070

CDS

C-to-U

UCC=>UUC

S=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	90.00%	High	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	100.00%	Complete	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

ndhA

473

CDS

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	WT	Control	Control	Control	Normal	Leaf	14-21 days	Direct Sequencing of PCR Products	NA	Low	None	31077462

Zea mays

GRMZM5G899787

Chloroplast

ndhA

CDS

C-to-U

UCG=>UUG

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	10.00%	Poor	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	100.00%	Complete	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

ndhB

467

CDS

C-to-U

CCA=>CUA

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	10.00%	Poor	Decreased	23487777
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Poisoned Primer Extension (PPE) Assay	31.00%	Low	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	100.00%	Complete	None	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Poisoned Primer Extension (PPE) Assay	97.00%	High	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

ndhB

586

CDS

C-to-U

CAU=>UAU

H=>Y

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	0.00%	Unedited	Absent	23487777
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Poisoned Primer Extension (PPE) Assay	7.00%	Poor	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	100.00%	Complete	None	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Poisoned Primer Extension (PPE) Assay	98.00%	High	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

ndhB

737

CDS

C-to-U

CCA=>CUA

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	10.00%	Poor	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	100.00%	Complete	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

ndhB

830

CDS

C-to-U

UCA=>UUA

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	60.00%	High	Decreased	23487777
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Poisoned Primer Extension (PPE) Assay	65.00%	High	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	100.00%	Complete	None	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Poisoned Primer Extension (PPE) Assay	99.00%	High	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

ndhD

878

CDS

C-to-U

UCA=>UUA

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	20.00%	Low	Decreased	23487777
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Poisoned Primer Extension (PPE) Assay	29.00%	Low	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	100.00%	Complete	None	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Poisoned Primer Extension (PPE) Assay	96.00%	High	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

ndhG

347

CDS

C-to-U

CCA=>CUA

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	90.00%	High	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	100.00%	Complete	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

petB

668

CDS

C-to-U

CCA=>CUA

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	0.00%	Unedited	Absent	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	100.00%	Complete	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

rpl2

CDS

C-to-U

ACG=>AUG

T=>M

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	70.00%	High	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	90.00%	High	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

rpl20

308

CDS

C-to-U

UCA=>UUA

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	20.00%	Low	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	90.00%	High	None	23487777
NA	WT	Control	Control	Control	Normal	Leaf	14-21 days	Direct Sequencing of PCR Products	NA	Low	None	31077462

Zea mays

GRMZM5G899787

Chloroplast

rpoB

467

CDS

C-to-U

UCG=>UUG

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	60.00%	High	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	90.00%	High	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

rpoB

545

CDS

C-to-U

UCA=>UUA

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	0.00%	Unedited	Absent	23487777
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Poisoned Primer Extension (PPE) Assay	14.00%	Poor	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	90.00%	High	None	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Poisoned Primer Extension (PPE) Assay	89.00%	High	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

rpoB

560

CDS

C-to-U

UCG=>UUG

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	60.00%	High	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	90.00%	High	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

rpoB

617

CDS

C-to-U

CCG=>CUG

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	40.00%	Medium	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	80.00%	High	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

rpoC2

2774

CDS

C-to-U

UCG=>UUG

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	90.00%	High	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	100.00%	Complete	None	23487777
NA	WT	Control	Control	Control	Normal	Leaf	14-21 days	Direct Sequencing of PCR Products	NA	High	None	31077462

Zea mays

GRMZM5G899787

Chloroplast

rps14

CDS

C-to-U

UCA=>UUA

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	90.00%	High	Decreased	23487777
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Poisoned Primer Extension (PPE) Assay	90.00%	High	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	100.00%	Complete	None	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Poisoned Primer Extension (PPE) Assay	97.00%	High	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

rps8

182

CDS

C-to-U

UCA=>UUA

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	30.00%	Low	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	100.00%	Complete	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

ycf3

185

CDS

C-to-U

ACG=>AUG

T=>M

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	0.00%	Unedited	Absent	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	100.00%	Complete	None	23487777

Zea mays

GRMZM5G899787

Chloroplast

ycf3

CDS

C-to-U

UCC=>UUC

S=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	Zm-orrm1	Mu Insertion	Complementation crosses between plants heterozygous for the two alleles (Zm-orrm1-1 and Zm-orrm1-2) yielded heteroallelic mutant progeny (Zm-orrm1-1/Zm-orrm1-2).	Heterozygous	Pale green phenotype	Leaf	NA	Bulk sequencing of RT-PCR products	20.00%	Low	Decreased	23487777
NA	WT	Control	Control	Control	Normal	Leaf	NA	Bulk sequencing of RT-PCR products	100.00%	Complete	None	23487777

Editing Factor:	ORRM1
Synonym:	ORGANELLE RRM PROTEIN 1
Description:	Encoding a unique protein that is both a member of the RIP (RNA-editing interacting protein) family and the RNA recognition motif (RRM)-containing family
Protein Family:	ORRM
Subclass:	NA
Construct Structure:	NA, PTP-RIP-ORRM
Gene ID & Species:	AT3G20930 (Arabidopsis thaliana) GRMZM5G899787 (Zea mays)
Edited Gene(s):	accD clpP matK ndhB ndhD ndhG rpoA rpoB rps12 rps14 atpA ndhA petB rpl2 rpl20 rpoC2 rps8 ycf3 atpF ndhF petL psbE psbF psbZ rpl23 rpoC1
Editing Type(s):	C-to-U (178)
Publication(s):	[1] Two organelle RNA recognition motif proteins affect distinct sets of RNA editing sites in the plastid., Plant direct, 2020. [PMID=32259001] [2] Stable native RIP9 complexes associate with C-to-U RNA editing activity, PPRs, RIPs, OZ1, ORRM1 and ISE2., The Plant journal : for cell and molecular biology, 2019. [PMID=31077462] [3] An RNA recognition motif-containing protein is required for plastid RNA editing in Arabidopsis and maize., Proceedings of the National Academy of Sciences of the United States of America, 2013. [PMID=23487777]

Plant Editosome Database
a curated database of RNA editosome in plants

Summary

Editing Details