Schizaea elegans - Plant Editosome Database - BIG Data Center

Summary

Gene Editing Events Genomic Position Region Strand RNA Type Codons Amino Acids
accD247303
47449
CDS
CDS
+
+
mRNA
mRNA
C-to-U
U-to-C
ACG=>AUG
UGA=>CGA
T=>M
TERM=>R
atpA25402
3981-5504
NA
CDS
+
-
Unanotated Transcript
mRNA
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
atpB244383
42912-44384
NA
CDS
+
-
Unanotated Transcript
mRNA
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
atpH27001-7246
7245
CDS
NA
-
+
mRNA
Unanotated Transcript
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
atpI17938-8684CDS-mRNANANA=>NANA=>NA
ccsA2103189
128889
CDS
NA
+
+
mRNA
Unanotated Transcript
U-to-C
U-to-C
UAA=>CAA
NA=>NA
TERM=>Q
NA=>NA
chlB1155486-157027CDS-mRNANANA=>NANA=>NA
chlL2115774-116658
116657
CDS
NA
-
+
mRNA
Unanotated Transcript
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
infA268496
68371-68616
NA
CDS
+
-
Unanotated Transcript
mRNA
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Novel3423
175
43
NA
NA
NA
+
+
+
Unanotated Transcript
Unanotated Transcript
Unanotated Transcript
C-to-U
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
petA251955
51946
CDS
CDS
+
+
mRNA
mRNA
U-to-C
U-to-C
UAA=>CAA
UAG=>CAG
TERM=>Q
TERM=>Q
petD165165CDS+mRNAC-to-UACG=>AUGT=>M
petN122221CDS+mRNAC-to-UACG=>AUGT=>M
psaA233319-35571
35570
CDS
NA
-
+
mRNA
Unanotated Transcript
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
psaB232932
31091-33295
NA
CDS
+
-
Unanotated Transcript
mRNA
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
psaC2105949
126129
NA
CDS
+
+
Unanotated Transcript
mRNA
C-to-U
C-to-U
NA=>NA
ACG=>AUG
NA=>NA
T=>M
psbB260907
62370
CDS
CDS
+
+
mRNA
mRNA
C-to-U
U-to-C
ACG=>AUG
UAA=>CAA
T=>M
TERM=>Q
psbE254064
53864-54115
NA
CDS
+
-
Unanotated Transcript
mRNA
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
psbL253598
53596-53712
NA
CDS
+
-
Unanotated Transcript
mRNA
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rpl14269600
69598-69966
NA
CDS
+
-
Unanotated Transcript
mRNA
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rpl16370496-70900
71783-71791
71790
CDS
CDS
NA
-
-
+
mRNA
mRNA
Unanotated Transcript
NA
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rpl2474635-75031
73458-73894
73460
75022
CDS
CDS
NA
NA
-
-
+
+
mRNA
mRNA
Unanotated Transcript
Unanotated Transcript
NA
NA
C-to-U
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rpl322101287
130791
CDS
NA
+
+
mRNA
Unanotated Transcript
C-to-U
C-to-U
ACG=>AUG
NA=>NA
T=>M
NA=>NA
rpoA367271
66570-67580
67340
NA
CDS
NA
+
-
+
Unanotated Transcript
mRNA
Unanotated Transcript
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rpoB817218
17179
19921
16916-20110
19963
18379
19393
19882
NA
NA
NA
CDS
NA
NA
NA
NA
+
+
+
-
+
+
+
+
Unanotated Transcript
Unanotated Transcript
Unanotated Transcript
mRNA
Unanotated Transcript
Unanotated Transcript
Unanotated Transcript
Unanotated Transcript
U-to-C
U-to-C
U-to-C
NA
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rpoC1416453-16884
14028-15614
16883
16770
CDS
CDS
NA
NA
-
-
+
+
mRNA
mRNA
Unanotated Transcript
Unanotated Transcript
NA
NA
C-to-U
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rpoC2613911
12109
13198
13186
12640
9734-13912
NA
NA
NA
NA
NA
CDS
+
+
+
+
+
-
Unanotated Transcript
Unanotated Transcript
Unanotated Transcript
Unanotated Transcript
Unanotated Transcript
mRNA
C-to-U
U-to-C
U-to-C
U-to-C
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rps11267889
67617-68012
NA
CDS
+
-
Unanotated Transcript
mRNA
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rps152123705
108373
CDS
NA
+
+
mRNA
Unanotated Transcript
C-to-U
C-to-U
ACG=>AUG
NA=>NA
T=>M
NA=>NA
rps228866-9576
9575
CDS
NA
-
+
mRNA
Unanotated Transcript
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rps3372635
72606
71980-72636
NA
NA
CDS
+
+
-
Unanotated Transcript
Unanotated Transcript
mRNA
C-to-U
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rps4239137
38518-39138
NA
CDS
+
-
Unanotated Transcript
mRNA
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
ycf14119359
121690
110388
112719
CDS
CDS
NA
NA
+
+
+
+
mRNA
mRNA
Unanotated Transcript
Unanotated Transcript
U-to-C
U-to-C
U-to-C
U-to-C
UAG=>CAG
UAA=>CAA
NA=>NA
NA=>NA
TERM=>Q
TERM=>Q
NA=>NA
NA=>NA
ycf2694397
136214
94203
137875
95864
137681
CDS
NA
CDS
NA
CDS
NA
+
+
+
+
+
+
mRNA
Unanotated Transcript
mRNA
Unanotated Transcript
mRNA
Unanotated Transcript
U-to-C
U-to-C
C-to-U
C-to-U
U-to-C
U-to-C
UGA=>CGA
NA=>NA
ACG=>AUG
NA=>NA
UAA=>CAA
NA=>NA
TERM=>R
NA=>NA
T=>M
NA=>NA
TERM=>Q
NA=>NA
ycf4149296CDS+mRNAC-to-UACG=>AUGT=>M

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)