Gene: | chlB |
Function: | Protochlorophyllide reductase |
Species: | 47 |
Editing Types: |
|
Editing Events: | 134 (U-to-C: 72 NA: 48 C-to-U: 14) |
External Link: | NCBI Gene |
Species | Organelle | Editing Events | Editing Types | Genomic Position | Region | Strand | Type | Codons | Amino Acid |
---|---|---|---|---|---|---|---|---|---|
Adiantum capillus-veneris | Chloroplast | 1 | NA: 1 | 4441-6070 | CDS | - | NA | NA=>NA | NA=>NA |
Alsophila spinulosa | Chloroplast | 1 | NA: 1 | 5141-6682 | CDS | - | NA | NA=>NA | NA=>NA |
Ampelopteris prolifera | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4863-6407 6158 | NA CDS | + - | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
Anthoceros angustus | Chloroplast | 26 | C-to-U: 11 U-to-C: 15 | 24929 24935 24936 24998 25110 25116 25137 25149 25200 25217 25220 25235 25247 25259 25353 25400 25494 25575 25607 25685 25688 25710 25971 26040 26057 26253 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + | U-to-C U-to-C C-to-U C-to-U U-to-C C-to-U U-to-C C-to-U U-to-C C-to-U U-to-C U-to-C C-to-U U-to-C C-to-U U-to-C C-to-U U-to-C C-to-U C-to-U U-to-C U-to-C U-to-C U-to-C U-to-C C-to-U | CUC=>CCC UAU=>CAU CUU=>UUU CAU=>UAU UGA=>CGA UCA=>UUA UUU=>CUU UCG=>UUG UGA=>CGA ACU=>AUU UCU=>CCU UUU=>UCU CUA=>UUA CUU=>CCU UCA=>UUA CUA=>CCA UCA=>UUA UGA=>CGA UCA=>UUA UCC=>UUC UAA=>CAA UAA=>CAA UAA=>CAA GUU=>GCU UAG=>CAG UCA=>UUA | L=>P Y=>H L=>F H=>Y TERM=>R S=>L F=>L S=>L TERM=>R T=>I S=>P F=>S L=>L L=>P S=>L L=>P S=>L TERM=>R S=>L S=>F TERM=>Q TERM=>Q TERM=>Q V=>A TERM=>Q S=>L |
Asplenium pekinense | Chloroplast | 3 | NA: 1 U-to-C: 2 | 4772-6316 5935 6067 | NA CDS NA | + - | U-to-C NA U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
Asplenium prolongatum | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4781-6325 6076 | CDS NA | - + | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
Athyrium anisopterum | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4801-6345 6096 | NA CDS | + - | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
Athyrium opacum | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4816-6360 6111 | CDS NA | - + | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
Athyrium sheareri | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4815-6359 6110 | NA CDS | + - | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
Athyrium sinense | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4827-6371 6122 | NA CDS | + - | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
Austroblechnum melanocaulon | Chloroplast | 3 | NA: 1 U-to-C: 2 | 4786-6330 5949 6081 | NA CDS NA | + - | U-to-C NA U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
Christella appendiculata | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4862-6406 6157 | NA CDS | + - | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
Cyrtomium devexiscapulae | Chloroplast | 3 | NA: 1 U-to-C: 2 | 4910-6454 6073 6205 | CDS NA NA | - + | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
Cyrtomium falcatum | Chloroplast | 3 | NA: 1 U-to-C: 2 | 5057-6601 6220 6352 | CDS NA NA | - + | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
Cystopteris chinensis | Chloroplast | 3 | NA: 1 U-to-C: 2 | 4822-6366 5985 6117 | CDS NA NA | - + | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
Deparia lancea | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4816-6360 6111 | NA CDS | + - | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
Deparia pycnosora | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4811-6355 6106 | NA CDS | + - | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
Deparia viridifrons | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4810-6354 6105 | NA CDS | + - | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
Diplaziopsis cavaleriana | Chloroplast | 3 | NA: 1 U-to-C: 2 | 4887-6431 6050 6182 | NA CDS NA | + - | U-to-C NA U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
Diplaziopsis javanica | Chloroplast | 3 | NA: 1 U-to-C: 2 | 4899-6443 6062 6194 | NA CDS NA | + - | U-to-C NA U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
Diplazium bellum | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4781-6325 6076 | NA CDS | + - | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
Diplazium dilatatum | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4755-6299 6050 | CDS NA | - + | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
Diplazium dushanense | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4769-6313 6064 | CDS NA | - + | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
Diplazium striatum | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4773-6317 6068 | NA CDS | + - | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
Diplazium unilobum | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4790-6334 6085 | NA CDS | + - | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
Diplopterygium glaucum | Chloroplast | 1 | NA: 1 | 19471-21012 | NA | - | NA | NA=>NA | NA=>NA |
Dryopteris decipiens | Chloroplast | 3 | NA: 1 U-to-C: 2 | 4890-6434 6053 6185 | CDS NA NA | - + | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
Homalosorus pycnocarpos | Chloroplast | 3 | NA: 1 U-to-C: 2 | 4917-6461 6080 6212 | NA CDS NA | + - | U-to-C NA U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
Hymenasplenium unilaterale | Chloroplast | 3 | NA: 1 U-to-C: 2 | 4675-6219 5838 5970 | NA CDS NA | + - | U-to-C NA U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
Hypodematium crenatum | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4850-6394 6145 | CDS NA | - + | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
Lepisorus clathratus | Chloroplast | 3 | NA: 1 U-to-C: 2 | 3631-5175 4794 4926 | NA NA CDS | + - | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
Lygodium japonicum | Chloroplast | 1 | NA: 1 | 5573-7114 | CDS | - | NA | NA=>NA | NA=>NA |
Macrothelypteris torresiana | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4865-6409 6160 | NA CDS | + - | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
Marsilea crenata | Chloroplast | 1 | NA: 1 | 7549-9090 | CDS | - | NA | NA=>NA | NA=>NA |
Matteuccia struthiopteris | Chloroplast | 3 | NA: 1 U-to-C: 2 | 4835-6379 5998 6130 | CDS NA NA | - + | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
Myriopteris lindheimeri | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4874-6418 6169 | NA CDS | + - | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
Nothoceros aenigmaticus | Plastid | 2 | NA: 2 | 29664-31205 | NA NA | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
Onoclea sensibilis | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4768-6312 6063 | NA CDS | + - | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
Pseudophegopteris aurita | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4857-6407 6158 | CDS NA | - + | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
Pteridium aquilinum subsp. aquilinum | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 4859-6403 6022 6154 | NA NA CDS | + - | C-to-U U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
Rhachidosorus consimilis | Chloroplast | 3 | NA: 1 U-to-C: 2 | 4833-6377 5996 6128 | NA CDS NA | + - | U-to-C NA U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
Schizaea elegans | Chloroplast | 1 | NA: 1 | 155486-157027 | CDS | - | NA | NA=>NA | NA=>NA |
Schizaea pectinata | Chloroplast | 6 | C-to-U: 2 U-to-C: 4 | 155928 156060 156308 73304 73552 73684 | NA CDS NA CDS NA CDS | + | U-to-C U-to-C C-to-U C-to-U U-to-C U-to-C | NA=>NA UAA=>CAA NA=>NA ACG=>AUG NA=>NA UGA=>CGA | NA=>NA TERM=>Q NA=>NA T=>M NA=>NA TERM=>R |
Stegnogramma sagittifolia | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4859-6403 6154 | NA CDS | + - | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
Woodsia macrochlaena | Chloroplast | 3 | NA: 1 U-to-C: 2 | 4816-6360 5979 6111 | NA CDS NA | + - | U-to-C NA U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
Woodsia polystichoides | Chloroplast | 3 | NA: 1 U-to-C: 2 | 4839-6383 6002 6134 | NA CDS NA | + - | U-to-C NA U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
Woodwardia unigemmata | Chloroplast | 2 | NA: 1 U-to-C: 1 | 4812-6356 6107 | NA CDS | + - | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
Species | Organelle | Editing Events | Editing Types | Genomic Position | Region | Strand | Type | Codons | Amino Acid |
( NA = Data Not Available )