petN - Plant Editosome Database - BIG Data Center

Summary

Gene: petN
Function: Cytochrome b6/f complex
Species: 56
Editing Types:
C-to-U (43)
Editing Events: 99 (NA: 56   C-to-U: 43)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Adiantum capillus-venerisChloroplast1
NA: 1
29157-29249CDS-NANA=>NANA=>NA
Alsophila spinulosaChloroplast1
NA: 1
29896-29985CDS-NANA=>NANA=>NA
Ampelopteris proliferaChloroplast2
C-to-U: 1
NA: 1
29330-29419
29418
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Apopellia endiviifoliaChloroplast1
C-to-U: 1
5695CDS-C-to-UGAU=>GUUD=>V
Asplenium pekinenseChloroplast2
C-to-U: 1
NA: 1
29387-29476
29475
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Asplenium prolongatumChloroplast2
C-to-U: 1
NA: 1
29162-29251
29250
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium anisopterumChloroplast2
C-to-U: 1
NA: 1
29119-29238
29237
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium opacumChloroplast2
C-to-U: 1
NA: 1
29148-29237
29236
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sheareriChloroplast3
C-to-U: 2
NA: 1
29130-29219
29132
29218
CDS
NA
NA
-
+
NA
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sinenseChloroplast2
C-to-U: 1
NA: 1
29159-29251
29250
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Austroblechnum melanocaulonChloroplast2
C-to-U: 1
NA: 1
29196-29300
29299
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Christella appendiculataChloroplast2
C-to-U: 1
NA: 1
29194-29295
29294
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cypripedium formosanumChloroplast1
NA: 1
56137-56223CDS-NANA=>NANA=>NA
Cyrtomium devexiscapulaeChloroplast2
C-to-U: 1
NA: 1
29308-29397
29396
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cyrtomium falcatumChloroplast2
C-to-U: 1
NA: 1
29446-29535
29534
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cystopteris chinensisChloroplast2
C-to-U: 1
NA: 1
29358-29447
29446
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia lanceaChloroplast2
C-to-U: 1
NA: 1
28835-28924
28923
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia pycnosoraChloroplast2
C-to-U: 1
NA: 1
29114-29203
29202
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia viridifronsChloroplast2
C-to-U: 1
NA: 1
29169-29258
29257
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplaziopsis cavalerianaChloroplast2
C-to-U: 1
NA: 1
29689-29778
29777
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplaziopsis javanicaChloroplast3
C-to-U: 2
NA: 1
29758-29847
29760
29846
CDS
NA
NA
-
+
NA
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium bellumChloroplast2
C-to-U: 1
NA: 1
29113-29202
29201
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dilatatumChloroplast3
C-to-U: 2
NA: 1
28965-29054
28967
29053
NA
NA
CDS
+
-
C-to-U
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dushanenseChloroplast2
C-to-U: 1
NA: 1
29129-29218
29217
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium striatumChloroplast3
C-to-U: 2
NA: 1
28785-28874
28787
28873
NA
NA
CDS
+
-
C-to-U
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium unilobumChloroplast2
C-to-U: 1
NA: 1
29119-29208
29207
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Dryopteris decipiensChloroplast2
C-to-U: 1
NA: 1
29225-29314
29313
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Goodyera fumataChloroplast1
NA: 1
28591-28683CDS+NANA=>NANA=>NA
Habenaria pantlingianaChloroplast1
NA: 1
28172-28258CDS-NANA=>NANA=>NA
Homalosorus pycnocarposChloroplast3
C-to-U: 2
NA: 1
29726-29815
29728
29814
NA
CDS
NA
+
-
C-to-U
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hymenasplenium unilateraleChloroplast1
NA: 1
29267-29356CDS-NANA=>NANA=>NA
Hypodematium crenatumChloroplast2
C-to-U: 1
NA: 1
29248-29337
29336
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Iochroma stenanthumChloroplast1
NA: 1
29469-29564CDS+NANA=>NANA=>NA
Isoetes flaccidaChloroplast1
NA: 1
86968-87057CDS+NANA=>NANA=>NA
Lepisorus clathratusChloroplast2
C-to-U: 1
NA: 1
28131-28220
28219
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Lygodium japonicumChloroplast1
NA: 1
27718-27807CDS+NANA=>NANA=>NA
Macrothelypteris torresianaChloroplast1
NA: 1
29292-29381CDS-NANA=>NANA=>NA
Marsilea crenataChloroplast1
NA: 1
32712-32801CDS-NANA=>NANA=>NA
Masdevallia picturataChloroplast1
NA: 1
28561-28647CDS+NANA=>NANA=>NA
Matteuccia struthiopterisChloroplast3
C-to-U: 2
NA: 1
29388-29477
29390
29476
NA
NA
CDS
+
-
C-to-U
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Myriopteris lindheimeriChloroplast2
C-to-U: 1
NA: 1
29665-29754
29753
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Nothoceros aenigmaticusPlastid2
NA: 2
7266-7355NA
NA
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Onoclea sensibilisChloroplast2
C-to-U: 1
NA: 1
29215-29304
29303
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Osmundastrum cinnamomeumChloroplast1
NA: 1
43040-43129CDS+NANA=>NANA=>NA
Paphiopedilum armeniacumChloroplast1
NA: 1
30096-30188CDS+NANA=>NANA=>NA
Paphiopedilum niveumChloroplast1
NA: 1
29869-29961CDS+NANA=>NANA=>NA
Pseudophegopteris auritaChloroplast2
C-to-U: 1
NA: 1
28924-29013
29012
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Pteridium aquilinum subsp. aquilinumChloroplast2
C-to-U: 1
NA: 1
29623-29712
29711
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhachidosorus consimilisChloroplast2
C-to-U: 1
NA: 1
29733-29822
29821
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Schizaea elegansChloroplast1
C-to-U: 1
22221CDS+C-to-UACG=>AUGT=>M
Schizaea pectinataChloroplast1
C-to-U: 1
21359CDS+C-to-UACG=>AUGT=>M
Stegnogramma sagittifoliaChloroplast2
C-to-U: 1
NA: 1
29243-29332
29331
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Vanilla planifoliaChloroplast1
NA: 1
29988-30080CDS+NANA=>NANA=>NA
Woodsia macrochlaenaChloroplast1
NA: 1
29092-29181CDS-NANA=>NANA=>NA
Woodsia polystichoidesChloroplast1
NA: 1
28868-28957CDS-NANA=>NANA=>NA
Woodwardia unigemmataChloroplast2
C-to-U: 1
NA: 1
29290-29379
29378
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)