atpH - Plant Editosome Database - BIG Data Center

Summary

Gene: atpH
Function: ATP synthase
Species: 49
Editing Factors:1 (DYW2)
Editing Types:
C-to-U (53)
U-to-C (6)
Editing Events: 109 (C-to-U: 53   NA: 50   U-to-C: 6)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Adiantum capillus-venerisChloroplast1
NA: 1
12947-13192CDS-NANA=>NANA=>NA
Alsophila spinulosaChloroplast1
NA: 1
13238-13483CDS-NANA=>NANA=>NA
Ampelopteris proliferaChloroplast2
C-to-U: 1
NA: 1
13362-13607
13606
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Anthoceros angustusChloroplast17
C-to-U: 11
U-to-C: 6
16731
16761
16791
16799
16800
16829
16848
16853
16887
16893
16905
16938
16950
16952
16953
16956
16968
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+U-to-C
C-to-U
U-to-C
U-to-C
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
U-to-C
UAA=>CAA
GCA=>GUA
UAA=>CAA
UUU=>UCU
UUU=>CUU
ACG=>AUG
UCU=>UUU
UCU=>UUU
ACU=>AUU
CCA=>CUA
CCA=>UCA
UCC=>UUC
CCU=>CUU
GUU=>GCU
UCA=>UUA
UCA=>UUA
UUU=>UCU
TERM=>Q
A=>V
TERM=>Q
F=>S
F=>L
T=>M
S=>F
S=>F
T=>I
P=>L
P=>S
S=>F
P=>L
V=>A
S=>L
S=>L
F=>S
Apopellia endiviifoliaChloroplast2
C-to-U: 2
18726
18762
CDS
CDS
+C-to-U
C-to-U
UCA=>UUA
CCG=>CUG
S=>L
P=>L
Asplenium pekinenseChloroplast2
C-to-U: 1
NA: 1
13191-13436
13435
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Asplenium prolongatumChloroplast2
C-to-U: 1
NA: 1
12975-13220
13219
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium anisopterumChloroplast2
C-to-U: 1
NA: 1
13303-13548
13547
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium opacumChloroplast2
C-to-U: 1
NA: 1
13349-13594
13593
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sheareriChloroplast2
C-to-U: 1
NA: 1
13317-13562
13561
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sinenseChloroplast2
C-to-U: 1
NA: 1
13326-13571
13570
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Austroblechnum melanocaulonChloroplast2
C-to-U: 1
NA: 1
13340-13585
13584
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Christella appendiculataChloroplast2
C-to-U: 1
NA: 1
13315-13560
13559
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cyrtomium devexiscapulaeChloroplast2
C-to-U: 1
NA: 1
13445-13690
13689
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cyrtomium falcatumChloroplast2
C-to-U: 1
NA: 1
13584-13829
13828
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cystopteris chinensisChloroplast2
C-to-U: 1
NA: 1
13371-13616
13615
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia lanceaChloroplast2
C-to-U: 1
NA: 1
13016-13261
13260
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia pycnosoraChloroplast2
C-to-U: 1
NA: 1
13293-13538
13537
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia viridifronsChloroplast2
C-to-U: 1
NA: 1
13330-13575
13574
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplaziopsis cavalerianaChloroplast2
C-to-U: 1
NA: 1
13463-13708
13707
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplaziopsis javanicaChloroplast2
C-to-U: 1
NA: 1
13521-13766
13765
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium bellumChloroplast2
C-to-U: 1
NA: 1
13283-13528
13527
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dilatatumChloroplast2
C-to-U: 1
NA: 1
13240-13485
13484
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dushanenseChloroplast2
C-to-U: 1
NA: 1
13297-13542
13541
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium striatumChloroplast2
C-to-U: 1
NA: 1
13270-13515
13514
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium unilobumChloroplast2
C-to-U: 1
NA: 1
13300-13545
13544
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplopterygium glaucumChloroplast1
NA: 1
28248-28493NA-NANA=>NANA=>NA
Dryopteris decipiensChloroplast2
C-to-U: 1
NA: 1
13196-13441
13440
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Homalosorus pycnocarposChloroplast2
C-to-U: 1
NA: 1
13482-13727
13726
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hymenasplenium unilateraleChloroplast2
C-to-U: 1
NA: 1
13263-13508
13507
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hypodematium crenatumChloroplast2
C-to-U: 1
NA: 1
13237-13482
13481
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Lepisorus clathratusChloroplast2
C-to-U: 1
NA: 1
12103-12348
12347
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Lygodium japonicumChloroplast1
NA: 1
13932-14177CDS-NANA=>NANA=>NA
Macrothelypteris torresianaChloroplast2
C-to-U: 1
NA: 1
13379-13624
13623
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Matteuccia struthiopterisChloroplast2
C-to-U: 1
NA: 1
13404-13649
13648
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Myriopteris lindheimeriChloroplast2
C-to-U: 1
NA: 1
13625-13870
13869
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Nothoceros aenigmaticusPlastid2
NA: 2
21309-21554NA
NA
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Onoclea sensibilisChloroplast2
C-to-U: 1
NA: 1
13320-13565
13564
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Osmundastrum cinnamomeumChloroplast1
NA: 1
29265-29510CDS-NANA=>NANA=>NA
Pseudophegopteris auritaChloroplast2
C-to-U: 1
NA: 1
13087-13332
13331
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Pteridium aquilinum subsp. aquilinumChloroplast2
C-to-U: 1
NA: 1
13433-13705
13704
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhachidosorus consimilisChloroplast2
C-to-U: 1
NA: 1
13389-13634
13633
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Schizaea elegansChloroplast2
C-to-U: 1
NA: 1
7001-7246
7245
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Schizaea pectinataChloroplast2
C-to-U: 1
NA: 1
6245-6490
6489
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Stegnogramma sagittifoliaChloroplast2
C-to-U: 1
NA: 1
13305-13550
13549
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Takakia lepidozioidesChloroplast1
NA: 1
20240-20485NA+NANA=>NANA=>NA
Woodsia macrochlaenaChloroplast2
C-to-U: 1
NA: 1
13291-13536
13535
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodsia polystichoidesChloroplast2
C-to-U: 1
NA: 1
13303-13548
13547
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodwardia unigemmataChloroplast2
C-to-U: 1
NA: 1
13324-13569
13568
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)