EMP21 - Plant Editosome Database - CNCB-NGDC

Summary

Editing Factor: EMP21
Synonym: Empty Pericarp21
Description: From a scan of 35 mitochondrial transcripts produced by the Emp21 loss-of-function mutant, the C-to-U editing was found to be abolished at five sites (nad7-77, atp1-1292, atp8-437, nad3-275 and rps4-870), while reduced at 76 sites in 21 transcripts; In consequence, the mutant became deficient with respect to the assembly and activity of mitochondrial complexes I and V; As six of the decreased editing sites in emp21 overlap with the affected editing sites in emp5-1, and the editing efficiency at rpl16-458 showed a substantial reduction in the emp21-1 emp5-4 double mutant compared with the emp21-1 and emp5-4 single mutants, we explored their interaction; These results indicate that EMP21 is a novel PPR-DYW protein required for the editing of ~17% of mitochondrial target Cs, and the editing process may involve an interaction between EMP21 and ZmMORF8 (and probably other proteins)
Protein Family: PPR
Subclass: DYW
Physical Interaction: MORF8
Construct Structure: PLS-E1-E2-DYW
Gene ID & Species: GRMZM5G849971 (Zea mays)
Edited Gene(s): atp1    atp4    atp6    atp8    atp9    ccmB    ccmC    ccmFc    ccmFn    cob    cox1    cox2    cox3    matR    mttB    nad1    nad2    nad3    nad4    nad4L    nad5    nad6    nad7    nad9    rpl16    rps1    rps12    rps12_ct    rps13    rps2A    rps2B    rps3    rps4    rps7
Editing Type(s): C-to-U (1972)
Publication(s): [1] Empty Pericarp21 encodes a novel PPR-DYW protein that is required for mitochondrial RNA editing at multiple sites, complexes I and V biogenesis, and seed development in maize., PLoS genetics, 2019. [PMID=31374076]

Editing Details

Species Gene ID Organelle Edited Gene Position Region Nuclear Genome Organelle Genome Other Position Region Other Position Editing Type Codon Amino Acid Molecular Effect Experiment Details
Zea mays GRMZM5G849971 Mitochondrion atp1 1178 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.53%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.20%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.79%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.41%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp1 1292 CDS NA NA NA NA C-to-U CCC=>CUC P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.46%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.37%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.00%UneditedAbsent31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.00%UneditedAbsent31374076
Zea mays GRMZM5G849971 Mitochondrion atp1 1490 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.47%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.10%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.88%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.63%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp1 1499 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.46%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.88%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.49%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.45%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp1 30 CDS NA NA NA NA C-to-U CUC=>CUU L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons54.37%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons29.60%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons25.59%LowSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons28.32%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp4 118 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.45%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.20%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.24%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.07%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp4 360 CDS NA NA NA NA C-to-U UGC=>UGU C=>C Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.59%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons73.24%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons64.41%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.48%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp4 40 CDS NA NA NA NA C-to-U CUA=>UUA L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.15%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.43%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.88%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.27%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp4 407 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.63%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.85%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.94%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.10%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp4 428 CDS NA NA NA NA C-to-U ACU=>AUU T=>I Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.39%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.80%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.38%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.31%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp4 56 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.17%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.87%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.66%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.71%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp4 59 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.14%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.57%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.52%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.55%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp4 71 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.37%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.55%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.46%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.64%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp4 76 CDS NA NA NA NA C-to-U CCG=>UCG P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.00%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.80%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.35%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.84%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp4 89 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.49%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.72%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.66%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.19%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 1050 CDS NA NA NA NA C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.49%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons22.01%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons9.87%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons17.31%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 1124 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.93%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.78%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.62%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.59%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 1132 CDS NA NA NA NA C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.28%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.85%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.11%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.45%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 1139 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.06%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.32%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.00%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.68%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 1148 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.37%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.33%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.36%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.19%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 1175 CDS NA NA NA NA C-to-U ACA=>AUA T=>I Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.55%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.28%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.83%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.18%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 1186 CDS NA NA NA NA C-to-U CAA=>UAA Q=>Stop codon Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.10%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.56%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.64%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.35%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 515 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.01%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.03%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.01%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.25%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 531 CDS NA NA NA NA C-to-U CUC=>CUU L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons9.76%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons11.43%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons12.82%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons21.82%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 584 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.78%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.70%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.79%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.94%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 635 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.46%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.48%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.40%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.95%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 704 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.28%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.19%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.51%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.12%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 722 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.43%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.12%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.16%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.08%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 730 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.32%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.00%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.08%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.80%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 737 CDS NA NA NA NA C-to-U CCC=>CUC P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.89%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.82%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.99%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.64%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 738 CDS NA NA NA NA C-to-U CCC=>CCU P=>P Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.21%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.58%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.09%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.56%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 931 CDS NA NA NA NA C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.11%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.98%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.05%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.61%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 953 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons63.95%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons66.76%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.40%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons72.87%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp6 995 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.91%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.44%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.53%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.53%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp8 123 CDS NA NA NA NA C-to-U CUC=>CUU L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons79.47%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.77%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons63.82%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons69.28%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion atp8 200 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.45%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.27%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.09%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.44%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp8 436 CDS NA NA NA NA C-to-U CCA=>UCA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons79.37%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.01%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons61.46%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons61.79%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion atp8 437 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.69%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.30%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.00%UneditedAbsent31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.00%UneditedAbsent31374076
Zea mays GRMZM5G849971 Mitochondrion atp8 58 CDS NA NA NA NA C-to-U CUC=>UUC L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.13%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.41%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.65%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.70%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp9 134 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.84%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.31%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.34%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.61%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp9 182 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.71%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.30%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.21%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.01%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp9 191 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.85%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.89%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.58%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.62%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp9 20 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.13%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.03%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.21%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.88%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp9 212 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.43%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.85%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.94%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.29%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp9 82 CDS NA NA NA NA C-to-U CUC=>UUC L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.20%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.53%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.20%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.90%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp9 92 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.97%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.64%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.05%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.67%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion atp9 NA 3'UTR NA NA NA 228 C-to-U UUC=>UUU NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons12.61%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons26.38%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons21.45%LowSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons40.53%MediumSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 128 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.90%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.82%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.43%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.52%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 137 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.92%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.54%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons70.61%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons71.21%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 149 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.04%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.94%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons56.47%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons57.93%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 154 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.76%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.37%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.13%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.09%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 172 CDS NA NA NA NA C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.77%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.20%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons72.98%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons69.12%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 179 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.08%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons79.83%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.14%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.98%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 181 CDS NA NA NA NA C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.15%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.85%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.73%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.12%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 183 CDS NA NA NA NA C-to-U CCC=>CCU P=>P Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons42.87%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons33.17%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons26.94%LowSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons37.32%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 193 CDS NA NA NA NA C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons79.87%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.07%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons66.00%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons59.87%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 194 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons73.82%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons71.05%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons58.54%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons57.83%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 28 CDS NA NA NA NA C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.61%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.91%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons72.07%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.35%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 286 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.70%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons65.48%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons52.72%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons56.26%MediumSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 304 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.55%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons66.61%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons55.15%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons56.37%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 337 CDS NA NA NA NA C-to-U CCG=>UCG P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons50.17%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons47.87%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons41.92%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons36.50%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 338 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.10%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.10%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons71.44%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.48%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 367 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.85%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.20%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons65.18%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons69.90%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 379 CDS NA NA NA NA C-to-U CUA=>UUA L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons68.01%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons69.85%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons44.85%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons56.17%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 392 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.04%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.26%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.30%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.73%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 406 CDS NA NA NA NA C-to-U CUG=>UUG L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons11.33%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons26.15%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.00%UneditedSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons12.45%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 424 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.67%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.87%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.09%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons68.12%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 428 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.27%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.85%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.88%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.66%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 43 CDS NA NA NA NA C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.30%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.61%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.51%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.51%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 467 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.83%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.42%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.34%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons73.96%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 475 CDS NA NA NA NA C-to-U CCA=>UCA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.55%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.93%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.54%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons65.23%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 476 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.27%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.59%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.54%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons65.02%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 485 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.42%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.40%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.22%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.42%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 503 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.48%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.15%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.95%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons72.47%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 512 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.48%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.94%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.26%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons72.73%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 514 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.22%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.97%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.05%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.25%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 551 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.02%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.12%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.63%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.91%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 554 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.42%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.01%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons69.31%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons72.93%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 566 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.65%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.65%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.75%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.40%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 569 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.40%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.77%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.78%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.15%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 572 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.84%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.38%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons68.54%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons68.00%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 583 CDS NA NA NA NA C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons31.74%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons37.59%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons20.51%LowSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons46.83%MediumSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 596 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.93%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons79.42%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.73%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.11%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 611 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons68.12%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons65.00%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons49.09%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons41.77%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 80 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.72%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.88%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.15%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.34%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 87 CDS NA NA NA NA C-to-U AUC=>AUU I=>I Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.19%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.61%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.44%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.80%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmB 93 CDS NA NA NA NA C-to-U GUC=>GUU V=>V Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.42%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons40.49%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons17.00%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.68%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmC 103 CDS NA NA NA NA C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.29%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.73%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons3.31%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons3.71%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmC 227 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.10%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.20%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons2.73%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons1.90%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmC 446 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons7.68%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons8.18%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.92%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons1.69%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 103 CDS NA NA NA NA C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.86%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.82%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.57%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.18%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 1124 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.56%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.97%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.30%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.06%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 1144 CDS NA NA NA NA C-to-U CCG=>UCG P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.26%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.56%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.29%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.60%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 1145 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.84%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.06%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons68.02%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons68.57%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 119 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.54%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.14%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.48%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.10%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 1219 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.56%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.86%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.18%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.19%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 122 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.57%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.96%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.57%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.53%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 123 CDS NA NA NA NA C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.13%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.85%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.89%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.46%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 1244 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.65%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.06%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons71.44%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons69.21%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 1300 CDS NA NA NA NA C-to-U CGA=>UGA R=>Stop codon Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons70.35%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons67.45%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.53%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.05%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 146 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.54%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.06%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.96%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.81%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 160 CDS NA NA NA NA C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons73.37%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons72.14%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons51.43%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons50.49%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 306 CDS NA NA NA NA C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.53%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.34%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.87%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.75%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 325 CDS NA NA NA NA C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.56%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.88%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.93%HighIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.17%HighIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 38 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.93%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.25%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.21%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.34%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 39 CDS NA NA NA NA C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons34.35%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons20.40%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons11.68%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.96%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 397 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.61%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.73%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.11%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.05%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 50 CDS NA NA NA NA C-to-U CCC=>CUC P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.67%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.45%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.18%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.60%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 52 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.13%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.33%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.34%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.28%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 543 CDS NA NA NA NA C-to-U GUC=>GUU V=>V Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.26%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.90%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons67.86%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons67.34%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 799 CDS NA NA NA NA C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.73%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.79%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.14%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.28%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 866 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.83%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.88%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.33%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.32%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 87 CDS NA NA NA NA C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons25.84%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons27.42%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons40.56%MediumIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons40.76%MediumIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 906 CDS NA NA NA NA C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons63.17%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons63.75%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons41.11%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons41.73%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFc 966 CDS NA NA NA NA C-to-U CCC=>CCU P=>P Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.07%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.84%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons56.05%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons54.73%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 1214 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons21.93%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons21.50%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons37.51%LowIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons37.04%LowIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 1325 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.70%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.74%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.97%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.59%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 1342 CDS NA NA NA NA C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.23%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.15%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons68.76%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons70.78%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 1357 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.59%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.02%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.07%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.50%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 137 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.08%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.91%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.90%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.14%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 1375 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.36%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.92%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.46%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.40%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 1408 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.24%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.49%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.78%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.66%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 1419 CDS NA NA NA NA C-to-U GCC=>GCU A=>A Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons8.33%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons9.02%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.62%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.22%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 1469 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.62%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.91%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.23%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.61%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 1474 CDS NA NA NA NA C-to-U CUG=>UUG L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons7.94%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.89%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons8.49%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons8.14%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 1489 CDS NA NA NA NA C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.14%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.09%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.48%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.96%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 1492 CDS NA NA NA NA C-to-U CCA=>UCA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons26.35%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons44.20%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons17.14%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons17.21%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 1493 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.61%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.49%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons65.23%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons65.47%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 1505 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.02%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.72%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.62%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.30%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 1540 CDS NA NA NA NA C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.94%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.81%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.64%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.55%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 1553 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.50%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.52%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.52%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.34%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 1588 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.99%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.17%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.60%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.95%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 1709 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.34%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons15.03%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons12.25%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons12.73%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 176 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.26%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.69%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.32%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.61%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 181 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.37%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.54%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.80%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.83%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 190 CDS NA NA NA NA C-to-U CCA=>UCA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.01%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.02%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.28%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.03%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 287 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.14%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.13%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.80%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.75%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 302 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.08%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.40%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.12%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.49%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 318 CDS NA NA NA NA C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons45.73%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons55.87%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons25.44%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons25.01%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 401 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.62%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.74%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.60%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.76%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 410 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.94%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.12%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.96%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.62%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 417 CDS NA NA NA NA C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.99%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.52%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.64%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.87%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 514 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons31.83%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons39.28%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons47.47%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons48.34%MediumSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 595 CDS NA NA NA NA C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons69.30%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons72.67%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons47.92%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons47.31%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 743 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.03%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.53%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.04%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.08%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 752 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.79%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.90%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.27%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.60%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 76 CDS NA NA NA NA C-to-U CCG=>UCG P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.69%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.76%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.53%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.09%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 762 CDS NA NA NA NA C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons26.83%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons32.42%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons42.50%MediumIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons42.43%MediumIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 77 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons39.79%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons43.36%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons57.36%MediumIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons57.03%MediumIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 790 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.55%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.26%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.80%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.31%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 812 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.94%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.23%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.05%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.63%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 824 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.95%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.96%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.67%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.68%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 839 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.40%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.03%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.06%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.20%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn 988 CDS NA NA NA NA C-to-U CGC=>UGC R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.92%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.85%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.89%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.26%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion ccmFn NA 3'UTR NA NA NA 1918 C-to-U CAU=>UAU NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.51%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.94%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.09%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.29%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cob 1098 CDS NA NA NA NA C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons57.33%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons62.66%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.03%HighIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons79.43%HighIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion cob 1124 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.59%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.14%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.97%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.81%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cob 286 CDS NA NA NA NA C-to-U CUC=>UUC L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.81%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.85%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.83%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.50%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cob 298 CDS NA NA NA NA C-to-U CAC=>UAC H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.98%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.84%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.84%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.71%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cob 325 CDS NA NA NA NA C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.54%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.88%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.05%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.58%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cob 419 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.47%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.98%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.26%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.42%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cob 564 CDS NA NA NA NA C-to-U CUC=>CUU L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.10%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.22%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons69.17%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.84%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion cob 568 CDS NA NA NA NA C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.48%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.49%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.82%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.86%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cob 580 CDS NA NA NA NA C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.87%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.12%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.62%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.70%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cob 680 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.32%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.19%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.54%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.38%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cob 715 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.20%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.02%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.94%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.41%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cob 725 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.88%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.33%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.56%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.24%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cob 808 CDS NA NA NA NA C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.36%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.10%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.72%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.25%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cob 853 CDS NA NA NA NA C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.53%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.43%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.76%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.21%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cob 908 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.64%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons79.52%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.68%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.36%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cob 982 CDS NA NA NA NA C-to-U CAC=>UAC H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.76%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.19%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.25%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.22%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cob NA 3'UTR NA NA NA 1171 C-to-U UCA=>UUA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.25%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.00%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.80%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.31%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox1 1402 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.50%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.10%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.31%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.33%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox1 1405 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.01%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.91%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.67%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.24%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox1 1433 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.28%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.84%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.21%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.81%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox1 1489 CDS NA NA NA NA C-to-U CCA=>UCA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.01%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.24%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.20%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.07%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox1 15 CDS NA NA NA NA C-to-U GUC=>GUU V=>V Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.04%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.15%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.57%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.04%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 14 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.10%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.95%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.32%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.12%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 144 CDS NA NA NA NA C-to-U CUC=>CUU L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.86%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.64%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.53%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.62%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 162 CDS NA NA NA NA C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons25.35%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons29.19%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons39.82%LowIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons57.55%MediumIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 167 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.86%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.53%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.45%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.79%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 169 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.70%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.42%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.41%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.66%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 259 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.52%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.55%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.67%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.58%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 284 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.51%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.65%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.54%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.15%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 30 CDS NA NA NA NA C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.24%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons29.60%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons13.02%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons13.06%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 31 CDS NA NA NA NA C-to-U CUC=>UUC L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons47.46%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons53.77%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons42.04%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons46.30%MediumSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 385 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.52%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.09%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.20%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.21%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 449 CDS NA NA NA NA C-to-U ACG=>AUG T=>M Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.92%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.88%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.88%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.54%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 466 CDS NA NA NA NA C-to-U CCA=>UCA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.97%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.37%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.87%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.58%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 467 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.32%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.17%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.22%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.60%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 482 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.54%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons71.92%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.58%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons61.92%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 550 CDS NA NA NA NA C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.80%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.70%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.72%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.02%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 563 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.86%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.12%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.45%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.92%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 587 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.42%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.36%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.88%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.14%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 620 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons67.20%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.67%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.80%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons73.46%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 638 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons36.61%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons58.04%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons44.44%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons45.56%MediumSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 704 CDS NA NA NA NA C-to-U ACG=>AUG T=>M Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.40%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.45%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.48%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.59%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox2 77 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.01%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.31%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.73%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.86%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion cox3 245 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons70.92%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons70.17%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.56%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.42%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion cox3 257 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons69.00%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons70.45%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.43%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons27.00%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion cox3 289 CDS NA NA NA NA C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons73.53%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.82%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons45.91%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons61.05%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion cox3 311 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons61.90%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons64.27%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons30.80%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons35.43%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion cox3 314 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons70.04%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons72.39%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons38.36%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons54.40%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion cox3 413 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.50%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.52%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons44.24%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons44.93%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion cox3 422 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.39%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons73.77%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons37.98%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons37.82%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion cox3 527 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.36%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.55%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons47.72%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons52.26%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion cox3 566 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.04%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons73.48%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons45.67%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons46.77%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion cox3 69 CDS NA NA NA NA C-to-U CUC=>CUU L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons39.31%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons48.60%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons15.40%PoorDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons22.60%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion cox3 754 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.44%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.99%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons57.20%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons61.36%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion cox3 764 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.00%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.71%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons48.07%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons51.91%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion matR 1124 CDS NA NA NA NA C-to-U CCC=>CUC P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.97%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.24%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.90%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.47%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion matR 17 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons54.39%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons59.09%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons41.60%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons46.84%MediumSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion matR 1730 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons71.82%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons73.14%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons50.08%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons60.81%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion matR 1751 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.68%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.06%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.91%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.73%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion matR 1785 CDS NA NA NA NA C-to-U UAC=>UAU Y=>Y Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.97%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons40.50%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons22.71%LowSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons39.80%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion matR 1877 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.27%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.96%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.11%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.58%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion matR 1885 CDS NA NA NA NA C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.81%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.38%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.24%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.81%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion matR 1895 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.88%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.60%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons73.99%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.05%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion matR 1905 CDS NA NA NA NA C-to-U GUC=>GUU V=>V Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons29.88%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons39.31%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.88%LowSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons32.83%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion matR 295 CDS NA NA NA NA C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons40.81%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons54.42%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons27.44%LowSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons39.43%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion matR 296 CDS NA NA NA NA C-to-U CCC=>CUC P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.13%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.37%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons51.75%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons68.16%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion matR 86 CDS NA NA NA NA C-to-U CCC=>CUC P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.99%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.38%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.72%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.20%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion matR 92 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons54.80%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons45.13%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons49.80%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons49.77%MediumSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion mttB 127 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.35%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons21.10%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons23.75%LowSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons21.39%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion mttB 205 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons7.66%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons9.11%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.00%UneditedSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons8.92%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion mttB 215 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons9.83%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.31%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.00%UneditedSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons9.06%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion mttB 373 CDS NA NA NA NA C-to-U CGC=>UGC R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons12.13%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons17.45%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons22.19%LowSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons19.67%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion mttB 532 CDS NA NA NA NA C-to-U CCA=>UCA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons46.26%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons49.47%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons35.68%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons33.92%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 138 CDS NA NA NA NA C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons11.51%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons14.11%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons11.71%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons15.28%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 2 CDS NA NA NA NA C-to-U ACG=>AUG T=>Start codo Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.67%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.80%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.93%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.24%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 215 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.88%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.22%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.79%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.01%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 307 CDS NA NA NA NA C-to-U CCG=>UCG P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.69%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.17%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.71%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.27%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 308 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.56%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.32%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.60%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.92%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 490 CDS NA NA NA NA C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.87%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.66%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.74%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 492 CDS NA NA NA NA C-to-U CCC=>CCU P=>P Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.07%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.86%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.98%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.41%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 500 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.74%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.55%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.85%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 536 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.89%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.25%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.64%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.90%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 537 CDS NA NA NA NA C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons49.22%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons49.45%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons79.71%HighIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.16%HighIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 555 CDS NA NA NA NA C-to-U CCC=>CCU P=>P Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.30%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.98%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.15%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.50%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 571 CDS NA NA NA NA C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.18%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.58%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.70%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.49%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 577 CDS NA NA NA NA C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.10%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.69%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.19%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.39%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 580 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.58%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.38%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.53%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 608 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.88%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.81%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.71%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 635 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.95%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.41%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.60%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 674 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.98%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.87%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.95%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 679 CDS NA NA NA NA C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons19.43%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons21.94%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons21.93%LowSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons20.21%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 734 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.86%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.83%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.86%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 743 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.78%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.57%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 755 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.48%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.83%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 779 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.34%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.47%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.64%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.44%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 823 CDS NA NA NA NA C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.09%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.86%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.57%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.41%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 835 CDS NA NA NA NA C-to-U CUA=>UUA L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons9.46%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons13.85%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons14.82%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons22.40%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 898 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.97%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.51%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.70%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.97%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 928 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.02%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.72%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.60%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.79%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 937 CDS NA NA NA NA C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.59%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons70.32%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons66.24%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons71.86%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad1 953 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.18%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.87%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.30%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.18%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 1028 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.89%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.92%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.89%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 1058 CDS NA NA NA NA C-to-U CCA=>UCA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.95%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.86%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.90%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 1246 CDS NA NA NA NA C-to-U CCA=>UCA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.88%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.88%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.78%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 1247 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.22%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.85%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 1276 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.38%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.56%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 1298 CDS NA NA NA NA C-to-U GCG=>GUG A=>V Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.80%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.56%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.94%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 1400 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.54%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.72%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.90%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.37%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 1403 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.58%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.57%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.38%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.83%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 1408 CDS NA NA NA NA C-to-U CCA=>UCA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.37%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.53%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.52%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.78%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 1409 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.10%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.49%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons57.99%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons67.51%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 1416 CDS NA NA NA NA C-to-U CCC=>CCU P=>P Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.62%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.55%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.55%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.68%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 1457 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.85%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.71%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.87%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 26 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.12%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.80%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.78%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.26%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 303 CDS NA NA NA NA C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons23.88%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons19.71%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons33.77%LowIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons44.01%MediumIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 308 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.69%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.82%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.98%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.64%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 356 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.07%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.75%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.61%HighIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.51%HighIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 361 CDS NA NA NA NA C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.86%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.88%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.69%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 367 CDS NA NA NA NA C-to-U CGC=>UGC R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.36%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.08%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.56%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.86%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 388 CDS NA NA NA NA C-to-U CCG=>UCG P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.89%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 394 CDS NA NA NA NA C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.98%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.99%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.97%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.97%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 453 CDS NA NA NA NA C-to-U AUC=>AUU I=>I Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons8.96%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons30.55%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.01%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.21%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 497 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.95%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.67%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.95%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.96%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 523 CDS NA NA NA NA C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.93%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.89%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.56%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.75%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 621 CDS NA NA NA NA C-to-U AUC=>AUU I=>I Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.78%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.97%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.98%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.97%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 677 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.15%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.75%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.83%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.86%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 788 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.63%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.24%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.85%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 800 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.97%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.87%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.86%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.87%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 809 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.80%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.80%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.98%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.64%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 920 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.93%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.87%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.63%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.67%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 928 CDS NA NA NA NA C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.78%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.82%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 958 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.73%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.72%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.85%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 962 CDS NA NA NA NA C-to-U ACU=>AUU T=>I Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.14%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.02%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.87%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.65%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad2 NA 5'UTR NA NA NA -8 C-to-U UCG=>UUG NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons8.27%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons9.86%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.12%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.00%UneditedSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 137 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.55%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.52%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons46.52%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons59.96%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 138 CDS NA NA NA NA C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.45%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons15.81%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.00%UneditedSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons12.39%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 146 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons55.15%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons61.35%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.08%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons28.62%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 185 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.09%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons71.42%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons60.46%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons73.04%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 190 CDS NA NA NA NA C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons67.10%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons67.12%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons32.85%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons43.49%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 208 CDS NA NA NA NA C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons48.21%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons54.01%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons22.38%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons25.73%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 209 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons58.49%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons59.61%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons32.78%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons37.55%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 215 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons39.05%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons44.42%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons19.72%PoorDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons23.07%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 230 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons29.23%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons38.38%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons14.13%PoorDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons18.05%PoorDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 247 CDS NA NA NA NA C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons42.43%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons44.03%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons14.44%PoorDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons21.73%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 251 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons25.16%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons32.79%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.91%PoorDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons15.37%PoorDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 275 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons11.80%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons18.36%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.00%UneditedAbsent31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.00%UneditedAbsent31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 317 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons66.68%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons61.25%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons29.42%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons25.52%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 344 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons55.10%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons56.96%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons28.25%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons33.54%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 349 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons50.28%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons49.16%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons31.31%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons29.86%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 39 CDS NA NA NA NA C-to-U AUC=>AUU I=>I Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons14.86%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons21.32%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons12.35%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons16.81%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 44 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons61.27%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons44.05%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons30.16%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons22.12%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 5 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons33.11%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons59.21%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons12.15%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.54%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 61 CDS NA NA NA NA C-to-U CCA=>UCA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons54.13%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons44.50%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons26.28%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons20.61%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 62 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons45.10%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons41.91%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons17.81%PoorDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons17.60%PoorDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad3 80 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons52.82%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons57.65%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons29.98%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons39.86%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 107 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.82%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.88%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.79%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.86%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 1373 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.80%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.17%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.54%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.72%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 1405 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.69%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.90%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.86%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.63%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 1417 CDS NA NA NA NA C-to-U CAC=>UAC H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.54%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.53%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.14%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.01%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 1432 CDS NA NA NA NA C-to-U CCG=>UCG P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.91%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.24%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.50%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.01%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 1433 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.36%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.49%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.71%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 1452 CDS NA NA NA NA C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons15.97%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons13.23%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons12.77%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons14.59%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 154 CDS NA NA NA NA C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.75%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.20%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.85%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.57%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 156 CDS NA NA NA NA C-to-U CCC=>CCU P=>P Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons40.06%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons39.22%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.20%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons25.23%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 158 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.89%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.63%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.76%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.86%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 164 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.27%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.56%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.29%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.88%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 166 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.94%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.98%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.99%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 197 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.81%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.90%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.82%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.85%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 317 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.97%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.99%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.93%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.96%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 362 CDS NA NA NA NA C-to-U ACA=>AUA T=>I Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.89%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.87%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.74%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 376 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.93%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 401 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.74%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.90%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.77%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 416 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.69%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.68%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.64%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.83%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 433 CDS NA NA NA NA C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.33%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.28%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.79%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.84%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 437 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.45%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.78%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 44 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.08%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.38%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.74%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.88%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 449 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.87%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.66%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.80%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.42%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 74 CDS NA NA NA NA C-to-U ACU=>AUU T=>I Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.62%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.26%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.85%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.81%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 77 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.79%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.53%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.66%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 819 CDS NA NA NA NA C-to-U CCC=>CCU P=>P Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons62.77%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons63.15%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.13%HighIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.57%HighIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 84 CDS NA NA NA NA C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons25.54%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons23.18%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons13.81%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons13.99%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 977 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.33%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.13%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.62%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.55%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4 NA 5'UTR NA NA NA -7 C-to-U UUC=>UUU NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons23.26%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.27%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons15.01%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons14.87%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4L 110 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.82%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons11.74%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons11.81%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.00%UneditedSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4L 179 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons22.26%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons11.16%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons18.02%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons22.88%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad4L 41 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons14.17%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.00%UneditedNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons12.26%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons26.71%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad5 1183 CDS NA NA NA NA C-to-U CUA=>UUA L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons29.11%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.11%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons13.22%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons13.63%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad5 1490 CDS NA NA NA NA C-to-U CCC=>CUC P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.84%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.90%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.92%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.83%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad5 1494 CDS NA NA NA NA C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons30.30%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons28.74%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons52.70%MediumIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons51.23%MediumIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad5 1550 CDS NA NA NA NA C-to-U ACA=>AUA T=>I Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.74%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.90%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.79%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.74%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad5 1567 CDS NA NA NA NA C-to-U CUG=>UUG L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons66.63%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons66.58%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons64.41%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons63.93%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad5 1580 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.98%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.57%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.75%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.75%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad5 1589 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.82%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.67%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.90%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.79%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad5 1665 CDS NA NA NA NA C-to-U CUC=>CUU L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.16%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.97%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.99%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.44%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad5 1859 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.84%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.52%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.93%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.83%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad5 1895 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.90%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.93%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad5 1900 CDS NA NA NA NA C-to-U CCA=>UCA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.50%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.75%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.89%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad5 1901 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.51%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.35%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.95%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.73%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad5 1916 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.25%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.00%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.79%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.65%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad5 1918 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.64%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.02%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.66%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad5 2005 CDS NA NA NA NA C-to-U CAA=>UAA Q=>Stop codon Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons15.10%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons13.83%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.30%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons11.55%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad6 -3 CDS NA NA NA NA C-to-U CCA=>UCA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons25.51%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons32.53%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons27.15%LowSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons47.99%MediumSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad6 138 CDS NA NA NA NA C-to-U CUC=>CUU L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons31.93%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons37.26%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons18.44%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons32.29%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad6 146 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.94%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.37%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons63.56%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons62.34%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad6 159 CDS NA NA NA NA C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons38.46%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons46.91%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons15.60%PoorDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons26.45%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad6 161 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.72%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.60%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons69.93%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.99%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad6 169 CDS NA NA NA NA C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.05%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.67%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.56%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.58%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad6 191 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.60%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.26%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.31%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.97%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad6 196 CDS NA NA NA NA C-to-U CUA=>UUA L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons16.54%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons15.02%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons14.94%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons17.12%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad6 25 CDS NA NA NA NA C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.51%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.86%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons37.97%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons40.68%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad6 26 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.43%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.28%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.46%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.98%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad6 446 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.31%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.32%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons72.27%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.92%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad6 569 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.21%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.92%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.77%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.60%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad6 88 CDS NA NA NA NA C-to-U CCC=>UCC P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.37%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.13%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.43%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.33%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad6 89 CDS NA NA NA NA C-to-U CCC=>CUC P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.10%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.95%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.28%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.11%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad6 NA 5'UTR NA NA NA -45 C-to-U CCC=>UCC NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons14.98%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons15.03%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons12.36%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons12.06%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 1088 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.84%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.77%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.84%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.67%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 1103 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.42%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.80%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.86%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.96%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 1124 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.54%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.93%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.96%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.38%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 137 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.63%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.74%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.65%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.73%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 209 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.91%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.84%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.58%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.98%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 224 CDS NA NA NA NA C-to-U ACG=>AUG T=>M Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.79%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.06%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 244 CDS NA NA NA NA C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.90%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.84%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.52%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 251 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.92%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.95%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.89%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 255 CDS NA NA NA NA C-to-U GCC=>GCU A=>A Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons34.46%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons47.85%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons48.41%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons63.82%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 315 CDS NA NA NA NA C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.96%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.90%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.93%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 335 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.97%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 344 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.99%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.97%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.51%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 353 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.99%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.96%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.69%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 38 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.41%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.78%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.71%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.86%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 383 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.83%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.95%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.91%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.78%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 44 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.74%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.67%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.91%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 445 CDS NA NA NA NA C-to-U CCG=>UCG P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.45%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.90%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.78%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.75%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 45 CDS NA NA NA NA C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.67%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.62%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 533 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.27%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.08%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.02%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.89%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 578 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.67%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.93%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.89%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.90%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 679 CDS NA NA NA NA C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.21%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.82%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.69%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.06%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 698 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.97%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.29%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.63%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.86%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 724 CDS NA NA NA NA C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.98%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.80%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.81%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 734 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.26%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.45%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.45%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.59%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 739 CDS NA NA NA NA C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.81%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.91%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.68%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.41%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 769 CDS NA NA NA NA C-to-U CGC=>UGC R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.87%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons100.00%CompleteSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.88%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 77 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.68%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.47%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.00%UneditedAbsent31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.00%UneditedAbsent31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 83 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.73%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.78%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.96%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.68%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 836 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.93%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.81%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.82%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.87%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 926 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.88%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.94%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.65%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.75%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 973 CDS NA NA NA NA C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.62%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.71%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.57%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.40%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 99 CDS NA NA NA NA C-to-U AAC=>AAU N=>N Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons57.54%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons68.35%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons61.70%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.14%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad7 NA 5'UTR NA NA NA -7 C-to-U UUC=>UUU NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons9.93%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons15.55%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons29.42%LowIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons34.07%LowIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad9 111 CDS NA NA NA NA C-to-U UAC=>UAU Y=>Y Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons15.18%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons14.39%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons11.87%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons18.98%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad9 113 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.45%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.00%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons67.20%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.43%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad9 14 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.81%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.66%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons71.75%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.54%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad9 167 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.18%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.44%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.17%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.40%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad9 190 CDS NA NA NA NA C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.14%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.97%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons56.40%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons58.03%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad9 223 CDS NA NA NA NA C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.49%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.55%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons72.52%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.25%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad9 298 CDS NA NA NA NA C-to-U CCG=>UCG P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.13%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.88%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.07%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.19%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad9 311 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.31%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.48%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons79.62%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.24%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad9 328 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.54%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.78%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons79.46%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.50%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad9 356 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons79.72%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.75%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons51.80%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons70.13%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion nad9 368 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.28%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.90%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons71.27%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.43%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad9 398 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.47%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.11%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.46%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.56%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion nad9 92 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.25%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.79%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons66.35%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons72.77%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rpl16 184 CDS NA NA NA NA C-to-U CGC=>UGC R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.30%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.79%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.70%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.86%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rpl16 225 CDS NA NA NA NA C-to-U GGC=>GGU G=>G Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.60%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.48%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.48%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.89%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rpl16 227 CDS NA NA NA NA C-to-U ACC=>AUC T=>I Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.95%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.49%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.01%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.39%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rpl16 228 CDS NA NA NA NA C-to-U ACC=>ACU T=>T Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons38.78%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons40.38%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons28.29%LowSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons50.17%MediumSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rpl16 287 CDS NA NA NA NA C-to-U ACA=>AUA T=>I Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons73.96%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.65%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.11%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.09%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rpl16 355 CDS NA NA NA NA C-to-U CUC=>UUC L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.80%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.81%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons61.43%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons71.65%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rpl16 444 CDS NA NA NA NA C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons62.41%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons59.61%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons67.82%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons73.90%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rpl16 458 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.93%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.61%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.02%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons79.28%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion rpl16 48 CDS NA NA NA NA C-to-U CUC=>CUU L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.47%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.61%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.33%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons67.71%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion rpl16 524 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.67%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.05%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.21%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.50%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rpl16 530 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.80%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.60%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.54%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.99%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rpl16 79 CDS NA NA NA NA C-to-U CAG=>UAG Q=>Stop codon Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.08%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons72.65%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.44%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.14%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rpl16 93 CDS NA NA NA NA C-to-U UGC=>UGU C=>C Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.83%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.57%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.58%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.20%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps1 107 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons60.20%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons59.23%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons28.98%LowSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons36.97%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps1 377 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.21%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.34%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons72.65%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.55%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps1 505 CDS NA NA NA NA C-to-U CAA=>UAA Q=>Stop codon Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons15.65%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.07%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons21.78%LowSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons17.47%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps12 196 CDS NA NA NA NA C-to-U CAC=>UAC H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.46%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.94%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons71.69%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.38%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps12 221 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons69.38%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons59.05%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons47.93%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons55.54%MediumSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps12 269 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons70.06%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons65.77%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons57.26%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.07%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps12 284 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.40%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons70.78%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons60.45%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.08%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps12 289 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons40.09%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons36.24%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons39.99%LowSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons57.02%MediumSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps12 71 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.91%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons65.87%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons33.98%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons45.70%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion rps12_ct NA Intron NA NA NA 418 C-to-U CAA=>UAA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.15%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.45%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons39.39%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons30.03%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion rps13 100 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons63.73%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons67.58%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons44.89%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons60.82%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps13 256 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons60.96%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons70.22%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons43.46%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons48.74%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion rps13 26 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons79.29%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.37%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons56.31%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons70.06%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps13 287 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons51.23%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons65.96%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons40.52%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons53.62%MediumSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps13 5 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons63.84%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.71%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons44.26%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons61.85%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps13 56 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons45.25%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons61.64%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons36.62%LowSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons54.36%MediumSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps2A 200 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons68.78%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons67.03%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.67%HighIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.45%HighIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion rps2A 449 CDS NA NA NA NA C-to-U GCA=>GUA A=>V Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons54.56%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons55.65%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.08%HighIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.47%HighIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion rps2A 514 CDS NA NA NA NA C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons51.13%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons51.30%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons90.77%HighIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.41%HighIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion rps2A 541 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons50.19%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons50.66%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.42%HighIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.71%HighIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion rps2A 548 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons58.11%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons58.70%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.59%HighIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.82%HighIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion rps2B 15 CDS NA NA NA NA C-to-U GUC=>GUU V=>V Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons57.14%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons57.19%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons44.12%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons60.72%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps2B 206 CDS NA NA NA NA C-to-U UCC=>UUC S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.72%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons85.89%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons73.95%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.72%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps2B 455 CDS NA NA NA NA C-to-U GCA=>GUA A=>V Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.49%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.95%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons94.04%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.17%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps2B 510 CDS NA NA NA NA C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.76%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.50%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons19.84%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons31.89%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps2B 526 CDS NA NA NA NA C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons8.67%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons10.83%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons9.04%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons15.95%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps2B 550 CDS NA NA NA NA C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.24%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.77%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.76%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.88%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps2B 557 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.30%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons93.37%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.92%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.14%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps3 1019 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons70.00%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons69.67%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons66.78%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons68.08%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps3 1066 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons19.78%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons19.77%PoorNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons41.83%MediumIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons40.95%MediumIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion rps3 1576 CDS NA NA NA NA C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.12%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.96%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons89.45%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.46%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps3 1607 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.09%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.37%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.85%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.81%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps3 1621 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.95%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.16%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.85%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.73%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps3 314 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons22.55%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons20.38%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons43.21%MediumIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons43.94%MediumIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion rps3 497 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons32.41%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons31.05%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons51.51%MediumIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons50.41%MediumIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion rps3 503 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.52%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.73%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.97%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.48%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps3 64 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.58%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons97.01%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.86%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons98.66%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps3 69 CDS NA NA NA NA C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons79.26%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.74%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons57.00%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons58.13%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion rps3 707 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons34.34%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons34.51%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.01%HighIncreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.44%HighIncreased31374076
Zea mays GRMZM5G849971 Mitochondrion rps3 878 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.10%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.87%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons16.26%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons17.84%PoorSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps3 92 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.86%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.42%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.45%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons99.49%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps4 1031 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.11%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.12%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.62%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons92.30%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps4 1040 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons84.99%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.42%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.44%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.62%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps4 1045 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.92%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.65%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons72.88%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons79.24%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps4 164 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons59.61%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons64.67%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons50.17%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons46.18%MediumSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps4 278 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons87.59%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.55%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.03%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons95.83%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps4 290 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons71.54%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.43%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons64.62%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.97%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps4 335 CDS NA NA NA NA C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.58%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.64%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.85%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons91.06%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps4 38 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons72.38%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons71.76%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons67.20%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons64.53%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps4 482 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons66.09%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons58.90%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons68.58%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons72.11%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps4 49 CDS NA NA NA NA C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.05%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.26%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons88.01%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons96.11%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps4 549 CDS NA NA NA NA C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons43.85%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons49.91%MediumNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons23.55%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons35.18%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion rps4 870 CDS NA NA NA NA C-to-U ACC=>ACU T=>T Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons16.76%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons24.63%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.00%UneditedAbsent31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons0.00%UneditedAbsent31374076
Zea mays GRMZM5G849971 Mitochondrion rps4 915 CDS NA NA NA NA C-to-U AUC=>AUU I=>I Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons83.17%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.60%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons76.12%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons86.69%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps4 944 CDS NA NA NA NA C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons54.98%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons63.41%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons56.70%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons59.21%MediumSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps4 955 CDS NA NA NA NA C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons80.44%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons74.93%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons78.85%HighSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons81.62%HighSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps4 980 CDS NA NA NA NA C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons79.06%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons75.34%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons47.85%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons50.47%MediumDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion rps4 NA 5'UTR NA NA NA -9 C-to-U CAA=>UAA NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons49.19%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons63.62%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons40.31%MediumSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons55.58%MediumSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps7 277 CDS NA NA NA NA C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons54.65%MediumNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons61.13%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons31.76%LowDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons30.39%LowDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion rps7 332 CDS NA NA NA NA C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons77.31%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons82.97%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons60.39%HighDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons63.76%HighDecreased31374076
Zea mays GRMZM5G849971 Mitochondrion rps7 520 CDS NA NA NA NA C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons11.99%PoorNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons36.95%LowNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons11.72%PoorSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons20.87%LowSimilar31374076
Zea mays GRMZM5G849971 Mitochondrion rps7 NA 5'UTR NA NA NA -114
-68
C-to-U CCU=>UCU
UCG=>UUG
NA=>NA Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons30.84%LowNone31374076
W22WT-1ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons64.09%HighNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons30.98%LowNone31374076
W22WT-2ControlControlControlNormalKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons70.86%HighNone31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons26.24%LowSimilar31374076
W22emp21-1Mutator (Mu) insertionA Mu insertion at +280 bp from the translation start codon in GRMZM5G849971HeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons52.32%MediumDecreased31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons23.34%LowSimilar31374076
W22emp21-2Mutator (Mu) insertionThe Mu element is inserted at +608 bp from the GRMZM5G849971 translation start codonHeterozygousEmpty pericarpKernel12 DAPSTS-PCRseq; Direct sequencing of RT-PCR amplicons46.97%MediumDecreased31374076
Last update: Feb 2026 (version 2.0)