| Zea mays |
GRMZM2G158645 |
Mitochondrion |
atp1
|
1178 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 97.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 18.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 96.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
atp1
|
1490 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCU=>CUU |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 97.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 18.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 97.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 7.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
atp4
|
40 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CUA=>UUA |
L=>L |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 94.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 94.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
atp4
|
71 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 89.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 86.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
atp6
|
279 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 41.00% | Medium | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 67.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 41.00% | Medium | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 69.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
atp6
|
515 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCU=>UUU |
S=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 93.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 7.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 94.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
atp6
|
525 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 7.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 48.00% | Medium | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 6.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 45.00% | Medium | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
atp6
|
584 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 96.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 28.00% | Low | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 96.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 13.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
atp6
|
737, 738 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 97%, 94% | High, High | None, None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 24%, 44% | Low, Mediu | Decreased, | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 97%, 93% | High, High | None, None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 14%, 38% | Poor, Low | Decreased, | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
atp6
|
931 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CAU=>UAU |
H=>Y |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 97.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 11.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 97.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
atp6
|
953 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 95.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 12.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 96.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
atp9
|
191 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCA=>CUA |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 92.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 10.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 91.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
atp9
|
212 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 91.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 92.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
atp9
|
228 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 24.00% | Low | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 64.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 22.00% | Low | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 67.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmB
|
172 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 83.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 28.00% | Low | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 81.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 28.00% | Low | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmB
|
181 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCU=>UCU |
P=>S |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 78.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 76.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmB
|
183 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 44.00% | Medium | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 81.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 43.00% | Medium | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 82.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmB
|
193, 194 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCU=>UUU |
P=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 77%, 78% | High, High | None, None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 11%, 0% | Poor, Uned | Decreased, | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 76%, 76% | High, High | None, None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5%, 0% | Poor, Uned | Decreased, | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmB
|
392 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCG=>CUG |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 83.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 81.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmB
|
424 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CGU=>UGU |
R=>C |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 82.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 81.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 4.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmB
|
475 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 64.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 39.00% | Low | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 66.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 46.00% | Medium | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmB
|
476 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 58.00% | Medium | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 60.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmB
|
485 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 61.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 13.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 63.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 14.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmB
|
503 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 69.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 69.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmB
|
566 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCC=>UUC |
S=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 67.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 65.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmB
|
93 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 26.00% | Low | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 65.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 31.00% | Low | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 68.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFc
|
1144 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CUG=>UUG |
L=>L |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 82.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 8.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 77.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 9.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFc
|
119 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCU=>UUU |
S=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 86.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 17.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 89.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 9.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFc
|
123 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 79.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 59.00% | Medium | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 77.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 56.00% | Medium | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFc
|
301 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CGU=>UGU |
R=>C |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 69.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 73.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFc
|
866 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCU=>UUU |
S=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 92.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 15.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 87.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 15.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFc
|
966 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCC=>CCU |
P=>P |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 91.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 89.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFn
|
1214 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 8.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 60.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 7.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 63.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFn
|
1276 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 39.00% | Low | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 2.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 49.00% | Medium | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFn
|
1325 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCA=>CUA |
P=>L |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 90.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 90.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFn
|
1375 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CGG=>UGG |
R=>W |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 78.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 4.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 82.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFn
|
1553 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCU=>UUU |
S=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 81.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 86.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFn
|
181 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 65.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 90.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 65.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 90.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFn
|
287 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 82.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 82.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFn
|
318 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 19.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 50.00% | Medium | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 18.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 52.00% | Medium | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFn
|
514 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 20.00% | Low | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 54.00% | Medium | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 23.00% | Low | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 57.00% | Medium | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFn
|
595 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 55.00% | Medium | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 83.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 58.00% | Medium | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 85.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFn
|
752 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 77.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 6.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 79.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFn
|
76 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 77.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 78.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFn
|
762 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 8.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 55.00% | Medium | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 11.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 53.00% | Medium | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
ccmFn
|
812 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 70.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 76.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
cob
|
1098 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UUC=>UUU |
F=>F |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 33.00% | Low | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 30.00% | Low | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
cob
|
580 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CUU=>UUU |
L=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 93.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 92.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
cob
|
808 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCC=>UCC |
P=>S |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 95.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 12.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 95.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
cob
|
982 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CAC=>UAC |
H=>Y |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 93.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 17.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 92.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 16.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
cox1
|
1489 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCA=>UCA |
P=>S |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 93.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 6.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 93.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
cox2
|
162 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 22.00% | Low | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 60.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 23.00% | Low | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 58.00% | Medium | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
cox2
|
466, 467 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCA=>UUA |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 95%, 95% | High, High | None, None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3%, 0% | Poor, Uned | Decreased, | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 95%, 95% | High, High | None, None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3%, 0% | Poor, Uned | Decreased, | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
cox2
|
482 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 71.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 39.00% | Low | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 71.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 38.00% | Low | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
cox2
|
550 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 95.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 9.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 96.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 7.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
cox2
|
563 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCU=>CUU |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 91.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 92.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
cox2
|
620 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 49.00% | Medium | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 47.00% | Medium | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
cox2
|
638 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 21.00% | Low | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 48.00% | Medium | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 22.00% | Low | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 50.00% | Medium | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
cox3
|
566 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCC=>UUC |
S=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 87.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 82.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
cox3
|
657 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 12.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 43.00% | Medium | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 10.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 42.00% | Medium | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
matR
|
1038 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 7.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 26.00% | Low | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 6.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 29.00% | Low | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
matR
|
1124 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 83.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 32.00% | Low | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 83.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 36.00% | Low | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
matR
|
1730 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 68.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 93.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 58.00% | Medium | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 93.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
matR
|
1751 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCU=>CUU |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 70.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 7.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 64.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 8.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
matR
|
1785 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 23.00% | Low | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 73.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 17.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 77.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
matR
|
1877 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 76.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 67.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
matR
|
1885 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCC=>UCC |
P=>S |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 74.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 23.00% | Low | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 72.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 25.00% | Low | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
matR
|
1905 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 67.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 89.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 67.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 92.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
matR
|
86 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCC=>CUC |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 56.00% | Medium | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 51.00% | Medium | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
matR
|
92 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 38.00% | Low | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 61.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 34.00% | Low | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 68.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
mttB
|
215 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 15.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 14.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
mttB
|
434 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 13.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 10.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
mttB
|
694 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 16.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 14.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad1
|
138 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 20.00% | Low | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 62.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 21.00% | Low | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 71.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad1
|
154 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 8.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 30.00% | Low | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 10.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 50.00% | Medium | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad1
|
215 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCC=>UUC |
S=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 49.00% | Medium | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 35.00% | Low | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad1
|
537 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 16.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 78.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 13.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 86.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad1
|
571 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CUU=>UUU |
L=>F |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 34.00% | Low | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 15.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad1
|
577 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCG=>CUG |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 89.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 31.00% | Low | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 88.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 12.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad1
|
835 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 11.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 60.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 11.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 69.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad2
|
1057 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 11.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 40.00% | Medium | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 12.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 46.00% | Medium | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad2
|
1212 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 4.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 27.00% | Low | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 4.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 37.00% | Low | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad2
|
1246, 1247 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCA=>UUA
NA=>NA |
P=>L
NA=>NA |
Recoding
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100%, 100% | Complete, | None, None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 20%, 13% | Low, Poor | Decreased, | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100%, 100% | Complete, | None, None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 10%, 5% | Poor, Poor | Decreased, | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad2
|
303 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 23.00% | Low | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 43.00% | Medium | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 27.00% | Low | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 48.00% | Medium | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad2
|
361 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCU=>UCU |
P=>S |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 37.00% | Low | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 36.00% | Low | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad2
|
388 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCG=>UCG |
P=>S |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 10.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 6.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad2
|
453 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 33.00% | Low | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 81.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 41.00% | Medium | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 83.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad2
|
497 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 71.00% | High | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 74.00% | High | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad2
|
525 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 7.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 42.00% | Medium | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 6.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 47.00% | Medium | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad2
|
962 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
ACU=>AUU |
T=>I |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 11.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad3
|
247 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 60.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 36.00% | Low | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 61.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 38.00% | Low | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad3
|
79 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 7.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 27.00% | Low | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 10.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 32.00% | Low | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad4
|
1152 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 8.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 35.00% | Low | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 9.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 92.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad4
|
156 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 12.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 37.00% | Low | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 22.00% | Low | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 59.00% | Medium | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad4
|
30 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 8.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 49.00% | Medium | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 9.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 57.00% | Medium | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad4
|
77 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 68.00% | High | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 38.00% | Low | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad4
|
819 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 28.00% | Low | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 71.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 28.00% | Low | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 93.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad4
|
84 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 37.00% | Low | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 67.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 35.00% | Low | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 82.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad4L
|
110 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 51.00% | Medium | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 22.00% | Low | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 53.00% | Medium | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 21.00% | Low | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad4L
|
179 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 19.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 17.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad5
|
1490 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCC=>CUC |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad5
|
1580 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 19.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 13.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad5
|
1901 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 83.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 26.00% | Low | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 83.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 24.00% | Low | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad6
|
-3 |
NA |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 23.00% | Low | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 18.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad6
|
138 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 53.00% | Medium | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 79.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 45.00% | Medium | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 79.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad6
|
159 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 19.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 43.00% | Medium | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 14.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 38.00% | Low | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad6
|
169 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CAU=>UAU |
H=>Y |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 96.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 96.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad6
|
191 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 96.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 11.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 96.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad7
|
1103 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 57.00% | Medium | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 63.00% | High | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad7
|
1124 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCA=>CUA |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 9.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 7.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad7
|
1137 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 21.00% | Low | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 26.00% | Low | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad7
|
255 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 52.00% | Medium | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 82.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 50.00% | Medium | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 84.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad7
|
445 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCG=>UCG |
P=>S |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 7.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad7
|
534 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 13.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 62.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 13.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 68.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad7
|
926 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 18.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 8.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad7
|
963 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 22.00% | Low | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 76.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 14.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 76.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad7
|
973 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCU=>UCU |
P=>S |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 13.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 100.00% | Complete | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 6.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad7
|
99 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 47.00% | Medium | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 86.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 48.00% | Medium | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 86.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad9
|
111 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 15.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 14.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad9
|
223 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CAU=>UAU |
H=>Y |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 80.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 70.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
nad9
|
298 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCG=>UCG |
P=>S |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 81.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 71.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rpl16
|
184 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CGC=>UGC |
R=>C |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 90.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 8.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 90.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rpl16
|
228 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 67.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 91.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 55.00% | Medium | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 92.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rpl16
|
287 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
ACA=>AUA |
T=>I |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 81.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 83.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rpl16
|
291 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 8.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 34.00% | Low | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 9.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 39.00% | Low | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rpl16
|
444 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCC=>UCU |
S=>S |
Synonymous |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 15.00% | Poor | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 17.00% | Poor | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rpl16
|
524 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 87.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 8.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 85.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rpl16
|
79 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CAG=>UAG |
Q=>Stop codon |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 89.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 8.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 88.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 11.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rps1
|
377 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 85.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 82.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rps12
|
221 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 74.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 43.00% | Medium | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 77.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 50.00% | Medium | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rps13
|
256 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CGU=>UGU |
R=>C |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 79.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 79.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rps13
|
56 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 74.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 6.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 69.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rps2A
|
449 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
GCA=>GUA |
A=>V |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 82.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 89.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rps2A
|
514 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCU=>UCU |
P=>S |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 77.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 86.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 5.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rps2B
|
455 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
GCA=>GUA |
A=>V |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 91.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 3.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 92.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rps3
|
1066 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CGG=>UGG |
R=>W |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 25.00% | Low | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 27.00% | Low | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rps3
|
1607 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 94.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 9.00% | Poor | Decreased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 96.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 9.00% | Poor | Decreased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rps3
|
707 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 35.00% | Low | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 88.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 28.00% | Low | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 88.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rps4
|
1031 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 42.00% | Medium | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 68.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 48.00% | Medium | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 81.00% | High | Increased | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rps4
|
164 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 55.00% | Medium | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 54.00% | Medium | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rps4
|
38 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CCA=>CUA |
P=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 77.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 76.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rps4
|
482 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
UCA=>UUA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 71.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 62.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rps4
|
955 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
CAU=>UAU |
H=>Y |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 79.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 78.00% | High | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rps7
|
-68 |
NA |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 66.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 49.00% | Medium | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 0.00% | Unedited | Absent | 36200865 |
|
| Zea mays |
GRMZM2G158645 |
Mitochondrion |
rps7
|
277 |
CDS |
Maizegdb database (www.maizegdb.org) |
NA |
NA |
NA |
C-to-U |
NA=>NA |
NA=>NA |
NA |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT-1 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 73.00% | High | None | 36200865 | | NA | pcw1-1 | Nucleotide deletion | A deletion of 775C from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-1 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 92.00% | High | Increased | 36200865 | | NA | WT-2 | Control | Control | No mutant | Normal | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 54.00% | Medium | None | 36200865 | | NA | pcw1-2 | Nucleotide deletion | A deletion of two bases of AT from position 161 from the start codon in PCW1 | Recessive; Homozygous | The pcw1-2 mutant kernels at 12 DAP with an invisible embryo and a tiny drop-shaped endosperm were much smaller than wild-type kernels | Kernel | 12 DAP | Strand- and transcript-specific RNA-seq (STS-PCR-seq) | 88.00% | High | Increased | 36200865 |
|
